| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408432
Identifier: 41408432
GI number: 41408432
Start: 2624530
End: 2625252
Strand: Reverse
Name: 41408432
Synonym: MAP2334c
Alternate gene names: NA
Gene position: 2625252-2624530 (Counterclockwise)
Preceding gene: 41408433
Following gene: 41408430
Centisome position: 54.36
GC content: 69.16
Gene sequence:
>723_bases GTGTCCTCCGTTTCGCGGCGCGATCTGCTGAAATTCGCGGCCGCGGCGCCGGCCCTGCTGGGCCTGGGCGTCGCGGGTTC GACGGTGCACGCCGCGCCGGCGTCGGCATCGCTGGGCACCCTGCTCGACTACGCGGCCGGTGTCATCCCGGGCAGCCAGT TGCGCGCGGCCGGCGCCCTGGGGGCGATTCGGTACGTGTCGGACCGCCGGCCCGGCGGGAACTGGATGCTGGGCAAGCCG ATCCAGGTGGCCGAGGCGCGCGATCTCAACGCCAACGGGCTCAAGATCGTGTCCTGCTACCAGTACGGCAAGGGCAACAC CGCGGACTGGCTGGGCGGCGCCAGCGCCGGCCTGCAGCACGCGCAGCGCGGCATGCAGCTGCACGCCGCGGCGGGCGGGC CGGCCACCGCACCCATTTACGCCTCGATCGACGACGACCCGTCCTACGAGCAGTACAAGAGCCAGATCGCGCCGTATCTG CGGTCGTGGGAGTCGGTGATCGGCCATCAGCGCACAGGCGTGTACGCCAATTCCAAAACCATCGATTGGGCGTTGCACGA CGGGCTGGGCTCCTATTTCTGGCAGCACAACTGGGGATCGCCCAAGGGGTTCACCCATCCGGCCGCCCATCTGCACCAGG TCGAGATCGACAAACGCAGCGTGGGCGGGGTCGGGGTGGACATCAACGAGATCCTCAAGCCCCAATTCGGGCAGTGGGTC TAG
Upstream 100 bases:
>100_bases CGCGGCGGACCGGGCCCAAACCGTCGATGCGACGCCGTGATACAAATGTGACTCGTGTGATCAGCGGGGCGCATGGGGTT TATGTCGTACCCTGTGGCCT
Downstream 100 bases:
>100_bases CCGCCGCCAGGCCCTCGCGAGCCGTCACCGCGGCCGCCGGGCCGGCCGGAAGGCCGACTCTTAGAAATTCCAGCAAACAC TCGTTCGCTCATTTTCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Twin-Arginine Translocation Pathway
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSSVSRRDLLKFAAAAPALLGLGVAGSTVHAAPASASLGTLLDYAAGVIPGSQLRAAGALGAIRYVSDRRPGGNWMLGKP IQVAEARDLNANGLKIVSCYQYGKGNTADWLGGASAGLQHAQRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYL RSWESVIGHQRTGVYANSKTIDWALHDGLGSYFWQHNWGSPKGFTHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQWV
Sequences:
>Translated_240_residues MSSVSRRDLLKFAAAAPALLGLGVAGSTVHAAPASASLGTLLDYAAGVIPGSQLRAAGALGAIRYVSDRRPGGNWMLGKP IQVAEARDLNANGLKIVSCYQYGKGNTADWLGGASAGLQHAQRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYL RSWESVIGHQRTGVYANSKTIDWALHDGLGSYFWQHNWGSPKGFTHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQWV >Mature_239_residues SSVSRRDLLKFAAAAPALLGLGVAGSTVHAAPASASLGTLLDYAAGVIPGSQLRAAGALGAIRYVSDRRPGGNWMLGKPI QVAEARDLNANGLKIVSCYQYGKGNTADWLGGASAGLQHAQRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYLR SWESVIGHQRTGVYANSKTIDWALHDGLGSYFWQHNWGSPKGFTHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25414; Mature: 25283
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVSRRDLLKFAAAAPALLGLGVAGSTVHAAPASASLGTLLDYAAGVIPGSQLRAAGAL CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHH GAIRYVSDRRPGGNWMLGKPIQVAEARDLNANGLKIVSCYQYGKGNTADWLGGASAGLQH HHHHHHHCCCCCCCEECCCCEEECCCCCCCCCCEEEEEEEECCCCCCCHHCCCHHHHHHH AQRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYLRSWESVIGHQRTGVYANSKT HHCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCE IDWALHDGLGSYFWQHNWGSPKGFTHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQWV EEEHHHCCHHHHHEECCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure SSVSRRDLLKFAAAAPALLGLGVAGSTVHAAPASASLGTLLDYAAGVIPGSQLRAAGAL CCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHH GAIRYVSDRRPGGNWMLGKPIQVAEARDLNANGLKIVSCYQYGKGNTADWLGGASAGLQH HHHHHHHCCCCCCCEECCCCEEECCCCCCCCCCEEEEEEEECCCCCCCHHCCCHHHHHHH AQRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYLRSWESVIGHQRTGVYANSKT HHCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCE IDWALHDGLGSYFWQHNWGSPKGFTHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQWV EEEHHHCCHHHHHEECCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA