| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408433
Identifier: 41408433
GI number: 41408433
Start: 2625313
End: 2626221
Strand: Reverse
Name: 41408433
Synonym: MAP2335c
Alternate gene names: NA
Gene position: 2626221-2625313 (Counterclockwise)
Preceding gene: 41408435
Following gene: 41408432
Centisome position: 54.38
GC content: 70.08
Gene sequence:
>909_bases GTGGCTGAGCAGTTGCTGATCGGCGACGTCACGGCCCTGACCGGAATCGCCTCGGGCCGTATTCGCCACTACGAGAAGAT CGGGCTGCTGCACGCCGACCACCTGTCCAACGGCTACCGCGTCTTCGACGTGGAACAGGTGCTGGACCTGTTGCGCATCG ACCTGATGCGCAGTCTCGGCGTCGGCATCAACGACATTCAGCGATTGCTGCACGGCGGGCACAGCACGCTGGCGGATCTG CTCGACGAGCACCGCGCACTGCTGATCCAGCAGCGCGACCGGTTGGACCAACTGATCCGCGCCCTGGACGAATCCTGCGC CCAGTCAAGAGCGGCCGCCGACGGCACCGACGTCAGCGAGCACCTGCTGCGCCAGCTGGCGACCACGCATCGCGACAGCA TCGGGGTGATCGGGCGGCTCAGCGCCCCACTGCCGGCGCCGGTCGCCGCGATGTATGCCGACCTGTTCGACGAGTGGGAC CTGCCGGTCCCCGCCCTGTTCGGGCAGATGAGGCTTCCGAGCGCGGCCAGCACCCTGCTGGCCCGACTGGCCGAGACCCC GGGGCGCCAGGTGCTGTTCGACCGGCTGCGCCGGCTGGCCGCCGACGTCATCGCGCTCGGCGAAAGCGTATCGGCGGCAA CCGAACTCGCGCACAATTGGATCGAGCAGCAGCTGGCCGACCCGCTGCCCGACGACGTGGTCACGGTGCTGCGGGGCGTG CAACCGCTGTTGGGGCAGGACCCGGTGATCGTACAGGGGTTTCGGGCCTGGGCGGGCTCGATCAGCCCGGCAGCCGCCCG GTTCATCGAGGAGATCGCGCGGCAGACCGCGCGCCGGGGCCTGGCGGCGGTGAGCGTCATCGTGCTGCCCGCGGCGGACC GGGCCCAAACCGTCGATGCGACGCCGTGA
Upstream 100 bases:
>100_bases CCTGTCCCGCGCCAGCTTCAAGGCACGCCGGGTCAGGTCGATGAGCTGATCGTGTTGCATCCGCTCAGTACAGACCTTGC GACAGTTGTAAGGTCAAGGA
Downstream 100 bases:
>100_bases TACAAATGTGACTCGTGTGATCAGCGGGGCGCATGGGGTTTATGTCGTACCCTGTGGCCTGTGTCCTCCGTTTCGCGGCG CGATCTGCTGAAATTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLGVGINDIQRLLHGGHSTLADL LDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSEHLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWD LPVPALFGQMRLPSAASTLLARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDATP
Sequences:
>Translated_302_residues MAEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLGVGINDIQRLLHGGHSTLADL LDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSEHLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWD LPVPALFGQMRLPSAASTLLARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDATP >Mature_301_residues AEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLGVGINDIQRLLHGGHSTLADLL DEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSEHLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWDL PVPALFGQMRLPSAASTLLARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGVQ PLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDATP
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32737; Mature: 32606
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHC VGINDIQRLLHGGHSTLADLLDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSE CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH HLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWDLPVPALFGQMRLPSAASTLL HHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH ARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDA HHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC TP CC >Mature Secondary Structure AEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHC VGINDIQRLLHGGHSTLADLLDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSE CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH HLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWDLPVPALFGQMRLPSAASTLL HHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH ARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDA HHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC TP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA