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The map label for this gene is ybeY [C]

Identifier: 41408257

GI number: 41408257

Start: 2391944

End: 2392477

Strand: Reverse

Name: ybeY [C]

Synonym: MAP2159c

Alternate gene names: 41408257

Gene position: 2392477-2391944 (Counterclockwise)

Preceding gene: 41408258

Following gene: 41408252

Centisome position: 49.54

GC content: 66.67

Gene sequence:

>534_bases
ATGAGCATTGAGGTGTCCAACGAGTCGGGTATCGACGTCTCCGAAGCCGAGCTGATCAGCGTCGCGCGGTTCGTCATCGC
CAAGATGGACGTCAATCCGGCGGCCGAGCTGTCCATGGTGCTGCTGGACACCGCGGCGATGGCCGATCTGCACATGCGCT
GGATGGACCTGCCCGGGCCGACCGACGTGATGAGCTTCCCGATGGACGAGCTGGAGCCGGGCGGCCGCCCGGATGCCCCG
GAGCCGGGGCCCGCGATGCTGGGCGACATCGTGCTGTGCCCGGAATTCGCCGCCGATCAGGCGGCCGCGGCCGGGCACAG
CCTGGGGCACGAGTTGGCGCTGCTGACCATCCACGGGGTGCTGCATCTGCTCGGCTACGACCACGGCGAACCGGACGAGG
AAAAGGAGATGTTCGCCCTCCAGGACCGGTTGCTCGAGGAATGGGTGGCCGATCAGGTGGAGGCCTACCACCAGGACCGC
CAGCAGGAGCGCGACCGCCGATTGCTGGACAAGTCAAGGTATTTCGACCATTGA

Upstream 100 bases:

>100_bases
TATGCGAAGTTTGAAGAGCCCGGCCTGACCATGAACCGGGCGGCGCGACGGGCGTCGGGCTCGCGCGGTCGTCGATGATG
GTGTGCGGTGAGCGGGATCT

Downstream 100 bases:

>100_bases
GGCCATCTAAACACTGTACCTGACCAGGTAAAACGTGCTGAAACGGCAACTCAGTTCAGTCAAATATCTTTGACTCAGTT
AACTCCTTCATCGCAACGCG

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSIEVSNESGIDVSEAELISVARFVIAKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAP
EPGPAMLGDIVLCPEFAADQAAAAGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQDRLLEEWVADQVEAYHQDR
QQERDRRLLDKSRYFDH

Sequences:

>Translated_177_residues
MSIEVSNESGIDVSEAELISVARFVIAKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAP
EPGPAMLGDIVLCPEFAADQAAAAGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQDRLLEEWVADQVEAYHQDR
QQERDRRLLDKSRYFDH
>Mature_176_residues
SIEVSNESGIDVSEAELISVARFVIAKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPE
PGPAMLGDIVLCPEFAADQAAAAGHSLGHELALLTIHGVLHLLGYDHGEPDEEKEMFALQDRLLEEWVADQVEAYHQDRQ
QERDRRLLDKSRYFDH

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 19661; Mature: 19530

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEVSNESGIDVSEAELISVARFVIAKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGP
CEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAADQAAAAGHSLGHELALLTIHGV
HHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LHLLGYDHGEPDEEKEMFALQDRLLEEWVADQVEAYHQDRQQERDRRLLDKSRYFDH
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIEVSNESGIDVSEAELISVARFVIAKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGP
EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAADQAAAAGHSLGHELALLTIHGV
HHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LHLLGYDHGEPDEEKEMFALQDRLLEEWVADQVEAYHQDRQQERDRRLLDKSRYFDH
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA