| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408466
Identifier: 41408466
GI number: 41408466
Start: 2662458
End: 2663135
Strand: Reverse
Name: 41408466
Synonym: MAP2368c
Alternate gene names: NA
Gene position: 2663135-2662458 (Counterclockwise)
Preceding gene: 41408467
Following gene: 41408465
Centisome position: 55.14
GC content: 69.32
Gene sequence:
>678_bases ATGGATGCCAACAACGAACCGGACGACGTCGCACCGGTGATCACCGCCGCCGGATTGGGGGTCGACGGCGAGCACGGGCC GCTGTTCTCGGGGGTCGACCTGGCCCTGACGCCGGGCTTTCACGCGATTCAGATGCCCGGCGGACCGGGGCAGACCACAC TGCTGCTGACGCTCGCGGGACGGTTCAAGCCCAGCCACGGCACGCTCACCGTCCTCGGCGCAACAACCCCGCGCGCGATC CGCCGGCACTGCTCCATCGCGGCGTTCGAAGGCATCGACGATCTCGAGGATTCGGTGACCGTGGGGACCGTGCTCGCCGA GCAACGCCGGTGGCTGGCGCCCTGGTACTCGTCGGTGCCGCTGCAATCGGGCCCGGCCGAGCTCACCGAGGTCTTCGGCG ACACGGCCCCGCCATCCGACAACACCTACGTCGTCGAACTGTCGGACCTCGAACTGTTCCTGCTGCGGATCACGCTGGCG TTGCTGTCGAACCGTCCGATTCTGGTGGTCGGCGACCTCGAACAGGTTCGTGACAACTCCCGACGAGCGATCGCGGCCGA GCGGCTCGGCGCGATCGCGAGGCGGCGCACCGTCGTCGTCGGGGTGACCAACCCGCTCGGCGCCGACGCGCCCGACCACG AACTCCACGATCACCGCATCCCGACCGGGGAGGACTGA
Upstream 100 bases:
>100_bases TGCTGCGCCCGGGAACCATCAACCCCGACCTGCTCGCCCAGCTGATCACCGCGCTGCTGGAATCGATACCGGTCTGACGG TGATGAGGGAAAGCCACACC
Downstream 100 bases:
>100_bases AAGATGCTGGCTGGACTCGCCTTTGGCTCAGAGATCAAACGCTTCCGGCGCAGCCGATTGACGCGCGCGGCCATCGTCGT GCTGATGCTGCTCCCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MDANNEPDDVAPVITAAGLGVDGEHGPLFSGVDLALTPGFHAIQMPGGPGQTTLLLTLAGRFKPSHGTLTVLGATTPRAI RRHCSIAAFEGIDDLEDSVTVGTVLAEQRRWLAPWYSSVPLQSGPAELTEVFGDTAPPSDNTYVVELSDLELFLLRITLA LLSNRPILVVGDLEQVRDNSRRAIAAERLGAIARRRTVVVGVTNPLGADAPDHELHDHRIPTGED
Sequences:
>Translated_225_residues MDANNEPDDVAPVITAAGLGVDGEHGPLFSGVDLALTPGFHAIQMPGGPGQTTLLLTLAGRFKPSHGTLTVLGATTPRAI RRHCSIAAFEGIDDLEDSVTVGTVLAEQRRWLAPWYSSVPLQSGPAELTEVFGDTAPPSDNTYVVELSDLELFLLRITLA LLSNRPILVVGDLEQVRDNSRRAIAAERLGAIARRRTVVVGVTNPLGADAPDHELHDHRIPTGED >Mature_225_residues MDANNEPDDVAPVITAAGLGVDGEHGPLFSGVDLALTPGFHAIQMPGGPGQTTLLLTLAGRFKPSHGTLTVLGATTPRAI RRHCSIAAFEGIDDLEDSVTVGTVLAEQRRWLAPWYSSVPLQSGPAELTEVFGDTAPPSDNTYVVELSDLELFLLRITLA LLSNRPILVVGDLEQVRDNSRRAIAAERLGAIARRRTVVVGVTNPLGADAPDHELHDHRIPTGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23958; Mature: 23958
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDANNEPDDVAPVITAAGLGVDGEHGPLFSGVDLALTPGFHAIQMPGGPGQTTLLLTLAG CCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCEEECCCCEEEECCCCCCCEEEEEEEEC RFKPSHGTLTVLGATTPRAIRRHCSIAAFEGIDDLEDSVTVGTVLAEQRRWLAPWYSSVP CCCCCCCCEEEEECCCHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC LQSGPAELTEVFGDTAPPSDNTYVVELSDLELFLLRITLALLSNRPILVVGDLEQVRDNS CCCCHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCC RRAIAAERLGAIARRRTVVVGVTNPLGADAPDHELHDHRIPTGED HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDANNEPDDVAPVITAAGLGVDGEHGPLFSGVDLALTPGFHAIQMPGGPGQTTLLLTLAG CCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCEEECCCCEEEECCCCCCCEEEEEEEEC RFKPSHGTLTVLGATTPRAIRRHCSIAAFEGIDDLEDSVTVGTVLAEQRRWLAPWYSSVP CCCCCCCCEEEEECCCHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC LQSGPAELTEVFGDTAPPSDNTYVVELSDLELFLLRITLALLSNRPILVVGDLEQVRDNS CCCCHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCC RRAIAAERLGAIARRRTVVVGVTNPLGADAPDHELHDHRIPTGED HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA