Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408874

Identifier: 41408874

GI number: 41408874

Start: 3107656

End: 3108909

Strand: Reverse

Name: 41408874

Synonym: MAP2776c

Alternate gene names: NA

Gene position: 3108909-3107656 (Counterclockwise)

Preceding gene: 41408875

Following gene: 41408872

Centisome position: 64.37

GC content: 66.99

Gene sequence:

>1254_bases
CTGGACCGTTACATCGTCATCTCGACGGACACTCACGCCGGGGCGGATCTCTACGGCTACAAACCGTATCTGCCGGCGCG
GCTGCACGACGAGTTCGACGCCTGGGCCAAGGCGTACGCCAGCCCGTTCGACGACCTGATCGTCGCCACCGCCAACCGGA
ACTGGGACCACGAGCTGCGGATCGGCGAGATGGACGCCGACGGGGTGGCCGCAGAGGTGTTGCTGCCCAACACCGTTCCG
CCGTTCTTCCCGACCACGCCGAACATCACCATCAGCCTGCCCCGCACTCGCGCGGAGTTCGAAAAGCGTTGGGCCGGTGT
GCAGGCGCACAACCGGTGGCAGGTCGATTTCTGTTCGCTGGCTCCCGACCGGCGCCGCGGGTTGATCCAGATCTTCCCCA
ACGACGTCGAGTTGGCGATGGAGGAAATCCGTTGGGGCGCGCGGCAGGACTGCTTCGGCGGTGTGCTGATTCCGCCGGTC
TCGCCCGGCGATTCGCAGGTGGCCCCGCTTTTCCACACCCACTACGAACCGCTGTGGGCCCTGTGTGCCGAACTGGACCT
CACCGTGGTGCAGCACGCGGGGGCCGGCAGCCCGGAGATGCCGATGGACCAGCCGGCGTCCAATGCCGTGTTGATCACCG
AGATGGCACTGTGGGCCCAGCGGACCCTCGGCCACCTGATCCTGGCCGGTGTGTTCGAACGGTATCCGACGCTGCGGTTC
GTGCCGACCGAGCAGGGAACCCTGTGGGTGCCGGCACAACTCGGCGTCCTCGACGCCATGGTGCCCACCATGAAATCCGA
TGCGCACAACCGCACCTACGGGATGTTCGGCGGCTCGTCGGTCGACGCGCTGACCCTGACGCCCAGCGAATACGTCCAGC
GCAACTGCTATCTGGCCAGCGAGCTGATGCCCTACGACGGCGCGATGATCGACTTCATGGGGCCCGATCACATCATGTGG
GGCAGTGACTATCCGCACGAGGAAGGCTTTGCGCCGCACTCGAAGTTGGCCATCCGCTGGGCGCTGCACGACCGGCCCGA
GGATGCCTGCCGAAAGATCTTGGGCGGCAACGCCGCTCGGCTCTACCGTTTCGACCTCGACAAGCTGATTCCGGTGGCCG
CCAAGATCGGGCCCACGGTCGAGGAGGTGCGCACCCCGGTGCCGGACACCGGCTATCGCGCCCCGGCCGCGTTCGGCTAC
CGGCCCTTCGAAGGCGGGCTGGCGCTCAAGCGGCTGGCGCCGCAACGCGGTTAA

Upstream 100 bases:

>100_bases
TGCTCCCACCCAGCGGAACGGAACACGCTGGTATCACCGGGGCTTCTCCCTATACTCGACCTGATTCATGGAGGGCGCGA
TGGCTACAACCTGGGACACG

Downstream 100 bases:

>100_bases
CCGGACTCGTCGGCAAGGGCTTCGCTCAGCCGGCGGGTCGCGGCGGCCAGCTGGGTACCCAGCCGGGTGACCGCCGCGCC
GCTCATCGGCTCGGCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Amidase; Metal-Dependent Hydrolase; Barh Protein; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; Minocarboxymuconate-Semialdehyde Decarboxylase.; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MDRYIVISTDTHAGADLYGYKPYLPARLHDEFDAWAKAYASPFDDLIVATANRNWDHELRIGEMDADGVAAEVLLPNTVP
PFFPTTPNITISLPRTRAEFEKRWAGVQAHNRWQVDFCSLAPDRRRGLIQIFPNDVELAMEEIRWGARQDCFGGVLIPPV
SPGDSQVAPLFHTHYEPLWALCAELDLTVVQHAGAGSPEMPMDQPASNAVLITEMALWAQRTLGHLILAGVFERYPTLRF
VPTEQGTLWVPAQLGVLDAMVPTMKSDAHNRTYGMFGGSSVDALTLTPSEYVQRNCYLASELMPYDGAMIDFMGPDHIMW
GSDYPHEEGFAPHSKLAIRWALHDRPEDACRKILGGNAARLYRFDLDKLIPVAAKIGPTVEEVRTPVPDTGYRAPAAFGY
RPFEGGLALKRLAPQRG

Sequences:

>Translated_417_residues
MDRYIVISTDTHAGADLYGYKPYLPARLHDEFDAWAKAYASPFDDLIVATANRNWDHELRIGEMDADGVAAEVLLPNTVP
PFFPTTPNITISLPRTRAEFEKRWAGVQAHNRWQVDFCSLAPDRRRGLIQIFPNDVELAMEEIRWGARQDCFGGVLIPPV
SPGDSQVAPLFHTHYEPLWALCAELDLTVVQHAGAGSPEMPMDQPASNAVLITEMALWAQRTLGHLILAGVFERYPTLRF
VPTEQGTLWVPAQLGVLDAMVPTMKSDAHNRTYGMFGGSSVDALTLTPSEYVQRNCYLASELMPYDGAMIDFMGPDHIMW
GSDYPHEEGFAPHSKLAIRWALHDRPEDACRKILGGNAARLYRFDLDKLIPVAAKIGPTVEEVRTPVPDTGYRAPAAFGY
RPFEGGLALKRLAPQRG
>Mature_417_residues
MDRYIVISTDTHAGADLYGYKPYLPARLHDEFDAWAKAYASPFDDLIVATANRNWDHELRIGEMDADGVAAEVLLPNTVP
PFFPTTPNITISLPRTRAEFEKRWAGVQAHNRWQVDFCSLAPDRRRGLIQIFPNDVELAMEEIRWGARQDCFGGVLIPPV
SPGDSQVAPLFHTHYEPLWALCAELDLTVVQHAGAGSPEMPMDQPASNAVLITEMALWAQRTLGHLILAGVFERYPTLRF
VPTEQGTLWVPAQLGVLDAMVPTMKSDAHNRTYGMFGGSSVDALTLTPSEYVQRNCYLASELMPYDGAMIDFMGPDHIMW
GSDYPHEEGFAPHSKLAIRWALHDRPEDACRKILGGNAARLYRFDLDKLIPVAAKIGPTVEEVRTPVPDTGYRAPAAFGY
RPFEGGLALKRLAPQRG

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46411; Mature: 46411

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRYIVISTDTHAGADLYGYKPYLPARLHDEFDAWAKAYASPFDDLIVATANRNWDHELR
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEE
IGEMDADGVAAEVLLPNTVPPFFPTTPNITISLPRTRAEFEKRWAGVQAHNRWQVDFCSL
EECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEEEECC
APDRRRGLIQIFPNDVELAMEEIRWGARQDCFGGVLIPPVSPGDSQVAPLFHTHYEPLWA
CCHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHCHHHHHH
LCAELDLTVVQHAGAGSPEMPMDQPASNAVLITEMALWAQRTLGHLILAGVFERYPTLRF
HHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VPTEQGTLWVPAQLGVLDAMVPTMKSDAHNRTYGMFGGSSVDALTLTPSEYVQRNCYLAS
EECCCCCEEECHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECHHHHHHHCCEEHH
ELMPYDGAMIDFMGPDHIMWGSDYPHEEGFAPHSKLAIRWALHDRPEDACRKILGGNAAR
HCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEE
LYRFDLDKLIPVAAKIGPTVEEVRTPVPDTGYRAPAAFGYRPFEGGLALKRLAPQRG
EEEECHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MDRYIVISTDTHAGADLYGYKPYLPARLHDEFDAWAKAYASPFDDLIVATANRNWDHELR
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEE
IGEMDADGVAAEVLLPNTVPPFFPTTPNITISLPRTRAEFEKRWAGVQAHNRWQVDFCSL
EECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEEEECC
APDRRRGLIQIFPNDVELAMEEIRWGARQDCFGGVLIPPVSPGDSQVAPLFHTHYEPLWA
CCHHHCCEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHCHHHHHH
LCAELDLTVVQHAGAGSPEMPMDQPASNAVLITEMALWAQRTLGHLILAGVFERYPTLRF
HHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VPTEQGTLWVPAQLGVLDAMVPTMKSDAHNRTYGMFGGSSVDALTLTPSEYVQRNCYLAS
EECCCCCEEECHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECHHHHHHHCCEEHH
ELMPYDGAMIDFMGPDHIMWGSDYPHEEGFAPHSKLAIRWALHDRPEDACRKILGGNAAR
HCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEE
LYRFDLDKLIPVAAKIGPTVEEVRTPVPDTGYRAPAAFGYRPFEGGLALKRLAPQRG
EEEECHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA