| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mmpL3 [H]
Identifier: 41408422
GI number: 41408422
Start: 2605752
End: 2608106
Strand: Reverse
Name: mmpL3 [H]
Synonym: MAP2324c
Alternate gene names: 41408422
Gene position: 2608106-2605752 (Counterclockwise)
Preceding gene: 41408426
Following gene: 41408421
Centisome position: 54.0
GC content: 69.64
Gene sequence:
>2355_bases GTGATGGCCATGCTGCGAGTAATCACCCGGCTGGCCATCGCCGCGCCGCGCCGCATCATCGGGATCGCGGTCCTGGTCAT GGTGGGCGCGGCGATCTTCGGCCTGCCGGTGGTCAACAGCCTGTCCGGCGGCGGCTTCCAGGATCCGACGTCGGAGTCCG CCCGGGCCACCGAGATCCTGCGGGACCGGTTCAACCAGACCGATCAGCAAATGCTGATCGTGGTGAGCGCCCCCGACGGC GCCCGCAGCCCCCAGGCGCACCGGGTCGGCACCGACATCGTCGACAAACTGAAGAATTCGCCGTGGATGATGAGTGTGTC GTCGGCCTGGACGTCGCCGTCGGCCGCCGCCGCCCAGCTGATCAGCAAGGACAACAAGTCCGGGATGATCGTCGCCGGCC TGAAGGGCGGCGAGAACGACGCGCAGAAGTACGCCAGCACGCTCACCCGTGAGCTGGTGCACGACCGTGACGGCGTCACC GTGCGCGCCGGCGGCATGGCCGTGGCGTATGCCCAGATCAACGCCCAGAACCAGCGGGATCTGCTGTTGATGGAGTCCAT CGCGATCCCGCTGAGCTTCGCCGTGCTGGTGTGGGTGCTCGGCGGCGTGGTGGCCGCGACGCTGCCGGTCGTGTTGGGCG CCTTGGCCATCGTCGGCACCATGTCGGTGCTGCGGCTGATCAGCTTCGCCACCGACGTGTCGACCTACGCGCTGGACCTG TCCATCGCCATGGGTCTGGCCCTGGCGATCGACTACAACCTGCTGATCATCACCCGCTACCGCGAGGAGCTGGCCCGCAC CGAGGACCGGGACCGGGCGCTGTACCGGACCATGGCCACCGCCGGGCGGACGGTGCTGTTCTCGGCCACCACCGTCGGGT TGTCGATGGCGGTGATGGCGGTGTTCCCGATGTACTTCCTGAAGTCGTCGGCCTACACCATCGTGGCCACCGCGATCATC GTCGCGATCGCCGCCGTGGTGATCACCCCGGCGGCGATCGTGTTGCTCGGGCCCCGACTGGACACGATGGACGCCCGCCG GGTGATGCATCGCATCCTGCACGGGCAGCGTTCGTTCCGGGATCCGGCGCACAAGCCGCTGGTGGAGCAGTTCTGGTACC GGTCAACGAAGTACGTGTTGCGCCGCGCCCTGCCGGTCGGGCTGAGCGTCGTCGCGCTGCTGCTGTTGCTGGGGGTGCCG TTCCTGGGCGTGAAGTGGGGCTTTCCCGACGAGCGGGTGCTGCCCCGCTCAGCGTCGGCGCGCCAGGTCGCCGACATGCT GGACAACGACTTCCCCGGCCTGGGCACCGAGCTCTCCGTCGTCGTCCCCGACGCCCGCGGCGTCACACCCACCGAACTTC GCAAATACGCCGCCGAGCTGTCCCGGGTGCCCGACGTCTCCGCGGTCAGCGCGCCGACCGGCACCTTCTCGGCCGGACAC CGGGTGGGTCCGCCCGCCGCGGCCACCGGCCTGGCCAACGGCAGCGCCTTCTTCACCGTGTCGAGCACCGCCCCGCTGTA TTCACCGGCCTCGAACGCCCAGCTCGACCGGCTGCATCAGGTCGCCGGGCCGGGCGGACGCGCCGTGCTGATGACCGGGC TGGCCCAGATCAACCGCGACAGCGTCGACGCGATCACCAAACGACTGCCGACGGTGTTCGGCCTGATCGCCGTCGTCACC TTCATGCTGCTTTTCCTGCTGACCGGCAGCGCGGTGCTGCCGGTGCAGGCGCTGGTGTGCAACGTGTTGTCGCTGACGGC GGCGTTCGGCGCGATGGTGTGGATCTTCCAGGACGGCCACCTGGGTGCGCTGGGAACCACACCCAACGGGACGCTGAACG CCAACATCCCGGTGCTGTTGTTCTGCATCGCCTTCGGCCTGGCCATGGATTACGAGGTGTTCCTCGTGTCCCGTATCCAT GAGTACTGGCTGGCCTCGCAGTCCATCCGCGAGACACCGCCGACCGCCAGGGAGGCGCGCGCCGAAACCGACGAGAGCAC CGCGCTGGGCATCGCCGGCATCGGGCGGGTGGTCACCACCGCCGCCGTGGTGATGTCGATTTCCTTCGCGGCGCTGATTC CCGCGCACGTGTCGTTCATGCGGATGCTGGGCCTGGGCCTGACCCTCGGCGTGCTCGTCGACGCCACCCTGGTGCGCATG GTGCTGGTCCCGGCGTTCATCCACCTGCTGGGCCGCTGGACGTGGTGGGCGCCGCGACCGATGGTCTGGCTGCGCGAACG GTCGGCGACCGGGGAGGCCGGCGAGGTGCGGGTGGGACGGCGGCGCTGGGCCCGCGACGCGCCGCGACCCGCGATCCGCA GGTGGCCCAGCCGGGCCACATCGGGTCGCGGTTGA
Upstream 100 bases:
>100_bases GTGCCGGATGGTCAAACCACGGGCGGCCCGCCGGCACGGCGCCGGCGAACGCGGGCCGGTGTGAGCAATTCGGCGGGTCA AACACCCCGGTTTTGGGTAG
Downstream 100 bases:
>100_bases CACGCCAATCCGCTTGTAGAGCAATAACTTTCGGAGGGAGAATCCTCGTGCCCCGAACCGAGATCATCGCCGCATTACTC GCGTTGAGCTCCGCGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MMAMLRVITRLAIAAPRRIIGIAVLVMVGAAIFGLPVVNSLSGGGFQDPTSESARATEILRDRFNQTDQQMLIVVSAPDG ARSPQAHRVGTDIVDKLKNSPWMMSVSSAWTSPSAAAAQLISKDNKSGMIVAGLKGGENDAQKYASTLTRELVHDRDGVT VRAGGMAVAYAQINAQNQRDLLLMESIAIPLSFAVLVWVLGGVVAATLPVVLGALAIVGTMSVLRLISFATDVSTYALDL SIAMGLALAIDYNLLIITRYREELARTEDRDRALYRTMATAGRTVLFSATTVGLSMAVMAVFPMYFLKSSAYTIVATAII VAIAAVVITPAAIVLLGPRLDTMDARRVMHRILHGQRSFRDPAHKPLVEQFWYRSTKYVLRRALPVGLSVVALLLLLGVP FLGVKWGFPDERVLPRSASARQVADMLDNDFPGLGTELSVVVPDARGVTPTELRKYAAELSRVPDVSAVSAPTGTFSAGH RVGPPAAATGLANGSAFFTVSSTAPLYSPASNAQLDRLHQVAGPGGRAVLMTGLAQINRDSVDAITKRLPTVFGLIAVVT FMLLFLLTGSAVLPVQALVCNVLSLTAAFGAMVWIFQDGHLGALGTTPNGTLNANIPVLLFCIAFGLAMDYEVFLVSRIH EYWLASQSIRETPPTAREARAETDESTALGIAGIGRVVTTAAVVMSISFAALIPAHVSFMRMLGLGLTLGVLVDATLVRM VLVPAFIHLLGRWTWWAPRPMVWLRERSATGEAGEVRVGRRRWARDAPRPAIRRWPSRATSGRG
Sequences:
>Translated_784_residues MMAMLRVITRLAIAAPRRIIGIAVLVMVGAAIFGLPVVNSLSGGGFQDPTSESARATEILRDRFNQTDQQMLIVVSAPDG ARSPQAHRVGTDIVDKLKNSPWMMSVSSAWTSPSAAAAQLISKDNKSGMIVAGLKGGENDAQKYASTLTRELVHDRDGVT VRAGGMAVAYAQINAQNQRDLLLMESIAIPLSFAVLVWVLGGVVAATLPVVLGALAIVGTMSVLRLISFATDVSTYALDL SIAMGLALAIDYNLLIITRYREELARTEDRDRALYRTMATAGRTVLFSATTVGLSMAVMAVFPMYFLKSSAYTIVATAII VAIAAVVITPAAIVLLGPRLDTMDARRVMHRILHGQRSFRDPAHKPLVEQFWYRSTKYVLRRALPVGLSVVALLLLLGVP FLGVKWGFPDERVLPRSASARQVADMLDNDFPGLGTELSVVVPDARGVTPTELRKYAAELSRVPDVSAVSAPTGTFSAGH RVGPPAAATGLANGSAFFTVSSTAPLYSPASNAQLDRLHQVAGPGGRAVLMTGLAQINRDSVDAITKRLPTVFGLIAVVT FMLLFLLTGSAVLPVQALVCNVLSLTAAFGAMVWIFQDGHLGALGTTPNGTLNANIPVLLFCIAFGLAMDYEVFLVSRIH EYWLASQSIRETPPTAREARAETDESTALGIAGIGRVVTTAAVVMSISFAALIPAHVSFMRMLGLGLTLGVLVDATLVRM VLVPAFIHLLGRWTWWAPRPMVWLRERSATGEAGEVRVGRRRWARDAPRPAIRRWPSRATSGRG >Mature_784_residues MMAMLRVITRLAIAAPRRIIGIAVLVMVGAAIFGLPVVNSLSGGGFQDPTSESARATEILRDRFNQTDQQMLIVVSAPDG ARSPQAHRVGTDIVDKLKNSPWMMSVSSAWTSPSAAAAQLISKDNKSGMIVAGLKGGENDAQKYASTLTRELVHDRDGVT VRAGGMAVAYAQINAQNQRDLLLMESIAIPLSFAVLVWVLGGVVAATLPVVLGALAIVGTMSVLRLISFATDVSTYALDL SIAMGLALAIDYNLLIITRYREELARTEDRDRALYRTMATAGRTVLFSATTVGLSMAVMAVFPMYFLKSSAYTIVATAII VAIAAVVITPAAIVLLGPRLDTMDARRVMHRILHGQRSFRDPAHKPLVEQFWYRSTKYVLRRALPVGLSVVALLLLLGVP FLGVKWGFPDERVLPRSASARQVADMLDNDFPGLGTELSVVVPDARGVTPTELRKYAAELSRVPDVSAVSAPTGTFSAGH RVGPPAAATGLANGSAFFTVSSTAPLYSPASNAQLDRLHQVAGPGGRAVLMTGLAQINRDSVDAITKRLPTVFGLIAVVT FMLLFLLTGSAVLPVQALVCNVLSLTAAFGAMVWIFQDGHLGALGTTPNGTLNANIPVLLFCIAFGLAMDYEVFLVSRIH EYWLASQSIRETPPTAREARAETDESTALGIAGIGRVVTTAAVVMSISFAALIPAHVSFMRMLGLGLTLGVLVDATLVRM VLVPAFIHLLGRWTWWAPRPMVWLRERSATGEAGEVRVGRRRWARDAPRPAIRRWPSRATSGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 83973; Mature: 83973
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAMLRVITRLAIAAPRRIIGIAVLVMVGAAIFGLPVVNSLSGGGFQDPTSESARATEIL CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RDRFNQTDQQMLIVVSAPDGARSPQAHRVGTDIVDKLKNSPWMMSVSSAWTSPSAAAAQL HHHHCCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHH ISKDNKSGMIVAGLKGGENDAQKYASTLTRELVHDRDGVTVRAGGMAVAYAQINAQNQRD HHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEECCCCCCC LLLMESIAIPLSFAVLVWVLGGVVAATLPVVLGALAIVGTMSVLRLISFATDVSTYALDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIAMGLALAIDYNLLIITRYREELARTEDRDRALYRTMATAGRTVLFSATTVGLSMAVMA HHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH VFPMYFLKSSAYTIVATAIIVAIAAVVITPAAIVLLGPRLDTMDARRVMHRILHGQRSFR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCHHHCC DPAHKPLVEQFWYRSTKYVLRRALPVGLSVVALLLLLGVPFLGVKWGFPDERVLPRSASA CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHH RQVADMLDNDFPGLGTELSVVVPDARGVTPTELRKYAAELSRVPDVSAVSAPTGTFSAGH HHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC RVGPPAAATGLANGSAFFTVSSTAPLYSPASNAQLDRLHQVAGPGGRAVLMTGLAQINRD CCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCH SVDAITKRLPTVFGLIAVVTFMLLFLLTGSAVLPVQALVCNVLSLTAAFGAMVWIFQDGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC LGALGTTPNGTLNANIPVLLFCIAFGLAMDYEVFLVSRIHEYWLASQSIRETPPTAREAR EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AETDESTALGIAGIGRVVTTAAVVMSISFAALIPAHVSFMRMLGLGLTLGVLVDATLVRM CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVPAFIHLLGRWTWWAPRPMVWLRERSATGEAGEVRVGRRRWARDAPRPAIRRWPSRAT HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHCCCCCCHHHHHCCCCCC SGRG CCCC >Mature Secondary Structure MMAMLRVITRLAIAAPRRIIGIAVLVMVGAAIFGLPVVNSLSGGGFQDPTSESARATEIL CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RDRFNQTDQQMLIVVSAPDGARSPQAHRVGTDIVDKLKNSPWMMSVSSAWTSPSAAAAQL HHHHCCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHH ISKDNKSGMIVAGLKGGENDAQKYASTLTRELVHDRDGVTVRAGGMAVAYAQINAQNQRD HHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEECCCCCCC LLLMESIAIPLSFAVLVWVLGGVVAATLPVVLGALAIVGTMSVLRLISFATDVSTYALDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIAMGLALAIDYNLLIITRYREELARTEDRDRALYRTMATAGRTVLFSATTVGLSMAVMA HHHHHHHHHCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH VFPMYFLKSSAYTIVATAIIVAIAAVVITPAAIVLLGPRLDTMDARRVMHRILHGQRSFR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCHHHCC DPAHKPLVEQFWYRSTKYVLRRALPVGLSVVALLLLLGVPFLGVKWGFPDERVLPRSASA CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHH RQVADMLDNDFPGLGTELSVVVPDARGVTPTELRKYAAELSRVPDVSAVSAPTGTFSAGH HHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC RVGPPAAATGLANGSAFFTVSSTAPLYSPASNAQLDRLHQVAGPGGRAVLMTGLAQINRD CCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCH SVDAITKRLPTVFGLIAVVTFMLLFLLTGSAVLPVQALVCNVLSLTAAFGAMVWIFQDGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC LGALGTTPNGTLNANIPVLLFCIAFGLAMDYEVFLVSRIHEYWLASQSIRETPPTAREAR EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AETDESTALGIAGIGRVVTTAAVVMSISFAALIPAHVSFMRMLGLGLTLGVLVDATLVRM CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVPAFIHLLGRWTWWAPRPMVWLRERSATGEAGEVRVGRRRWARDAPRPAIRRWPSRAT HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHCCCCCCHHHHHCCCCCC SGRG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]