| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408435
Identifier: 41408435
GI number: 41408435
Start: 2627396
End: 2628763
Strand: Reverse
Name: 41408435
Synonym: MAP2337c
Alternate gene names: NA
Gene position: 2628763-2627396 (Counterclockwise)
Preceding gene: 41408437
Following gene: 41408433
Centisome position: 54.43
GC content: 67.25
Gene sequence:
>1368_bases GTGTCGAGGCGAGAGATGAACAGCGACTGGCGCAGTTATCCATTCCAGCTGGTGCCCGGAGACGGCCAGCTCGAATTCCC CGCTGCCGAAGGCGAACACCGTGACCAGGAGTCGGACACCTGGTTCCTCGCGGGCCAGCTGGAGGCCGCCGGGGCCGACC GGTCGTTCGCCTTCCTGACCATCTTCAACAAGAACCGGCCCGGCGGCACGGTGGTCGCCGATTTCTACACGATGGCGCTG TTCGATCTCGATACCGGCGACTACGGCACCTATACGGATTACGACATGCCGCCGGCCAATCTCGAGCCGGGGGCGCCGCG CAAGATGGGGCTGGCCGCCGGCTATCTCGACATCAGCTACGCCAGTGGCGCCGGCACCGCATCATGGACCAGCTGCCGCA ACGGCGACGGCGGTTTACTGCCCTACACCTACCGGGTGAGCCTGGTCGGCGAGGACCATTGCGGCCGGCGGATGCGCCTG GACCTGGCCGTAACGCCAACGCGCGCACCGACTCCGGTGGGCGCGTCGGCCTACAACGGAAAGATCGTCTGCTTCGGCCA ACGCGACACCTACTCCTACTTCCAGACCGGCATGGCGATGACGGGCACCCTCCGCTGGGGCGAGCAGGTCCACCAGGTGT CGGGCAGCAGCGGTCATGTCGATCGGCAGTGGTTCCCGAAATACGCCGGCGGTGGCGGCTCCGGCGGGGACCCACGGGCC AGGTCGCACGAGTGGCGCACCATCAACTTCGACAACGGCGTCGACCTGAGCATCTGGCGGCAGTTCGACCGCACGAATAA CAATGTCCTGCAACCGTTTACCGGGATCACGGTCAGCTATCCCGACTCCGCCATGGCGCCGGAGTGCGCCGAGGACGTCG AGGTCACCGTCAGCAGCTACGTCCGCTGGCCGGAGAGCATGCGGCCCTTGGTGCGTCCCCTTGCCCCTGCCCGGTACCTG CCCGATCGTCACCGGATCGCCTGTCCCACATTGGGACTCGACATCACCGGCGAGCCGGTGGTGGCGGCGCCGGCGCACGG TCTGCCGATCGAATACATGGAAGGCCCCTACCGTTACCGCGGGACCCTGCAGGGACAACCGGTGACCGCGTTTGCCTTCA ACGAACGGTCCCTGGCGCTCTACCGCGATTGGGAATTGGTCGAGGTGCTCGCCACCACCGTCACGCATACCGAACCGTCC GATCCCGACCTGCGGGCGACGGTGGATCGATTGGCCCCGTTGGTGGCCGCCGGCCGTCGGCGCGAGGCGGTCGAACTGCT GGCCGCCGTGCGCCCCGCCCAGACCGGCGCGCTGGCAACGTTATTGGACGATCTGGTGACGGTGCTGTCCACCGAGTCAG CCGGTTGA
Upstream 100 bases:
>100_bases GCGATGGGCGCTGGACCGGATCCGCACCGTAATTTGCTATTGACGCTAACATAGCGAAAAAAGGACAAGTCAGGAAGCCG CGGATGGATCATCGGCGACG
Downstream 100 bases:
>100_bases GGCCGCCAGCGCCTTGGCCCAGGTGATGTGGCGGTGCTGCAATCCCGGCTCGTTGCGGCCGAACACCAGGTGGTCGCGCG CGCCGGACTCGAGGTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSRREMNSDWRSYPFQLVPGDGQLEFPAAEGEHRDQESDTWFLAGQLEAAGADRSFAFLTIFNKNRPGGTVVADFYTMAL FDLDTGDYGTYTDYDMPPANLEPGAPRKMGLAAGYLDISYASGAGTASWTSCRNGDGGLLPYTYRVSLVGEDHCGRRMRL DLAVTPTRAPTPVGASAYNGKIVCFGQRDTYSYFQTGMAMTGTLRWGEQVHQVSGSSGHVDRQWFPKYAGGGGSGGDPRA RSHEWRTINFDNGVDLSIWRQFDRTNNNVLQPFTGITVSYPDSAMAPECAEDVEVTVSSYVRWPESMRPLVRPLAPARYL PDRHRIACPTLGLDITGEPVVAAPAHGLPIEYMEGPYRYRGTLQGQPVTAFAFNERSLALYRDWELVEVLATTVTHTEPS DPDLRATVDRLAPLVAAGRRREAVELLAAVRPAQTGALATLLDDLVTVLSTESAG
Sequences:
>Translated_455_residues MSRREMNSDWRSYPFQLVPGDGQLEFPAAEGEHRDQESDTWFLAGQLEAAGADRSFAFLTIFNKNRPGGTVVADFYTMAL FDLDTGDYGTYTDYDMPPANLEPGAPRKMGLAAGYLDISYASGAGTASWTSCRNGDGGLLPYTYRVSLVGEDHCGRRMRL DLAVTPTRAPTPVGASAYNGKIVCFGQRDTYSYFQTGMAMTGTLRWGEQVHQVSGSSGHVDRQWFPKYAGGGGSGGDPRA RSHEWRTINFDNGVDLSIWRQFDRTNNNVLQPFTGITVSYPDSAMAPECAEDVEVTVSSYVRWPESMRPLVRPLAPARYL PDRHRIACPTLGLDITGEPVVAAPAHGLPIEYMEGPYRYRGTLQGQPVTAFAFNERSLALYRDWELVEVLATTVTHTEPS DPDLRATVDRLAPLVAAGRRREAVELLAAVRPAQTGALATLLDDLVTVLSTESAG >Mature_454_residues SRREMNSDWRSYPFQLVPGDGQLEFPAAEGEHRDQESDTWFLAGQLEAAGADRSFAFLTIFNKNRPGGTVVADFYTMALF DLDTGDYGTYTDYDMPPANLEPGAPRKMGLAAGYLDISYASGAGTASWTSCRNGDGGLLPYTYRVSLVGEDHCGRRMRLD LAVTPTRAPTPVGASAYNGKIVCFGQRDTYSYFQTGMAMTGTLRWGEQVHQVSGSSGHVDRQWFPKYAGGGGSGGDPRAR SHEWRTINFDNGVDLSIWRQFDRTNNNVLQPFTGITVSYPDSAMAPECAEDVEVTVSSYVRWPESMRPLVRPLAPARYLP DRHRIACPTLGLDITGEPVVAAPAHGLPIEYMEGPYRYRGTLQGQPVTAFAFNERSLALYRDWELVEVLATTVTHTEPSD PDLRATVDRLAPLVAAGRRREAVELLAAVRPAQTGALATLLDDLVTVLSTESAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49843; Mature: 49712
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRREMNSDWRSYPFQLVPGDGQLEFPAAEGEHRDQESDTWFLAGQLEAAGADRSFAFLT CCCCCCCCHHHHCCCEEECCCCCEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEE IFNKNRPGGTVVADFYTMALFDLDTGDYGTYTDYDMPPANLEPGAPRKMGLAAGYLDISY EEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCEEECEEEEEE ASGAGTASWTSCRNGDGGLLPYTYRVSLVGEDHCGRRMRLDLAVTPTRAPTPVGASAYNG CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCC KIVCFGQRDTYSYFQTGMAMTGTLRWGEQVHQVSGSSGHVDRQWFPKYAGGGGSGGDPRA EEEEEECCCCHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC RSHEWRTINFDNGVDLSIWRQFDRTNNNVLQPFTGITVSYPDSAMAPECAEDVEVTVSSY CCCCCEEEECCCCCCHHHHHHHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHHHHHHH VRWPESMRPLVRPLAPARYLPDRHRIACPTLGLDITGEPVVAAPAHGLPIEYMEGPYRYR HCCCHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCCCCEEECCCCCCCHHHCCCCEEEE GTLQGQPVTAFAFNERSLALYRDWELVEVLATTVTHTEPSDPDLRATVDRLAPLVAAGRR EEECCCCEEEEEECCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH REAVELLAAVRPAQTGALATLLDDLVTVLSTESAG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRREMNSDWRSYPFQLVPGDGQLEFPAAEGEHRDQESDTWFLAGQLEAAGADRSFAFLT CCCCCCCHHHHCCCEEECCCCCEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEE IFNKNRPGGTVVADFYTMALFDLDTGDYGTYTDYDMPPANLEPGAPRKMGLAAGYLDISY EEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCEEECEEEEEE ASGAGTASWTSCRNGDGGLLPYTYRVSLVGEDHCGRRMRLDLAVTPTRAPTPVGASAYNG CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCC KIVCFGQRDTYSYFQTGMAMTGTLRWGEQVHQVSGSSGHVDRQWFPKYAGGGGSGGDPRA EEEEEECCCCHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC RSHEWRTINFDNGVDLSIWRQFDRTNNNVLQPFTGITVSYPDSAMAPECAEDVEVTVSSY CCCCCEEEECCCCCCHHHHHHHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHHHHHHH VRWPESMRPLVRPLAPARYLPDRHRIACPTLGLDITGEPVVAAPAHGLPIEYMEGPYRYR HCCCHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCCCCEEECCCCCCCHHHCCCCEEEE GTLQGQPVTAFAFNERSLALYRDWELVEVLATTVTHTEPSDPDLRATVDRLAPLVAAGRR EEECCCCEEEEEECCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH REAVELLAAVRPAQTGALATLLDDLVTVLSTESAG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA