| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408825
Identifier: 41408825
GI number: 41408825
Start: 3061327
End: 3062172
Strand: Direct
Name: 41408825
Synonym: MAP2727
Alternate gene names: NA
Gene position: 3061327-3062172 (Clockwise)
Preceding gene: 41408819
Following gene: 41408826
Centisome position: 63.38
GC content: 73.4
Gene sequence:
>846_bases ATGGCCGCCAACGAACTTCGCACAGGTTCCGAACCTCCGCTCCCCGGGTCGCACCGCGCCGACGAGGCGGTGGCCGGGCA TTGGCTGCTGGCGCGGCTCGGCAAACGGGTACTGCGGCCCGGCGGTGTCGAGCTGACCCGCACCCTGCTGTCCCACGCCC AACTGACCGGCGCCGACGTCGTCGAGCTGGCGCCGGGCCTGGGCCGCACCGCCACCGAGATCGTGGCCCGGGCGCCGCGC TCCTACGTGGGCGCCGAGGCCGACCCCGATGCGGCCAACGTGGTGCGCGGCGTGCTCGGCGATCTCGGTGCGCACAACGC CGCCGTGCGGGTCGCCGACGCGGCCGACACCGGATTGCCCGACGCCAGCGGCGATGTCGTCATCGGCGAGGCGATGCTGA CCATGCAGGGCGATGCGGCCAAGCGGGCGATCGTCGCCGAGGCGGCGCGCGTGCTGCGCCCGGGCGGCCGCTACGCCATC CACGAACTCGCGCTGACGCCGGACACCGTCTCCGAGGAGGTCAGCACCGACATCCGTCGGGCGCTGGCCCGGGCCATCAA GGTGAACGCCCGTCCGTTGACCGTCGCGGAATGGTCGGCGCTGCTGGCCGAGCAAGGATTGGTGGTCGATCACGTCGCGA CCGCGCCGATGGCGCTGCTGCAGCCGCGCCGGCTGGTCTCCGACGAGGGGTTGTTCGGGGCGCTGCGGTTCGCCCGCAAC GTGCTGGTGCACCGCGACGCCCGCAAGCGGGTGCTGACCATGCGCCGCACGTTCCGCAAACATCGCAGGCAACTGGCCGC CGTCGCGATCGTCGCCCACAAGCCGACGGCGTCGCAGACCGGCTGA
Upstream 100 bases:
>100_bases CGGTCCATCACATCGATGCATGGCTTCCCGATCACGTAGGTCATGCGCTAGAGTTTACACAATCAATATTGTAAAAACTA GCCTCAGCGTCGGAGAATCC
Downstream 100 bases:
>100_bases CCGCGGCCGACTTTGGGCCCTTTCCGCAATCGCGGCGTGACGGATTAGTGACGCCCCCTGACGTAACTTGGCTGCGGCGG TCGCGGGAGAACAAAGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MAANELRTGSEPPLPGSHRADEAVAGHWLLARLGKRVLRPGGVELTRTLLSHAQLTGADVVELAPGLGRTATEIVARAPR SYVGAEADPDAANVVRGVLGDLGAHNAAVRVADAADTGLPDASGDVVIGEAMLTMQGDAAKRAIVAEAARVLRPGGRYAI HELALTPDTVSEEVSTDIRRALARAIKVNARPLTVAEWSALLAEQGLVVDHVATAPMALLQPRRLVSDEGLFGALRFARN VLVHRDARKRVLTMRRTFRKHRRQLAAVAIVAHKPTASQTG
Sequences:
>Translated_281_residues MAANELRTGSEPPLPGSHRADEAVAGHWLLARLGKRVLRPGGVELTRTLLSHAQLTGADVVELAPGLGRTATEIVARAPR SYVGAEADPDAANVVRGVLGDLGAHNAAVRVADAADTGLPDASGDVVIGEAMLTMQGDAAKRAIVAEAARVLRPGGRYAI HELALTPDTVSEEVSTDIRRALARAIKVNARPLTVAEWSALLAEQGLVVDHVATAPMALLQPRRLVSDEGLFGALRFARN VLVHRDARKRVLTMRRTFRKHRRQLAAVAIVAHKPTASQTG >Mature_280_residues AANELRTGSEPPLPGSHRADEAVAGHWLLARLGKRVLRPGGVELTRTLLSHAQLTGADVVELAPGLGRTATEIVARAPRS YVGAEADPDAANVVRGVLGDLGAHNAAVRVADAADTGLPDASGDVVIGEAMLTMQGDAAKRAIVAEAARVLRPGGRYAIH ELALTPDTVSEEVSTDIRRALARAIKVNARPLTVAEWSALLAEQGLVVDHVATAPMALLQPRRLVSDEGLFGALRFARNV LVHRDARKRVLTMRRTFRKHRRQLAAVAIVAHKPTASQTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29766; Mature: 29634
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANELRTGSEPPLPGSHRADEAVAGHWLLARLGKRVLRPGGVELTRTLLSHAQLTGADV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH VELAPGLGRTATEIVARAPRSYVGAEADPDAANVVRGVLGDLGAHNAAVRVADAADTGLP HHHCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC DASGDVVIGEAMLTMQGDAAKRAIVAEAARVLRPGGRYAIHELALTPDTVSEEVSTDIRR CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEHEEECCCCHHHHHHHHHHHH ALARAIKVNARPLTVAEWSALLAEQGLVVDHVATAPMALLQPRRLVSDEGLFGALRFARN HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH VLVHRDARKRVLTMRRTFRKHRRQLAAVAIVAHKPTASQTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure AANELRTGSEPPLPGSHRADEAVAGHWLLARLGKRVLRPGGVELTRTLLSHAQLTGADV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH VELAPGLGRTATEIVARAPRSYVGAEADPDAANVVRGVLGDLGAHNAAVRVADAADTGLP HHHCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC DASGDVVIGEAMLTMQGDAAKRAIVAEAARVLRPGGRYAIHELALTPDTVSEEVSTDIRR CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEHEEECCCCHHHHHHHHHHHH ALARAIKVNARPLTVAEWSALLAEQGLVVDHVATAPMALLQPRRLVSDEGLFGALRFARN HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH VLVHRDARKRVLTMRRTFRKHRRQLAAVAIVAHKPTASQTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]