| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is phoH
Identifier: 41408258
GI number: 41408258
Start: 2392500
End: 2393558
Strand: Reverse
Name: phoH
Synonym: MAP2160c
Alternate gene names: 41408258
Gene position: 2393558-2392500 (Counterclockwise)
Preceding gene: 41408259
Following gene: 41408257
Centisome position: 49.56
GC content: 67.52
Gene sequence:
>1059_bases GTGACGCCCCGCGACACCAGCGCTGCTGACGCAGCCGGAGCCCTCCAGGCCGACGCTCAAGTTCGCATCAGCATCGATGT TCCGCCCGACATCGTCATGGGCCTGCTGGGTTCGGCAGACGAGAACCTGCGCGCCCTGGAACGCAGCGTGATCGCCGACC TGCACGTGCGCGGCAACGCCATCACCATCTCCGGTGAGTCCGCCGATGTCGCCCGCGCCGAACGGGTGATCTCCGAGCTC GTCGCGATCGTCGCCAACGGCCAGGTGCTGACGCCGGAGGTGGTCCGGCACAGCGTCGCCATGCTGGCCGGCACCGACAA CGAGTCACCGGCCGAGGTACTGACGCTGGACATCTTGTCCCGGCGCGGCAAGACGATCCGGCCCAAGACCCTCAACCAGA AGCGCTACGTCGACGCCATCGACGCCAACACCATCGTGTTCGGGGTCGGCCCGGCCGGCACCGGCAAGACCTATCTGGCG ATGGCCAAGGCGGTCAACGCGTTGCAGACCAAGCAGGTCAGCCGCATCATCTTGACCCGGCCGGCGGTGGAAGCCGGTGA GCGCCTTGGCTTTCTGCCGGGCACGCTGAGCGAGAAGATCGACCCGTATCTGCGGCCGCTGTATGACGCCCTGTACGACA TGATGGACCCCGAGGTGATCCCGAAGCTGATGTCGGCCGGGGTCATCGAGGTGGCGCCGCTGGCCTACATGCGCGGCCGC ACCCTGAATTCGGCGTTCATCGTGCTCGACGAGGCCCAGAACACCACCGCCGAGCAGATGAAGATGTTCCTCACCCGGCT GGGTTTCGGGTCCAAGATCGTCGTCACCGGCGACATCACCCAGGTCGACCTGCCCGGCGGCGCCACGTCGGGCCTGCGCT CGGCGATGGAGATCCTGGACCGCGTCGACGACATCCACGTCGCCGAGCTGACCAGCGTGGACGTGGTGCGCCACCGGCTG GTGTCGGAGATCGTCGACGCCTATGCGAAGTTTGAAGAGCCCGGCCTGACCATGAACCGGGCGGCGCGACGGGCGTCGGG CTCGCGCGGTCGTCGATGA
Upstream 100 bases:
>100_bases CGCCTGAACATTGGGGTCAGCGTCGCGGCGGCGGTAGGATTAAAACGCCAGAAATCGCCGCGATCGGCCAGAACTTCAGA AGGCAGGCATCGAAAACCAC
Downstream 100 bases:
>100_bases TGGTGTGCGGTGAGCGGGATCTATGAGCATTGAGGTGTCCAACGAGTCGGGTATCGACGTCTCCGAAGCCGAGCTGATCA GCGTCGCGCGGTTCGTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTPRDTSAADAAGALQADAQVRISIDVPPDIVMGLLGSADENLRALERSVIADLHVRGNAITISGESADVARAERVISEL VAIVANGQVLTPEVVRHSVAMLAGTDNESPAEVLTLDILSRRGKTIRPKTLNQKRYVDAIDANTIVFGVGPAGTGKTYLA MAKAVNALQTKQVSRIILTRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPEVIPKLMSAGVIEVAPLAYMRGR TLNSAFIVLDEAQNTTAEQMKMFLTRLGFGSKIVVTGDITQVDLPGGATSGLRSAMEILDRVDDIHVAELTSVDVVRHRL VSEIVDAYAKFEEPGLTMNRAARRASGSRGRR
Sequences:
>Translated_352_residues MTPRDTSAADAAGALQADAQVRISIDVPPDIVMGLLGSADENLRALERSVIADLHVRGNAITISGESADVARAERVISEL VAIVANGQVLTPEVVRHSVAMLAGTDNESPAEVLTLDILSRRGKTIRPKTLNQKRYVDAIDANTIVFGVGPAGTGKTYLA MAKAVNALQTKQVSRIILTRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPEVIPKLMSAGVIEVAPLAYMRGR TLNSAFIVLDEAQNTTAEQMKMFLTRLGFGSKIVVTGDITQVDLPGGATSGLRSAMEILDRVDDIHVAELTSVDVVRHRL VSEIVDAYAKFEEPGLTMNRAARRASGSRGRR >Mature_351_residues TPRDTSAADAAGALQADAQVRISIDVPPDIVMGLLGSADENLRALERSVIADLHVRGNAITISGESADVARAERVISELV AIVANGQVLTPEVVRHSVAMLAGTDNESPAEVLTLDILSRRGKTIRPKTLNQKRYVDAIDANTIVFGVGPAGTGKTYLAM AKAVNALQTKQVSRIILTRPAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPEVIPKLMSAGVIEVAPLAYMRGRT LNSAFIVLDEAQNTTAEQMKMFLTRLGFGSKIVVTGDITQVDLPGGATSGLRSAMEILDRVDDIHVAELTSVDVVRHRLV SEIVDAYAKFEEPGLTMNRAARRASGSRGRR
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=309, Percent_Identity=50.4854368932039, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI1787257, Length=212, Percent_Identity=44.811320754717, Blast_Score=190, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004087 - InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 37813; Mature: 37682
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRDTSAADAAGALQADAQVRISIDVPPDIVMGLLGSADENLRALERSVIADLHVRGNA CCCCCCCCHHHHHCEECCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCE ITISGESADVARAERVISELVAIVANGQVLTPEVVRHSVAMLAGTDNESPAEVLTLDILS EEEECCCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RRGKTIRPKTLNQKRYVDAIDANTIVFGVGPAGTGKTYLAMAKAVNALQTKQVSRIILTR HCCCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPEVIPKLMSAGVIEVAPLAYMRGR CCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCC TLNSAFIVLDEAQNTTAEQMKMFLTRLGFGSKIVVTGDITQVDLPGGATSGLRSAMEILD CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHH RVDDIHVAELTSVDVVRHRLVSEIVDAYAKFEEPGLTMNRAARRASGSRGRR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure TPRDTSAADAAGALQADAQVRISIDVPPDIVMGLLGSADENLRALERSVIADLHVRGNA CCCCCCCHHHHHCEECCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCE ITISGESADVARAERVISELVAIVANGQVLTPEVVRHSVAMLAGTDNESPAEVLTLDILS EEEECCCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RRGKTIRPKTLNQKRYVDAIDANTIVFGVGPAGTGKTYLAMAKAVNALQTKQVSRIILTR HCCCCCCCCCCCHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PAVEAGERLGFLPGTLSEKIDPYLRPLYDALYDMMDPEVIPKLMSAGVIEVAPLAYMRGR CCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCC TLNSAFIVLDEAQNTTAEQMKMFLTRLGFGSKIVVTGDITQVDLPGGATSGLRSAMEILD CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHH RVDDIHVAELTSVDVVRHRLVSEIVDAYAKFEEPGLTMNRAARRASGSRGRR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]