| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408421
Identifier: 41408421
GI number: 41408421
Start: 2604811
End: 2605704
Strand: Reverse
Name: 41408421
Synonym: MAP2323c
Alternate gene names: NA
Gene position: 2605704-2604811 (Counterclockwise)
Preceding gene: 41408422
Following gene: 41408420
Centisome position: 53.95
GC content: 73.27
Gene sequence:
>894_bases GTGCCCCGAACCGAGATCATCGCCGCATTACTCGCGTTGAGCTCCGCGCTGTGCGTCGCGACCGGGGACGTGTTGCAGCA GCGGGCGGCGCATTGCATCACCGACCGCGAGTTGGGCCCGGTCGAATTGTTCGCCGGACTGCTGCGCAGCCAGCGGTGGT GGTGGGGCGCCGTGCTGTTGCTGGCGAGCATCGGGTTGCAGGCCGCCGCCCTGGGCGGCGGCTCGGTGTTGCTGGTGCAG GCGCTGCTGATGTTCTCGGTGCTCTTCGCCCTGCCCATCAACGCCCGGCTGTCGCACCGCGCCGTGACCGCGGGCGAATG GGTCTGGGCGGCCCTGCTCACCGCGGCGGTGACCGTGGTCGTCGTCGTGGGCAATCCGCAGACCGGTCACGCCGGCGCGC CGCTGCGCACCTGGGCGGTGGTGGCCCTGGTGCTGGGGCCGCTGCTGGCCGGCTGCGTGGTGGCCGGCCGGGCCCGGGGC GGAGCCGTGGCCGCGGTGCTGTTCGCCTTCGTGTCGGGGTCGCTGTGGGGCGTGTTCGCGGTGCTCGCCAAGGAGGTGAT GGCGCGGCTGGGGCAGGGAGTCGGGGTGGTGACCCGGACCCCGGAGCTGTATGCCTGCATCCTGGTTGCGCTGGGGGGCG TGGTGTGGAGTCAGGCGGCGTTTCGGGCCGGGCCGTTGACCGCGTCGATGCCAACCCTGCAGGTGTCGCAGCCGGTGGTG GCGTCGGTGCTGGGCGTGGTCGTGCTGGGCGAGACGCTGGACACCGGCCGGGCCGGGACGGTCGCGCTGCTGGTGGCCGT GGTGGTGATGACGGCGGCCATCATCAAGCTCGCCCGCGTCGAAGCCGTCGCGACCCGCGACCGGGCCGAGGCGCAACTGC ACCAGCCCGCCTAG
Upstream 100 bases:
>100_bases CGCGACCCGCGATCCGCAGGTGGCCCAGCCGGGCCACATCGGGTCGCGGTTGACACGCCAATCCGCTTGTAGAGCAATAA CTTTCGGAGGGAGAATCCTC
Downstream 100 bases:
>100_bases TTTGCTGACTCGCCGGATTGCGAGTCGATTTCGGTGCCGACACCGAACGGCCGCCGCCGGCGCGGATGCGCACGGGACGA CGCCCGAAACCCATTAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPRTEIIAALLALSSALCVATGDVLQQRAAHCITDRELGPVELFAGLLRSQRWWWGAVLLLASIGLQAAALGGGSVLLVQ ALLMFSVLFALPINARLSHRAVTAGEWVWAALLTAAVTVVVVVGNPQTGHAGAPLRTWAVVALVLGPLLAGCVVAGRARG GAVAAVLFAFVSGSLWGVFAVLAKEVMARLGQGVGVVTRTPELYACILVALGGVVWSQAAFRAGPLTASMPTLQVSQPVV ASVLGVVVLGETLDTGRAGTVALLVAVVVMTAAIIKLARVEAVATRDRAEAQLHQPA
Sequences:
>Translated_297_residues MPRTEIIAALLALSSALCVATGDVLQQRAAHCITDRELGPVELFAGLLRSQRWWWGAVLLLASIGLQAAALGGGSVLLVQ ALLMFSVLFALPINARLSHRAVTAGEWVWAALLTAAVTVVVVVGNPQTGHAGAPLRTWAVVALVLGPLLAGCVVAGRARG GAVAAVLFAFVSGSLWGVFAVLAKEVMARLGQGVGVVTRTPELYACILVALGGVVWSQAAFRAGPLTASMPTLQVSQPVV ASVLGVVVLGETLDTGRAGTVALLVAVVVMTAAIIKLARVEAVATRDRAEAQLHQPA >Mature_296_residues PRTEIIAALLALSSALCVATGDVLQQRAAHCITDRELGPVELFAGLLRSQRWWWGAVLLLASIGLQAAALGGGSVLLVQA LLMFSVLFALPINARLSHRAVTAGEWVWAALLTAAVTVVVVVGNPQTGHAGAPLRTWAVVALVLGPLLAGCVVAGRARGG AVAAVLFAFVSGSLWGVFAVLAKEVMARLGQGVGVVTRTPELYACILVALGGVVWSQAAFRAGPLTASMPTLQVSQPVVA SVLGVVVLGETLDTGRAGTVALLVAVVVMTAAIIKLARVEAVATRDRAEAQLHQPA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008521 [H]
Pfam domain/function: PF05653 DUF803 [H]
EC number: NA
Molecular weight: Translated: 30475; Mature: 30343
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTEIIAALLALSSALCVATGDVLQQRAAHCITDRELGPVELFAGLLRSQRWWWGAVLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH LASIGLQAAALGGGSVLLVQALLMFSVLFALPINARLSHRAVTAGEWVWAALLTAAVTVV HHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHEE VVVGNPQTGHAGAPLRTWAVVALVLGPLLAGCVVAGRARGGAVAAVLFAFVSGSLWGVFA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHH VLAKEVMARLGQGVGVVTRTPELYACILVALGGVVWSQAAFRAGPLTASMPTLQVSQPVV HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHH ASVLGVVVLGETLDTGRAGTVALLVAVVVMTAAIIKLARVEAVATRDRAEAQLHQPA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PRTEIIAALLALSSALCVATGDVLQQRAAHCITDRELGPVELFAGLLRSQRWWWGAVLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH LASIGLQAAALGGGSVLLVQALLMFSVLFALPINARLSHRAVTAGEWVWAALLTAAVTVV HHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHEE VVVGNPQTGHAGAPLRTWAVVALVLGPLLAGCVVAGRARGGAVAAVLFAFVSGSLWGVFA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHH VLAKEVMARLGQGVGVVTRTPELYACILVALGGVVWSQAAFRAGPLTASMPTLQVSQPVV HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHH ASVLGVVVLGETLDTGRAGTVALLVAVVVMTAAIIKLARVEAVATRDRAEAQLHQPA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8117072; 12948626 [H]