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The map label for this gene is 41408876

Identifier: 41408876

GI number: 41408876

Start: 3110088

End: 3110765

Strand: Reverse

Name: 41408876

Synonym: MAP2778c

Alternate gene names: NA

Gene position: 3110765-3110088 (Counterclockwise)

Preceding gene: 41408883

Following gene: 41408875

Centisome position: 64.41

GC content: 66.52

Gene sequence:

>678_bases
ATGGTTACCGTGACGGCAAAAGGGCCCGGCGCCCCGATCGTTTCCGGGGATCCGATCCTGGGCATCGTGGTCGACATGCT
CGACACCGGGGGCTACGAGGCCGTGCAGCTGCGCGAGGTGGCCCGGCGGGCCCGCGTCTCGATGGCCACCATCTACAAGC
GCTATCGCACCCGCGACGAGCTCATCGTGGCGGCCCTGGAGGGGTGGATGGACGCCAACCGGTATGCGCGGTTGCCGTCG
CTGATCGACGAGCTGCCCGGCGAATCGATGTATTCCGACCTCATGCACGTAATGCGGACCATCTTCGAGCCGTGGGAGCG
GCATCCGCTGATGCTGCGCTCCTACTTTCAGGCGCGCTCCGGGCCCGGCGGTAAACGCCTGATCCGGCGCGGTGTCGAGG
CCGTCGTTCCTGTCGCGAAAAGCGTTCTGGCCCAGGCTGATCCGGGATTCGTCAACGATCTGGAGCTCATCCTCACCGGT
GTGGTGTTCGGGTTTCTGACCCGCTTCGCCCAGGGCGAGATCGAGGTCACCGAGATCGTGCCCGGCATCGAGCGCACGGT
GTACTGGCTCACCCAGGCCTACCAGAACGCCGATGCCGGCCGGCAACCTCACATCAGCGGCGGCGGGATCAGCCAGCCCA
GCGAGGGGTCGACGTCGTCCTTGTACTGCGGGCAGTAG

Upstream 100 bases:

>100_bases
GACTTTGCCATCTAGTGAACCCACGGCGGGCGTCCTCGTTTCTTGTCCGGCGGCCCAGTTCAGGGGTGAGTAACGTGGTT
ACTCACCCGCGCACAGTAAC

Downstream 100 bases:

>100_bases
CTGGCGACCGAAAGACCGATGAAGTAGCCGGATTGCTTCGGCGTCAACGGGGTTTGCTTGGTCAGCCGCAGCGCCAGCAT
CGACACGTTGGGGTTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVTVTAKGPGAPIVSGDPILGIVVDMLDTGGYEAVQLREVARRARVSMATIYKRYRTRDELIVAALEGWMDANRYARLPS
LIDELPGESMYSDLMHVMRTIFEPWERHPLMLRSYFQARSGPGGKRLIRRGVEAVVPVAKSVLAQADPGFVNDLELILTG
VVFGFLTRFAQGEIEVTEIVPGIERTVYWLTQAYQNADAGRQPHISGGGISQPSEGSTSSLYCGQ

Sequences:

>Translated_225_residues
MVTVTAKGPGAPIVSGDPILGIVVDMLDTGGYEAVQLREVARRARVSMATIYKRYRTRDELIVAALEGWMDANRYARLPS
LIDELPGESMYSDLMHVMRTIFEPWERHPLMLRSYFQARSGPGGKRLIRRGVEAVVPVAKSVLAQADPGFVNDLELILTG
VVFGFLTRFAQGEIEVTEIVPGIERTVYWLTQAYQNADAGRQPHISGGGISQPSEGSTSSLYCGQ
>Mature_225_residues
MVTVTAKGPGAPIVSGDPILGIVVDMLDTGGYEAVQLREVARRARVSMATIYKRYRTRDELIVAALEGWMDANRYARLPS
LIDELPGESMYSDLMHVMRTIFEPWERHPLMLRSYFQARSGPGGKRLIRRGVEAVVPVAKSVLAQADPGFVNDLELILTG
VVFGFLTRFAQGEIEVTEIVPGIERTVYWLTQAYQNADAGRQPHISGGGISQPSEGSTSSLYCGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24730; Mature: 24730

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVTAKGPGAPIVSGDPILGIVVDMLDTGGYEAVQLREVARRARVSMATIYKRYRTRDE
CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVAALEGWMDANRYARLPSLIDELPGESMYSDLMHVMRTIFEPWERHPLMLRSYFQARS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GPGGKRLIRRGVEAVVPVAKSVLAQADPGFVNDLELILTGVVFGFLTRFAQGEIEVTEIV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHC
PGIERTVYWLTQAYQNADAGRQPHISGGGISQPSEGSTSSLYCGQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTVTAKGPGAPIVSGDPILGIVVDMLDTGGYEAVQLREVARRARVSMATIYKRYRTRDE
CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVAALEGWMDANRYARLPSLIDELPGESMYSDLMHVMRTIFEPWERHPLMLRSYFQARS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GPGGKRLIRRGVEAVVPVAKSVLAQADPGFVNDLELILTGVVFGFLTRFAQGEIEVTEIV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHC
PGIERTVYWLTQAYQNADAGRQPHISGGGISQPSEGSTSSLYCGQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA