| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is pgsA
Identifier: 41408812
GI number: 41408812
Start: 3049861
End: 3050502
Strand: Reverse
Name: pgsA
Synonym: MAP2714c
Alternate gene names: 41408812
Gene position: 3050502-3049861 (Counterclockwise)
Preceding gene: 41408813
Following gene: 41408811
Centisome position: 63.16
GC content: 73.05
Gene sequence:
>642_bases ATGAGTAAGGTGCCGTTTTTGTCCCGCGCGGCGTTCGCGCGGCTGACGACTCCCACCGCCCGGGCCTGCCTGCGGCTGGG CCTGACCCCCGACGTCGTCACCGTCGCGGGCACCATCGTGGCGGTGGCCGGGGCGCTGATCCTGTTCCCGATCGGCGAGC TGTTCGTCGGCACGCTGGTGGTCTGGTTCTTCGTGCTGTTCGACATGCTCGACGGGGCGATGGCGCGGGAGCGCGGCGGG GGCACCCGGTTCGGCGCGGTGCTGGACGCCACCTGTGACCGGGTCAGCGACGGCGCGGTGTTCGGCGGGCTGCTGTGGTG GGTGGCCTTCGGCCTGCACGACGAACCGTTGGCGGCGGCCACGCTGATCTGCCTGGTCACCTCCCAGGTGATCTCCTACA TCAAGGCCCGGGCCGAGGCCAGCGGGCTGCGCGGCGACGGCGGCATCATCGAGCGGCCCGAGCGGCTGATCATCGTGCTG GTCGGCGCCGGGCTGTCCGACCTTCCCGGCTACCCGCTGCCGTGGGCGCTGCCGGTGGCGATGTGGGCGCTGGCGGCGGC CAGCCTGGTTACCTGCGCGCAGCGGCTGCACACCGTGCGGACCTCGCCGGGCGCCACCGACCGAGGATCGGACGCGCCGT GA
Upstream 100 bases:
>100_bases CACCATCATCGGCGGATCGAAGGTGATCCCGCAGTTGCTGCGCGAAACCCGCCAGCTGCTGGCCACCGAGTGGGCCAAGC AGTCGTGAGCCCACACCGCC
Downstream 100 bases:
>100_bases TGCCCACCCCGCCGGGGATGAGGGCGATCACCGCGCCGGGCCGGCTGGCCGGCCGGCTGGTGGGCGGCGTCGGCGCCGAC TGGGCGTACGCGACGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatidylinositol synthase; PI synthase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSKVPFLSRAAFARLTTPTARACLRLGLTPDVVTVAGTIVAVAGALILFPIGELFVGTLVVWFFVLFDMLDGAMARERGG GTRFGAVLDATCDRVSDGAVFGGLLWWVAFGLHDEPLAAATLICLVTSQVISYIKARAEASGLRGDGGIIERPERLIIVL VGAGLSDLPGYPLPWALPVAMWALAAASLVTCAQRLHTVRTSPGATDRGSDAP
Sequences:
>Translated_213_residues MSKVPFLSRAAFARLTTPTARACLRLGLTPDVVTVAGTIVAVAGALILFPIGELFVGTLVVWFFVLFDMLDGAMARERGG GTRFGAVLDATCDRVSDGAVFGGLLWWVAFGLHDEPLAAATLICLVTSQVISYIKARAEASGLRGDGGIIERPERLIIVL VGAGLSDLPGYPLPWALPVAMWALAAASLVTCAQRLHTVRTSPGATDRGSDAP >Mature_212_residues SKVPFLSRAAFARLTTPTARACLRLGLTPDVVTVAGTIVAVAGALILFPIGELFVGTLVVWFFVLFDMLDGAMARERGGG TRFGAVLDATCDRVSDGAVFGGLLWWVAFGLHDEPLAAATLICLVTSQVISYIKARAEASGLRGDGGIIERPERLIIVLV GAGLSDLPGYPLPWALPVAMWALAAASLVTCAQRLHTVRTSPGATDRGSDAP
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.11 [H]
Molecular weight: Translated: 22305; Mature: 22174
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVPFLSRAAFARLTTPTARACLRLGLTPDVVTVAGTIVAVAGALILFPIGELFVGTLV CCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWFFVLFDMLDGAMARERGGGTRFGAVLDATCDRVSDGAVFGGLLWWVAFGLHDEPLAAA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH TLICLVTSQVISYIKARAEASGLRGDGGIIERPERLIIVLVGAGLSDLPGYPLPWALPVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH MWALAAASLVTCAQRLHTVRTSPGATDRGSDAP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SKVPFLSRAAFARLTTPTARACLRLGLTPDVVTVAGTIVAVAGALILFPIGELFVGTLV CCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWFFVLFDMLDGAMARERGGGTRFGAVLDATCDRVSDGAVFGGLLWWVAFGLHDEPLAAA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH TLICLVTSQVISYIKARAEASGLRGDGGIIERPERLIIVLVGAGLSDLPGYPLPWALPVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH MWALAAASLVTCAQRLHTVRTSPGATDRGSDAP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036; 10889206 [H]