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The map label for this gene is lppS_2

Identifier: 41408420

GI number: 41408420

Start: 2603453

End: 2604676

Strand: Reverse

Name: lppS_2

Synonym: MAP2322c

Alternate gene names: NA

Gene position: 2604676-2603453 (Counterclockwise)

Preceding gene: 41408421

Following gene: 41408417

Centisome position: 53.93

GC content: 66.42

Gene sequence:

>1224_bases
GTGCGACGTGAGATGGAAGGTCACTGGATGACGCCTTTGCGTGGACGCCGATCGTGGCTGGCAGCTGCGATGGCTTTGGT
TGCTGTGGGGGCAGTCGCCTGCGGCGGCGGCCACACGGCAGCGCCGCCCAAGGTCATCTTCGACAAGGGCACCCCGTTCG
CCGACCTGCTGGTGCCCAAGCTCACCGCCTCGGTGAGCGACGGCGCCGTCGGCGTGACGGTGGATGCGCCGGTGACGGTC
AGCGTCGCCGACGGCGTGCTGGCCTCGGTCACCATGGTCAACGAGAACGGCAGGTCGATCAGCGGGCAACTGAGCCCCGA
CGGCCTGCGCTGGTCGACCACCGAGCAGCTCGGCTACAACCGGCGTTACACGCTGACCGCGAAGGCGACCGGCCTGGGCG
GCGCGGCCAGCAAGCAGATGACCTTCGAGACCAGTTCCCCCGCGCACCTGACCATGCCCTACGTCAGCCCGGCCGACGGC
GAGGTGGTCGGCGTCGGCGAACCGGTGGCGATCCGCTTCGACGAGAACATCGCCAACCGGGCCGCGGCCCAAAAGGCCAT
CACCATCACCACCAATCCTCCGGTGGAGGGCGCCTTCTACTGGCTCAACAACCGCGAAGTGCGTTGGCGCCCAGAGCATT
TCTGGAAGTCCGGGACCGTCATCGACGTGGCCGTCAACACCTACGGGGTGGACCTGGGCGACGGCATGTTCGGCGAGGAC
AACGTCAAGACGCACTTCACCATTGGCGACGAGGTGATCTCGACCGCCGACGACACCACCAAGACGGTGACGGTGCGGGT
CAACGGTGAAGTGGTCAAGACCATGCCGACCTCGATGGGCAAGGACAGCACCCCGACGGCCAACGGCATCTACATCGTCG
GGGCGCGGTTCAAGCACATCATCATGGACTCCTCCACCTACGGCGTTCCGGTCAACTCGCCCAACGGATATCGCACCGAA
GTCGACTGGGCCACGCAGATGTCCTACAGCGGCGTCTTCGTGCACTCGGCGCCGTGGTCGGTCGGTGCCCAGGGGCACAC
CAACACCAGCCATGGCTGTCTCAACGTGAGCCCCAGCAACGCCGAATGGTTCTACGACCACAGCAAGAGCGGCGACATCG
TCGAGGTCGTGCACACCGTGGGGCCGACACTGCCCGGCACCGAGGGGCTGGGCGACTGGAACATCCCGTGGTCGCAGTGG
AAGGCGGGCAACGCCAACACCTGA

Upstream 100 bases:

>100_bases
TGCCGACACCGAACGGCCGCCGCCGGCGCGGATGCGCACGGGACGACGCCCGAAACCCATTAGAATGCCGGCAGCTACCT
GTGGTCAGCGGTGACCAACT

Downstream 100 bases:

>100_bases
CGCCGGGTCAGTCGATCTTGCGCCAGATCCCGCAGCTTCTGGTCATGAAGGCGACGTCGGTCGGCAGGATCCGGACGACC
TGGGCGCCGTCGCCGACGTT

Product: LppS_2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRREMEGHWMTPLRGRRSWLAAAMALVAVGAVACGGGHTAAPPKVIFDKGTPFADLLVPKLTASVSDGAVGVTVDAPVTV
SVADGVLASVTMVNENGRSISGQLSPDGLRWSTTEQLGYNRRYTLTAKATGLGGAASKQMTFETSSPAHLTMPYVSPADG
EVVGVGEPVAIRFDENIANRAAAQKAITITTNPPVEGAFYWLNNREVRWRPEHFWKSGTVIDVAVNTYGVDLGDGMFGED
NVKTHFTIGDEVISTADDTTKTVTVRVNGEVVKTMPTSMGKDSTPTANGIYIVGARFKHIIMDSSTYGVPVNSPNGYRTE
VDWATQMSYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAEWFYDHSKSGDIVEVVHTVGPTLPGTEGLGDWNIPWSQW
KAGNANT

Sequences:

>Translated_407_residues
MRREMEGHWMTPLRGRRSWLAAAMALVAVGAVACGGGHTAAPPKVIFDKGTPFADLLVPKLTASVSDGAVGVTVDAPVTV
SVADGVLASVTMVNENGRSISGQLSPDGLRWSTTEQLGYNRRYTLTAKATGLGGAASKQMTFETSSPAHLTMPYVSPADG
EVVGVGEPVAIRFDENIANRAAAQKAITITTNPPVEGAFYWLNNREVRWRPEHFWKSGTVIDVAVNTYGVDLGDGMFGED
NVKTHFTIGDEVISTADDTTKTVTVRVNGEVVKTMPTSMGKDSTPTANGIYIVGARFKHIIMDSSTYGVPVNSPNGYRTE
VDWATQMSYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAEWFYDHSKSGDIVEVVHTVGPTLPGTEGLGDWNIPWSQW
KAGNANT
>Mature_407_residues
MRREMEGHWMTPLRGRRSWLAAAMALVAVGAVACGGGHTAAPPKVIFDKGTPFADLLVPKLTASVSDGAVGVTVDAPVTV
SVADGVLASVTMVNENGRSISGQLSPDGLRWSTTEQLGYNRRYTLTAKATGLGGAASKQMTFETSSPAHLTMPYVSPADG
EVVGVGEPVAIRFDENIANRAAAQKAITITTNPPVEGAFYWLNNREVRWRPEHFWKSGTVIDVAVNTYGVDLGDGMFGED
NVKTHFTIGDEVISTADDTTKTVTVRVNGEVVKTMPTSMGKDSTPTANGIYIVGARFKHIIMDSSTYGVPVNSPNGYRTE
VDWATQMSYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAEWFYDHSKSGDIVEVVHTVGPTLPGTEGLGDWNIPWSQW
KAGNANT

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 43402; Mature: 43402

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRREMEGHWMTPLRGRRSWLAAAMALVAVGAVACGGGHTAAPPKVIFDKGTPFADLLVPK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCHHHHHHHH
LTASVSDGAVGVTVDAPVTVSVADGVLASVTMVNENGRSISGQLSPDGLRWSTTEQLGYN
HHCCCCCCEEEEEECCCEEEEECCCCEEEEEEEECCCCEEECEECCCCCEECCHHHHCCC
RRYTLTAKATGLGGAASKQMTFETSSPAHLTMPYVSPADGEVVGVGEPVAIRFDENIANR
CEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCCCEEECCCCEEEEECCCHHHH
AAAQKAITITTNPPVEGAFYWLNNREVRWRPEHFWKSGTVIDVAVNTYGVDLGDGMFGED
HHHCEEEEEECCCCCCEEEEEECCCEEEECHHHHCCCCCEEEEEEEEEEEECCCCCCCCC
NVKTHFTIGDEVISTADDTTKTVTVRVNGEVVKTMPTSMGKDSTPTANGIYIVGARFKHI
CCEEEEEECHHHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCEEEE
IMDSSTYGVPVNSPNGYRTEVDWATQMSYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSN
EECCCCCCEECCCCCCCEEEEEHHHEECCCEEEEECCCCCCCCCCCCCCCCCEEEECCCC
AEWFYDHSKSGDIVEVVHTVGPTLPGTEGLGDWNIPWSQWKAGNANT
CEEEEECCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRREMEGHWMTPLRGRRSWLAAAMALVAVGAVACGGGHTAAPPKVIFDKGTPFADLLVPK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCHHHHHHHH
LTASVSDGAVGVTVDAPVTVSVADGVLASVTMVNENGRSISGQLSPDGLRWSTTEQLGYN
HHCCCCCCEEEEEECCCEEEEECCCCEEEEEEEECCCCEEECEECCCCCEECCHHHHCCC
RRYTLTAKATGLGGAASKQMTFETSSPAHLTMPYVSPADGEVVGVGEPVAIRFDENIANR
CEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCCCEEECCCCEEEEECCCHHHH
AAAQKAITITTNPPVEGAFYWLNNREVRWRPEHFWKSGTVIDVAVNTYGVDLGDGMFGED
HHHCEEEEEECCCCCCEEEEEECCCEEEECHHHHCCCCCEEEEEEEEEEEECCCCCCCCC
NVKTHFTIGDEVISTADDTTKTVTVRVNGEVVKTMPTSMGKDSTPTANGIYIVGARFKHI
CCEEEEEECHHHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEECCEEEE
IMDSSTYGVPVNSPNGYRTEVDWATQMSYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSN
EECCCCCCEECCCCCCCEEEEEHHHEECCCEEEEECCCCCCCCCCCCCCCCCEEEECCCC
AEWFYDHSKSGDIVEVVHTVGPTLPGTEGLGDWNIPWSQWKAGNANT
CEEEEECCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]