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The map label for this gene is 41408840

Identifier: 41408840

GI number: 41408840

Start: 3074023

End: 3074460

Strand: Direct

Name: 41408840

Synonym: MAP2742

Alternate gene names: NA

Gene position: 3074023-3074460 (Clockwise)

Preceding gene: 41408838

Following gene: 41408844

Centisome position: 63.65

GC content: 68.26

Gene sequence:

>438_bases
ATGAATTCAGTCATTGTGGAACCGATGTCCGCCACGCACCTGACGCTGAGCACCAAACTCGTCTACGAACTGGGCGACCC
CAACAGCACACTGCGGGCGACGACCGCGCGCAGCGGCTCCGCGGTGCTGATCTATGCGGGCGGCGAGATCGACGCGTGCA
ACGAGGACACCTGGCGCCACCTGGTCAGCGAGGCCGCCGGCGTCGTCACCACGCCTGGGCCGTTCGTGGTCGACGTCACC
GGCCTGGAGTTCATGGGGTGCTGCGCGTTCGCCGTGCTCACCGACGAGGCGAAACGCTGCCGACAGCGCGGCATCGACCT
GCGGCTGGTGAGCTGCGAGCCGATCGTCGGCCGCATCATCGACGCGTGCGGGCTGTCGGACATCCTGCCGATCTACCCCA
CGGTCGACTCCGCGCTGTCCGGCGCCGACCGCTGGTGA

Upstream 100 bases:

>100_bases
GTTATACAAAGAAATTCGCCTAGGCGAACAGTCTGTCTTCAGACAGAAGGACGGGCATCCATTCGAGGCGCTCCCGCGCC
TGTCGATTAGGGGGTCCATC

Downstream 100 bases:

>100_bases
GCACCGGGTAGCACCAAAACCTTTGCTGCAGCGGCTGTTTCGTCATGCCACCGCGAGCAGTCGGTAGAGCCCGATCAGCC
CCACCACAACGATGATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNSVIVEPMSATHLTLSTKLVYELGDPNSTLRATTARSGSAVLIYAGGEIDACNEDTWRHLVSEAAGVVTTPGPFVVDVT
GLEFMGCCAFAVLTDEAKRCRQRGIDLRLVSCEPIVGRIIDACGLSDILPIYPTVDSALSGADRW

Sequences:

>Translated_145_residues
MNSVIVEPMSATHLTLSTKLVYELGDPNSTLRATTARSGSAVLIYAGGEIDACNEDTWRHLVSEAAGVVTTPGPFVVDVT
GLEFMGCCAFAVLTDEAKRCRQRGIDLRLVSCEPIVGRIIDACGLSDILPIYPTVDSALSGADRW
>Mature_145_residues
MNSVIVEPMSATHLTLSTKLVYELGDPNSTLRATTARSGSAVLIYAGGEIDACNEDTWRHLVSEAAGVVTTPGPFVVDVT
GLEFMGCCAFAVLTDEAKRCRQRGIDLRLVSCEPIVGRIIDACGLSDILPIYPTVDSALSGADRW

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 15446; Mature: 15446

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVIVEPMSATHLTLSTKLVYELGDPNSTLRATTARSGSAVLIYAGGEIDACNEDTWRH
CCCEEECCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHH
LVSEAAGVVTTPGPFVVDVTGLEFMGCCAFAVLTDEAKRCRQRGIDLRLVSCEPIVGRII
HHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
DACGLSDILPIYPTVDSALSGADRW
HHCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MNSVIVEPMSATHLTLSTKLVYELGDPNSTLRATTARSGSAVLIYAGGEIDACNEDTWRH
CCCEEECCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHH
LVSEAAGVVTTPGPFVVDVTGLEFMGCCAFAVLTDEAKRCRQRGIDLRLVSCEPIVGRII
HHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
DACGLSDILPIYPTVDSALSGADRW
HHCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]