| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yhgE [H]
Identifier: 41408465
GI number: 41408465
Start: 2660550
End: 2662454
Strand: Reverse
Name: yhgE [H]
Synonym: MAP2367c
Alternate gene names: 41408465
Gene position: 2662454-2660550 (Counterclockwise)
Preceding gene: 41408466
Following gene: 41408462
Centisome position: 55.13
GC content: 67.45
Gene sequence:
>1905_bases ATGCTGGCTGGACTCGCCTTTGGCTCAGAGATCAAACGCTTCCGGCGCAGCCGATTGACGCGCGCGGCCATCGTCGTGCT GATGCTGCTCCCCCTGGTGTACGGGGCGCTGTACCTGTGGGCCTTCTGGGATCCCTTCGGCCACACCAACAAGATGCCGG TGGCGCTGGTCAACTCCGACCGGGGCGCCGTCGTGTCCGGCCAGCAGTTCAACGCCGGTGCGGAGATCGCCAAGAGTCTG ACCGCCGACGGCAGCCTGGACTGGCACGTCGTGGACTTACCGGAGGCACGCAACGGAGTCGACCACGGCAAGTACTACTT CATGGTCGAGCTGCCGCCGGACTTCAGCGCGGCGATCGCGTCGCCGGTGACCGGGCAACCCAAGAAGGCCAACCTGATCG CCGTCTACAACGACGCCAACAACTACATCTCGACGAGCATCGGTCGTACCGCCATCGAGCAGGTACTCAACGCCGTCTCC AGCCGGATCTCGGGACAGGCCGTCAATCAGATGCTGTCGGTGGTGGTTTCGTCCGGATCGGGTATCAAGCAGGCCGCAGA CGGGGCGGCCCGACTCGACGACGGCGCCGGTCAGCTGGCAGCCGGCCTGGACAGCGCGCGGACCGGCTCGGCGACGCTCG CCGCCGGCGCCACGCAACTGTCCGACGGAATCAACCAGGCCACCGACCCGCTGCTCGCGGTGACCAAGGCGGTATCGCAG ATCGGCGGCAGCACAGAGCAATTGCAGCAGGGCGCCACCGCGCTCGCACAGGCCAACGATCAGCTCGGCGCCATCGCCGC GGCGCAGGACGCCGCCGCGAGCTCGCTGACGTCGGTGATCGACCAGCTCTCCGCGCGAGCGGATCCGCTGGCGAACAACC TGCGCGGCATCCAGGATCAACTCCGGGGTCACCAGTTCACCCCCCAGATCCGCCAGCAGCTCACCGATGCGCAGAACGCG GCAATCGCCATGACCTCGGGGTTGCGGACCCCGGGCAGTCCGCTCGCGTCGGCGCTCGATCAGCTCGGCGGCAAGGGCCA GGAGCTGACCAACAAGCTCACCCAGCTGCGCGACGGGGCGCAGCAAGTCGCCACCGGTAACGCCGAATTGGCCGGCGGCA TCGCCAAGCTCGACGACGGCGCCGGCCAACTCAAAGCGGGATCGGCCGAGCTGGCGACGAAACTCGCCGAGGGCGCCAGG CAGGTGCCGAACTGGACCACCCAGCAAAAGGAAGCGGTCGCCGACACCATCGGCGGCCCGGTGCAACTCGAGGCTTCCCA TGAGAACGCCGCGCCCAACTTCGGCACCGGTATGGCCCCGTTCTTCCTCACCCTCGCCCTGTTCTTCGGCGCATTGGTGC TGTGGATGGTGTTGCGGCCCTTGCAATATCGTGCGATCGCCGCGGAGGTGATCGCGATCCGCGTGGTGCTCGCCAGCTAC CTGCCCGCCGCTGCGATCGCGCTGTTCCAGGCCGTCGTTCTCTACTGTGTGGTCCGGTTCGCCCTCGGCATGCACGCCGT CCACCCGGTGGCGATGCTGGGGTTCATGGTGCTGATTTCCGGCGCGTTCGTGGCCGCGACGCAGGCCATCAACGCTCTTG TCGGTCCGGCGGTGGGCCGGGTGCTGATCATGGCCCTGCTCATGCTGCAGCTCGTCAGCGCGGGCGGGATGTATCCCGTG GAAACCACGTCGCGGCCGTTCCAGGTCCTGCACCGCTTCGACCCGATGACGTACGGCGTCAACGGACTCCGGCAGCTCAT CCTCGGCGGCATCGACGCCCGACTGTGGCAGGCGATCATCGTGCTGGCCGCGATAACGGCCGTCGCACTGGCGATCTCGT GTCTATCGGCGCGCAGAGACCGGCTGTGGAACCTCAGCAGGCTGTTCCCCGCGATCAAGATGTAG
Upstream 100 bases:
>100_bases GCGGCGCACCGTCGTCGTCGGGGTGACCAACCCGCTCGGCGCCGACGCGCCCGACCACGAACTCCACGATCACCGCATCC CGACCGGGGAGGACTGAAAG
Downstream 100 bases:
>100_bases GCCGCGCGCTCAGGCGATCCCGAAATCGATGATGCCCCGCACGATTTTGCCGTTGAGCAGGTCGTCGTAGGCGTCGTTGA CTCGTCCAGGCGATAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFB [H]
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MLAGLAFGSEIKRFRRSRLTRAAIVVLMLLPLVYGALYLWAFWDPFGHTNKMPVALVNSDRGAVVSGQQFNAGAEIAKSL TADGSLDWHVVDLPEARNGVDHGKYYFMVELPPDFSAAIASPVTGQPKKANLIAVYNDANNYISTSIGRTAIEQVLNAVS SRISGQAVNQMLSVVVSSGSGIKQAADGAARLDDGAGQLAAGLDSARTGSATLAAGATQLSDGINQATDPLLAVTKAVSQ IGGSTEQLQQGATALAQANDQLGAIAAAQDAAASSLTSVIDQLSARADPLANNLRGIQDQLRGHQFTPQIRQQLTDAQNA AIAMTSGLRTPGSPLASALDQLGGKGQELTNKLTQLRDGAQQVATGNAELAGGIAKLDDGAGQLKAGSAELATKLAEGAR QVPNWTTQQKEAVADTIGGPVQLEASHENAAPNFGTGMAPFFLTLALFFGALVLWMVLRPLQYRAIAAEVIAIRVVLASY LPAAAIALFQAVVLYCVVRFALGMHAVHPVAMLGFMVLISGAFVAATQAINALVGPAVGRVLIMALLMLQLVSAGGMYPV ETTSRPFQVLHRFDPMTYGVNGLRQLILGGIDARLWQAIIVLAAITAVALAISCLSARRDRLWNLSRLFPAIKM
Sequences:
>Translated_634_residues MLAGLAFGSEIKRFRRSRLTRAAIVVLMLLPLVYGALYLWAFWDPFGHTNKMPVALVNSDRGAVVSGQQFNAGAEIAKSL TADGSLDWHVVDLPEARNGVDHGKYYFMVELPPDFSAAIASPVTGQPKKANLIAVYNDANNYISTSIGRTAIEQVLNAVS SRISGQAVNQMLSVVVSSGSGIKQAADGAARLDDGAGQLAAGLDSARTGSATLAAGATQLSDGINQATDPLLAVTKAVSQ IGGSTEQLQQGATALAQANDQLGAIAAAQDAAASSLTSVIDQLSARADPLANNLRGIQDQLRGHQFTPQIRQQLTDAQNA AIAMTSGLRTPGSPLASALDQLGGKGQELTNKLTQLRDGAQQVATGNAELAGGIAKLDDGAGQLKAGSAELATKLAEGAR QVPNWTTQQKEAVADTIGGPVQLEASHENAAPNFGTGMAPFFLTLALFFGALVLWMVLRPLQYRAIAAEVIAIRVVLASY LPAAAIALFQAVVLYCVVRFALGMHAVHPVAMLGFMVLISGAFVAATQAINALVGPAVGRVLIMALLMLQLVSAGGMYPV ETTSRPFQVLHRFDPMTYGVNGLRQLILGGIDARLWQAIIVLAAITAVALAISCLSARRDRLWNLSRLFPAIKM >Mature_634_residues MLAGLAFGSEIKRFRRSRLTRAAIVVLMLLPLVYGALYLWAFWDPFGHTNKMPVALVNSDRGAVVSGQQFNAGAEIAKSL TADGSLDWHVVDLPEARNGVDHGKYYFMVELPPDFSAAIASPVTGQPKKANLIAVYNDANNYISTSIGRTAIEQVLNAVS SRISGQAVNQMLSVVVSSGSGIKQAADGAARLDDGAGQLAAGLDSARTGSATLAAGATQLSDGINQATDPLLAVTKAVSQ IGGSTEQLQQGATALAQANDQLGAIAAAQDAAASSLTSVIDQLSARADPLANNLRGIQDQLRGHQFTPQIRQQLTDAQNA AIAMTSGLRTPGSPLASALDQLGGKGQELTNKLTQLRDGAQQVATGNAELAGGIAKLDDGAGQLKAGSAELATKLAEGAR QVPNWTTQQKEAVADTIGGPVQLEASHENAAPNFGTGMAPFFLTLALFFGALVLWMVLRPLQYRAIAAEVIAIRVVLASY LPAAAIALFQAVVLYCVVRFALGMHAVHPVAMLGFMVLISGAFVAATQAINALVGPAVGRVLIMALLMLQLVSAGGMYPV ETTSRPFQVLHRFDPMTYGVNGLRQLILGGIDARLWQAIIVLAAITAVALAISCLSARRDRLWNLSRLFPAIKM
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To L.lactis phage infection protein (PIP) [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR022703 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane; PF12051 DUF3533 [H]
EC number: NA
Molecular weight: Translated: 66357; Mature: 66357
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGLAFGSEIKRFRRSRLTRAAIVVLMLLPLVYGALYLWAFWDPFGHTNKMPVALVNSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC RGAVVSGQQFNAGAEIAKSLTADGSLDWHVVDLPEARNGVDHGKYYFMVELPPDFSAAIA CCCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCHHCCCCCCCCEEEEEECCCCHHHHHC SPVTGQPKKANLIAVYNDANNYISTSIGRTAIEQVLNAVSSRISGQAVNQMLSVVVSSGS CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIKQAADGAARLDDGAGQLAAGLDSARTGSATLAAGATQLSDGINQATDPLLAVTKAVSQ CHHHHCCCHHHCCCCCHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IGGSTEQLQQGATALAQANDQLGAIAAAQDAAASSLTSVIDQLSARADPLANNLRGIQDQ HCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LRGHQFTPQIRQQLTDAQNAAIAMTSGLRTPGSPLASALDQLGGKGQELTNKLTQLRDGA HCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH QQVATGNAELAGGIAKLDDGAGQLKAGSAELATKLAEGARQVPNWTTQQKEAVADTIGGP HHHHCCCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC VQLEASHENAAPNFGTGMAPFFLTLALFFGALVLWMVLRPLQYRAIAAEVIAIRVVLASY EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAAAIALFQAVVLYCVVRFALGMHAVHPVAMLGFMVLISGAFVAATQAINALVGPAVGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIMALLMLQLVSAGGMYPVETTSRPFQVLHRFDPMTYGVNGLRQLILGGIDARLWQAII HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHCHHHHHHHHHCCHHHHHHHHHH VLAAITAVALAISCLSARRDRLWNLSRLFPAIKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLAGLAFGSEIKRFRRSRLTRAAIVVLMLLPLVYGALYLWAFWDPFGHTNKMPVALVNSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC RGAVVSGQQFNAGAEIAKSLTADGSLDWHVVDLPEARNGVDHGKYYFMVELPPDFSAAIA CCCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCHHCCCCCCCCEEEEEECCCCHHHHHC SPVTGQPKKANLIAVYNDANNYISTSIGRTAIEQVLNAVSSRISGQAVNQMLSVVVSSGS CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIKQAADGAARLDDGAGQLAAGLDSARTGSATLAAGATQLSDGINQATDPLLAVTKAVSQ CHHHHCCCHHHCCCCCHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHH IGGSTEQLQQGATALAQANDQLGAIAAAQDAAASSLTSVIDQLSARADPLANNLRGIQDQ HCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LRGHQFTPQIRQQLTDAQNAAIAMTSGLRTPGSPLASALDQLGGKGQELTNKLTQLRDGA HCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH QQVATGNAELAGGIAKLDDGAGQLKAGSAELATKLAEGARQVPNWTTQQKEAVADTIGGP HHHHCCCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC VQLEASHENAAPNFGTGMAPFFLTLALFFGALVLWMVLRPLQYRAIAAEVIAIRVVLASY EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAAAIALFQAVVLYCVVRFALGMHAVHPVAMLGFMVLISGAFVAATQAINALVGPAVGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIMALLMLQLVSAGGMYPVETTSRPFQVLHRFDPMTYGVNGLRQLILGGIDARLWQAII HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHCHHHHHHHHHCCHHHHHHHHHH VLAAITAVALAISCLSARRDRLWNLSRLFPAIKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 1459957 [H]