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The map label for this gene is speA [H]

Identifier: 41408242

GI number: 41408242

Start: 2373873

End: 2375330

Strand: Direct

Name: speA [H]

Synonym: MAP2144

Alternate gene names: 41408242

Gene position: 2373873-2375330 (Clockwise)

Preceding gene: 41408241

Following gene: 41408246

Centisome position: 49.15

GC content: 69.62

Gene sequence:

>1458_bases
ATGGACCAATCCGACGCACCTTTGCTCAACGCGCTGGCCGACTATCGCGACAAGAACCGGTACGGGTTCGCGCCGCCCGG
GCACCGGCAGGGCCGCGGCACCGACGATCGGGTCCTCGCGGTGCTGGGCCGCGAGCCCTTTCTCGACGACGTGCTGGCCA
GCGGCGGGCTCGACGACCGTCGCGCCAGCAACGGCTACCTGCAGCGCGCGGAGGACCTGATGGCCGAGGCCGTCGGCGCC
GAGATCGCCTGGTTCTCCACCTGCGGCAGCTCCCTGTCGGTGCGCGCGGCGATGATGGCGGTGGCCGGTGGGCAGGGCAG
CCTGCTGGTCGGCCGGGACAGCCACAAGTCGATCGTGGCGGGGCTGATCTTCTCCGGGGTGCAGCCGCGCTGGATCACTC
CCCGCTGGGACGCCGAGCGCCACTTTTCTCATCCGCCCTCGCCGCAGCAGGTCGAAGAGGCCTGGGACAAGCATCCCGAT
GCCGCCGGTGCGCTGGTCGTCAGCCCCAGCCCGTACGGCACCTGCGCCGACATCGCCGGCATCGCCGAGGTGTGTCATCG
GCGGGGCAAGCCGTTGATCCTCGACGAGGCGTGGGGGGCGCATCTGCCGTTCCACGAGGACCTGCCAACCTGGGCGATGG
ATGCCGGCGCCGACGTGTGCGTGGTCAGCGTGCACAAGATGGGCGCCGGTTTCGAGCAGGGCTCGGTGTTCCACGTCCAG
GGCGACCTCATCGACCGGGACCGCCTCTCGGCGTGCGCGGATCTGCTGATGACCACCAGCCCCAACGTCCTGATCTACGC
GGCGATGGATGGCTGGCGCCGGCAGATGGTGCAGCACGGTCACCAATTGCTCGGCGCTGCATTGGATTTGGCGCGGCAGG
TGCGCGACGAGATCGAGCTCATTCCCGATGTGGAGGTGCTCGACGACGAGCTGCTGGGCGTGCAGGCGTCCCACGACCTG
GACCGCATGCAGGTGCTGATCGACGTATGCGGCACCGGCACATCGGGTTATCAGGCCGCCGACTGGCTGCGCGAGCACGC
GCGCATCGACGTGGGCATGAGCGACCACCGCCGCATCCTGGCCACCTTGTCCATGGCCGACGACAAGGAGACGTTGGGTC
GTCTCACCGATGCGCTGCGGGCGTGGCGCACCGCGGCGCAGGACTTCGACCCCGCCCCCCGGATCGCGCTGCCGTCGCCG
TCCGAAATGCAGTTGGAGACGGTCGAATTGCCACGCGACGCGTTTTTCGGACGGGTGCAGGAGGTGCCGACCAAAACCGC
CGCCGGCCGGATCGCCGCCGAACAGATCACGCCCTATCCCCCGGGCATCCCCGCCGTCGTCCCCGGCGAGCGGCTCAATG
ATGCTGTGCTGGACTACCTTTGCTCCGGGGTGGCCGCGGGGATGAACCTGCCCGACGCGGCCGATCCGTCGCTGCAGACC
ATCCGGGTGCTCGCCTGA

Upstream 100 bases:

>100_bases
CCGGCCAGCCCGCGCCCACCGGGTGACGGCCGTCCGCGACGAGCGCGCCGGCGGCCGGCCGCGGCGAGTCGGCCGTGCAC
AACCGGGGTATCCGAGCGCA

Downstream 100 bases:

>100_bases
GGCGTCACCCGAGCAACTGGCGCACCTCGCCGGTCACCTCGTCCACCGGCACGTCGGCCACCAGCGATGCCCGCAGCCCG
CCCGGTCCGTTCGGGTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MDQSDAPLLNALADYRDKNRYGFAPPGHRQGRGTDDRVLAVLGREPFLDDVLASGGLDDRRASNGYLQRAEDLMAEAVGA
EIAWFSTCGSSLSVRAAMMAVAGGQGSLLVGRDSHKSIVAGLIFSGVQPRWITPRWDAERHFSHPPSPQQVEEAWDKHPD
AAGALVVSPSPYGTCADIAGIAEVCHRRGKPLILDEAWGAHLPFHEDLPTWAMDAGADVCVVSVHKMGAGFEQGSVFHVQ
GDLIDRDRLSACADLLMTTSPNVLIYAAMDGWRRQMVQHGHQLLGAALDLARQVRDEIELIPDVEVLDDELLGVQASHDL
DRMQVLIDVCGTGTSGYQAADWLREHARIDVGMSDHRRILATLSMADDKETLGRLTDALRAWRTAAQDFDPAPRIALPSP
SEMQLETVELPRDAFFGRVQEVPTKTAAGRIAAEQITPYPPGIPAVVPGERLNDAVLDYLCSGVAAGMNLPDAADPSLQT
IRVLA

Sequences:

>Translated_485_residues
MDQSDAPLLNALADYRDKNRYGFAPPGHRQGRGTDDRVLAVLGREPFLDDVLASGGLDDRRASNGYLQRAEDLMAEAVGA
EIAWFSTCGSSLSVRAAMMAVAGGQGSLLVGRDSHKSIVAGLIFSGVQPRWITPRWDAERHFSHPPSPQQVEEAWDKHPD
AAGALVVSPSPYGTCADIAGIAEVCHRRGKPLILDEAWGAHLPFHEDLPTWAMDAGADVCVVSVHKMGAGFEQGSVFHVQ
GDLIDRDRLSACADLLMTTSPNVLIYAAMDGWRRQMVQHGHQLLGAALDLARQVRDEIELIPDVEVLDDELLGVQASHDL
DRMQVLIDVCGTGTSGYQAADWLREHARIDVGMSDHRRILATLSMADDKETLGRLTDALRAWRTAAQDFDPAPRIALPSP
SEMQLETVELPRDAFFGRVQEVPTKTAAGRIAAEQITPYPPGIPAVVPGERLNDAVLDYLCSGVAAGMNLPDAADPSLQT
IRVLA
>Mature_485_residues
MDQSDAPLLNALADYRDKNRYGFAPPGHRQGRGTDDRVLAVLGREPFLDDVLASGGLDDRRASNGYLQRAEDLMAEAVGA
EIAWFSTCGSSLSVRAAMMAVAGGQGSLLVGRDSHKSIVAGLIFSGVQPRWITPRWDAERHFSHPPSPQQVEEAWDKHPD
AAGALVVSPSPYGTCADIAGIAEVCHRRGKPLILDEAWGAHLPFHEDLPTWAMDAGADVCVVSVHKMGAGFEQGSVFHVQ
GDLIDRDRLSACADLLMTTSPNVLIYAAMDGWRRQMVQHGHQLLGAALDLARQVRDEIELIPDVEVLDDELLGVQASHDL
DRMQVLIDVCGTGTSGYQAADWLREHARIDVGMSDHRRILATLSMADDKETLGRLTDALRAWRTAAQDFDPAPRIALPSP
SEMQLETVELPRDAFFGRVQEVPTKTAAGRIAAEQITPYPPGIPAVVPGERLNDAVLDYLCSGVAAGMNLPDAADPSLQT
IRVLA

Specific function: Catalyzes the formation of agmatine from arginine [H]

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

Organism=Escherichia coli, GI1786384, Length=328, Percent_Identity=24.390243902439, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI221142684, Length=300, Percent_Identity=24.6666666666667, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 52488; Mature: 52488

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSDAPLLNALADYRDKNRYGFAPPGHRQGRGTDDRVLAVLGREPFLDDVLASGGLDDR
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHCCCCCCH
RASNGYLQRAEDLMAEAVGAEIAWFSTCGSSLSVRAAMMAVAGGQGSLLVGRDSHKSIVA
HCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHH
GLIFSGVQPRWITPRWDAERHFSHPPSPQQVEEAWDKHPDAAGALVVSPSPYGTCADIAG
HHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHH
IAEVCHRRGKPLILDEAWGAHLPFHEDLPTWAMDAGADVCVVSVHKMGAGFEQGSVFHVQ
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEEHHHHCCCCCCCCEEEEE
GDLIDRDRLSACADLLMTTSPNVLIYAAMDGWRRQMVQHGHQLLGAALDLARQVRDEIEL
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDVEVLDDELLGVQASHDLDRMQVLIDVCGTGTSGYQAADWLREHARIDVGMSDHRRIL
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCHHHHHH
ATLSMADDKETLGRLTDALRAWRTAAQDFDPAPRIALPSPSEMQLETVELPRDAFFGRVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
EVPTKTAAGRIAAEQITPYPPGIPAVVPGERLNDAVLDYLCSGVAAGMNLPDAADPSLQT
HCCCHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHE
IRVLA
EEECC
>Mature Secondary Structure
MDQSDAPLLNALADYRDKNRYGFAPPGHRQGRGTDDRVLAVLGREPFLDDVLASGGLDDR
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHCCCCCCH
RASNGYLQRAEDLMAEAVGAEIAWFSTCGSSLSVRAAMMAVAGGQGSLLVGRDSHKSIVA
HCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHH
GLIFSGVQPRWITPRWDAERHFSHPPSPQQVEEAWDKHPDAAGALVVSPSPYGTCADIAG
HHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHH
IAEVCHRRGKPLILDEAWGAHLPFHEDLPTWAMDAGADVCVVSVHKMGAGFEQGSVFHVQ
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEEHHHHCCCCCCCCEEEEE
GDLIDRDRLSACADLLMTTSPNVLIYAAMDGWRRQMVQHGHQLLGAALDLARQVRDEIEL
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDVEVLDDELLGVQASHDLDRMQVLIDVCGTGTSGYQAADWLREHARIDVGMSDHRRIL
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCHHHHHH
ATLSMADDKETLGRLTDALRAWRTAAQDFDPAPRIALPSPSEMQLETVELPRDAFFGRVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
EVPTKTAAGRIAAEQITPYPPGIPAVVPGERLNDAVLDYLCSGVAAGMNLPDAADPSLQT
HCCCHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHE
IRVLA
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]