| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408837
Identifier: 41408837
GI number: 41408837
Start: 3071699
End: 3072589
Strand: Direct
Name: 41408837
Synonym: MAP2739
Alternate gene names: NA
Gene position: 3071699-3072589 (Clockwise)
Preceding gene: 41408835
Following gene: 41408838
Centisome position: 63.6
GC content: 70.93
Gene sequence:
>891_bases CTGGCCCGGCGACTCGCGCACGCTTGGCTGGCATGGCTCCACGGTAACCAGTCGCCGGCCCGGCTTCGCGTTATTCTCGG CTTCGTGAGCGGGGCCATTCACCCTGGATACCGCCGTTACGTCGCCATCGGCGACAGCCAGACCGAGGGCCTGTGGGACG GCGACGACGGCACGGGCCTGCTCGGATTCGCCGACCGCCTCGCCGCGATGCTCGATTCGGCGTATCCCGGGCTGCAATAC GCCAACCTCGCGATCCGCGGCAAACGGATCGGCCACGTGCTGGCCGAGCAGGTCCCGGCGGCCCTGGCGATGCGGCCGGA CCTGATCACGGTGTGCGCCGGCATGAACGACGTCATCCAGCCCGGGCGCTCGTTCGGCCCGGCCCTGACCGACCTGGACC ACATCTACGCCGCGCTGGCCGGATCGGGCGCGACGGTGGTGACGACGACCTTTCCGAACGTCGCGCAGTTCCTGCCGCTG GGCCGGCTGGTAGCCGGGCGGCTGACCCGGATCAACGCGGTCATCCGGGCGGCCGCGAACCGGCACGGGTTCCGGCTGGT CGACCTGTACAGCGCACCGTCGATGCGGGAGTTGAACACCTGGGCCGTCGACCGGGTGCACGCCTCGACCAAGGGGCACA TCTTGTTCGCGGCCGCGGCCGCCGAGGCGCTGAATCTGCCTGAAAGCAGCCATGATTGGGCCCTGGGCGGGCAGCAGCGG GCCCGGCGTTCGGTCGCGGCCGGCGCCTACGAGCAGTGGCGCTGGACGCAGGACAGCTTCGTCCCGTGGGTCTGGCGGCG GCTGCGCGGGCTCTCGTCGTACGACGGGCGCGAACCCAAACGTCCGCGGCTGCAGGGTGTGGGCAGCGCATCAGGCATCC TTGACGCATGA
Upstream 100 bases:
>100_bases TCGGGTTGCTCACCCAGCAGCAGCAACAGCTTGAGCGCGTTGTCGACCGATTCGATTGGATACTGCGGCGCAAGCGCATC GGCGGCCGGCGCGGCCGCGG
Downstream 100 bases:
>100_bases ACGTGGAGCCCTTGCTGCACTCGATCCCGCCGCTCGCGGTTTATCTGGTGGTCGGCGGTGTGGTCGGGATCGAGAGCCTG GGCATTCCGCTGCCAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipolytic; GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; Lipolytic G-D-S-L; Lysophospholipase L1-Like Esterase; GDSL-Like Lipase/Esterase; SGNH Hydrolase; Lipase/Acylhydrolase; SGNH Hydrolase Family Protein; Lipolytic Protein; Gdsl-Like Lipase; Lipase_GDSL Domain-Containing Protein; Lipase; GDSL-Like Lipase/Acylhydrolase; Secreted Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGLLGFADRLAAMLDSAYPGLQY ANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQPGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPL GRLVAGRLTRINAVIRAAANRHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA
Sequences:
>Translated_296_residues MARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGLLGFADRLAAMLDSAYPGLQY ANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQPGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPL GRLVAGRLTRINAVIRAAANRHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA >Mature_295_residues ARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGLLGFADRLAAMLDSAYPGLQYA NLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQPGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPLG RLVAGRLTRINAVIRAAANRHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQRA RRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32091; Mature: 31960
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGL CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCH LGFADRLAAMLDSAYPGLQYANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQ HHHHHHHHHHHHHCCCCCEEEHEEEECHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHC PGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPLGRLVAGRLTRINAVIRAAAN CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCHHH ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA HHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure ARRLAHAWLAWLHGNQSPARLRVILGFVSGAIHPGYRRYVAIGDSQTEGLWDGDDGTGL CHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCH LGFADRLAAMLDSAYPGLQYANLAIRGKRIGHVLAEQVPAALAMRPDLITVCAGMNDVIQ HHHHHHHHHHHHHCCCCCEEEHEEEECHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHC PGRSFGPALTDLDHIYAALAGSGATVVTTTFPNVAQFLPLGRLVAGRLTRINAVIRAAAN CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RHGFRLVDLYSAPSMRELNTWAVDRVHASTKGHILFAAAAAEALNLPESSHDWALGGQQR CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCHHH ARRSVAAGAYEQWRWTQDSFVPWVWRRLRGLSSYDGREPKRPRLQGVGSASGILDA HHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA