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The map label for this gene is dedA [C]

Identifier: 41408838

GI number: 41408838

Start: 3072586

End: 3073251

Strand: Direct

Name: dedA [C]

Synonym: MAP2740

Alternate gene names: 41408838

Gene position: 3072586-3073251 (Clockwise)

Preceding gene: 41408837

Following gene: 41408840

Centisome position: 63.62

GC content: 70.12

Gene sequence:

>666_bases
ATGAACGTGGAGCCCTTGCTGCACTCGATCCCGCCGCTCGCGGTTTATCTGGTGGTCGGCGGTGTGGTCGGGATCGAGAG
CCTGGGCATTCCGCTGCCAGGCGAGATCGTGCTGGTCACCGCGGCGTTGATGTCGTCGCATCACGACCTGGCCGTCAATC
CGCTCGGTGTCGGCGTCGCCGCGGTGATCGGGGCGGTGATCGGCGATTCGATCGGCTACGCGGTGGGGCGGCGGTTCGGC
ATGCCGCTGTTCGAGCGGCTCGGCCGGCGGTTTCCCAAACACTTCGGTCCCGGACACGTCGCGCTCGCCGAGAAGTTGTT
CAACCGGTGGGGCGCGCGGGCCGTCTTCCTGGGCCGCTTCATCGCGCTGCTGCGGATCCTGGCCGGGCCGCTGGCCGGCG
CGCTGAAGATGCACTACCCGCGGTTCCTGACGGCCAACGTCTCCGGCGCCATCTGCTGGGCGGGCGGCACCACCGCGCTG
GTCTATTTCGCCGGGGTGGCCGCCGAGCGCTGGCTGGAGCGGTTCTCCTGGATCGGGCTGGTGGTCGCCGTGGTGGCCGG
GCTGACGGCGGCAATCCTGTTGCGGGAGCGCACCTCCCGGGCGATCGCCGAGCTGGAGGCCGAGCATTACCGCAAGACCG
GCAACACCGCGACCGACCCGGTCTGA

Upstream 100 bases:

>100_bases
GGGTCTGGCGGCGGCTGCGCGGGCTCTCGTCGTACGACGGGCGCGAACCCAAACGTCCGCGGCTGCAGGGTGTGGGCAGC
GCATCAGGCATCCTTGACGC

Downstream 100 bases:

>100_bases
CTACACCGCCTCGCCGGTGTCGGACACCAGCGGCGGCCGGTGTTCCTCGATCAGGGTGCGGGCCATCCGGCGGGCGCGCC
GCGCGGCGTCGAGGTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNVEPLLHSIPPLAVYLVVGGVVGIESLGIPLPGEIVLVTAALMSSHHDLAVNPLGVGVAAVIGAVIGDSIGYAVGRRFG
MPLFERLGRRFPKHFGPGHVALAEKLFNRWGARAVFLGRFIALLRILAGPLAGALKMHYPRFLTANVSGAICWAGGTTAL
VYFAGVAAERWLERFSWIGLVVAVVAGLTAAILLRERTSRAIAELEAEHYRKTGNTATDPV

Sequences:

>Translated_221_residues
MNVEPLLHSIPPLAVYLVVGGVVGIESLGIPLPGEIVLVTAALMSSHHDLAVNPLGVGVAAVIGAVIGDSIGYAVGRRFG
MPLFERLGRRFPKHFGPGHVALAEKLFNRWGARAVFLGRFIALLRILAGPLAGALKMHYPRFLTANVSGAICWAGGTTAL
VYFAGVAAERWLERFSWIGLVVAVVAGLTAAILLRERTSRAIAELEAEHYRKTGNTATDPV
>Mature_221_residues
MNVEPLLHSIPPLAVYLVVGGVVGIESLGIPLPGEIVLVTAALMSSHHDLAVNPLGVGVAAVIGAVIGDSIGYAVGRRFG
MPLFERLGRRFPKHFGPGHVALAEKLFNRWGARAVFLGRFIALLRILAGPLAGALKMHYPRFLTANVSGAICWAGGTTAL
VYFAGVAAERWLERFSWIGLVVAVVAGLTAAILLRERTSRAIAELEAEHYRKTGNTATDPV

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=137, Percent_Identity=32.1167883211679, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23464; Mature: 23464

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVEPLLHSIPPLAVYLVVGGVVGIESLGIPLPGEIVLVTAALMSSHHDLAVNPLGVGVA
CCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
AVIGAVIGDSIGYAVGRRFGMPLFERLGRRFPKHFGPGHVALAEKLFNRWGARAVFLGRF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH
IALLRILAGPLAGALKMHYPRFLTANVSGAICWAGGTTALVYFAGVAAERWLERFSWIGL
HHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VVAVVAGLTAAILLRERTSRAIAELEAEHYRKTGNTATDPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNVEPLLHSIPPLAVYLVVGGVVGIESLGIPLPGEIVLVTAALMSSHHDLAVNPLGVGVA
CCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
AVIGAVIGDSIGYAVGRRFGMPLFERLGRRFPKHFGPGHVALAEKLFNRWGARAVFLGRF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH
IALLRILAGPLAGALKMHYPRFLTANVSGAICWAGGTTALVYFAGVAAERWLERFSWIGL
HHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VVAVVAGLTAAILLRERTSRAIAELEAEHYRKTGNTATDPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]