| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41408826
Identifier: 41408826
GI number: 41408826
Start: 3062693
End: 3062956
Strand: Direct
Name: 41408826
Synonym: MAP2728
Alternate gene names: NA
Gene position: 3062693-3062956 (Clockwise)
Preceding gene: 41408825
Following gene: 41408832
Centisome position: 63.41
GC content: 70.45
Gene sequence:
>264_bases ATGAATTCACCGAAATGGATGGTTCATTGGCCGCAGCGCAGGCCGACGGCCACCATCTACCAGCTGACCGACCGACTGCA CCGCGGGCATGTCGCCCGGGTGCCCGCCCACCAGATCACGGCGACGGTGTCGGCGTGGCTGGCCGATCTGGGCGCCGACA GCCCGCTGGTCGACGAACTCGAACGCGCGGTGCGCGGCGGCGACTGGGCGGCCGCGCACGCCCTGGGCGAGTGCCTGTCC ATCGAGATCGCGGTGGCCGACTGA
Upstream 100 bases:
>100_bases AAACAACGACCGGCGCAATGGTACACACGTACTATTGTGCTCGAGAGCTGGACGTGTCGCCGGAGTCGAATGAGTCGTTG AGGCTAGCGGGGAGGGGACG
Downstream 100 bases:
>100_bases GACGCCGGATCGCTCACCGCTCGGGACGCACCCGCGCGGCGCGGCGCAGCGTCTCGTCGATCACCCGGTCGACGGCGCCG AAGTAGGTCGGTGACGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MNSPKWMVHWPQRRPTATIYQLTDRLHRGHVARVPAHQITATVSAWLADLGADSPLVDELERAVRGGDWAAAHALGECLS IEIAVAD
Sequences:
>Translated_87_residues MNSPKWMVHWPQRRPTATIYQLTDRLHRGHVARVPAHQITATVSAWLADLGADSPLVDELERAVRGGDWAAAHALGECLS IEIAVAD >Mature_87_residues MNSPKWMVHWPQRRPTATIYQLTDRLHRGHVARVPAHQITATVSAWLADLGADSPLVDELERAVRGGDWAAAHALGECLS IEIAVAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9576; Mature: 9576
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPKWMVHWPQRRPTATIYQLTDRLHRGHVARVPAHQITATVSAWLADLGADSPLVDEL CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH ERAVRGGDWAAAHALGECLSIEIAVAD HHHHCCCCHHHHHHHHHHHEEEEEECC >Mature Secondary Structure MNSPKWMVHWPQRRPTATIYQLTDRLHRGHVARVPAHQITATVSAWLADLGADSPLVDEL CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH ERAVRGGDWAAAHALGECLSIEIAVAD HHHHCCCCHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]