Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408226

Identifier: 41408226

GI number: 41408226

Start: 2358123

End: 2358758

Strand: Reverse

Name: 41408226

Synonym: MAP2128c

Alternate gene names: NA

Gene position: 2358758-2358123 (Counterclockwise)

Preceding gene: 41408228

Following gene: 41408219

Centisome position: 48.84

GC content: 74.84

Gene sequence:

>636_bases
ATGGAGTTCCTGGTTGCCGCGACGACCCAGGTTCCCGACGGCACCCCCGCGGAAGCGGTCGACGACCTGCGGGCCCGGGT
ATCCGCACGCTGCCGTGAGCTGGCTCGGCAGGGGCAGTTGCTGCGCTTGTGGCGCGCGCCGTCGCCGCCCGGCCGGTGGC
GCACGCTGGGCCTGTTCGCCGCGGCCGACGACAACGCGCTGGAACAGCTGCTCGCCTCGACGCCGCTGCGGGCATGGCGC
ACCGAGGAGGTGACGCCGCTGCCGGTGCACCCGAACGACCCGACCGCACGCCTGATCACCCCGGAGCCGGTTTCGGGCGG
GACCGCCGAGTTTCTGCAGGCCATCACCATCCGGGTTCCCGCCGACGCGCCGCAGCGGGTGGTCGACGACGTGCTGGCCC
GTGAGGCCGAGCGCGCCGGCGAGCTGGGCGCGCAGGGCTGCCTGCAGCGGCTGTGGTGGCTGCATTCCGGGCCGGGCGAG
CCGCGCGTGCTGGCGCTGTGGCGCACCGCGGACACCGAGAGCCTGGCGGCCGTACTGCGCTCGCTGCCGCTGCACGCCTG
GCTGCAGGTGGACACCACGACGCCGCTGCACACCCATCCGGACGACCCGGTCAGCGGCTCACTGGCGGGCCGTTAG

Upstream 100 bases:

>100_bases
CATTCGGCTGTTAACCGAAGGGTTCCTGGTTCGAGTCCAGGCGGGGGAGCACTTTCTGCAGCGCCCGGCGTCGGTGAGCA
CGAATCACTTGGGAGACCCG

Downstream 100 bases:

>100_bases
CGAATCATCCTGTCGCGCACTGGCTTTCCAGGTCAGCGCCGGGAGCGTTGCCCGGAGCCGGCGCCAGGCCGAGATGCTCG
CGCAGCGTAATGCCGCGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Muconolactone Delta-Isomerase

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MEFLVAATTQVPDGTPAEAVDDLRARVSARCRELARQGQLLRLWRAPSPPGRWRTLGLFAAADDNALEQLLASTPLRAWR
TEEVTPLPVHPNDPTARLITPEPVSGGTAEFLQAITIRVPADAPQRVVDDVLAREAERAGELGAQGCLQRLWWLHSGPGE
PRVLALWRTADTESLAAVLRSLPLHAWLQVDTTTPLHTHPDDPVSGSLAGR

Sequences:

>Translated_211_residues
MEFLVAATTQVPDGTPAEAVDDLRARVSARCRELARQGQLLRLWRAPSPPGRWRTLGLFAAADDNALEQLLASTPLRAWR
TEEVTPLPVHPNDPTARLITPEPVSGGTAEFLQAITIRVPADAPQRVVDDVLAREAERAGELGAQGCLQRLWWLHSGPGE
PRVLALWRTADTESLAAVLRSLPLHAWLQVDTTTPLHTHPDDPVSGSLAGR
>Mature_211_residues
MEFLVAATTQVPDGTPAEAVDDLRARVSARCRELARQGQLLRLWRAPSPPGRWRTLGLFAAADDNALEQLLASTPLRAWR
TEEVTPLPVHPNDPTARLITPEPVSGGTAEFLQAITIRVPADAPQRVVDDVLAREAERAGELGAQGCLQRLWWLHSGPGE
PRVLALWRTADTESLAAVLRSLPLHAWLQVDTTTPLHTHPDDPVSGSLAGR

Specific function: Unknown

COG id: COG4829

COG function: function code Q; Muconolactone delta-isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22978; Mature: 22978

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLVAATTQVPDGTPAEAVDDLRARVSARCRELARQGQLLRLWRAPSPPGRWRTLGLFA
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEE
AADDNALEQLLASTPLRAWRTEEVTPLPVHPNDPTARLITPEPVSGGTAEFLQAITIRVP
ECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHEECC
ADAPQRVVDDVLAREAERAGELGAQGCLQRLWWLHSGPGEPRVLALWRTADTESLAAVLR
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHH
SLPLHAWLQVDTTTPLHTHPDDPVSGSLAGR
HCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFLVAATTQVPDGTPAEAVDDLRARVSARCRELARQGQLLRLWRAPSPPGRWRTLGLFA
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEE
AADDNALEQLLASTPLRAWRTEEVTPLPVHPNDPTARLITPEPVSGGTAEFLQAITIRVP
ECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHEECC
ADAPQRVVDDVLAREAERAGELGAQGCLQRLWWLHSGPGEPRVLALWRTADTESLAAVLR
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHH
SLPLHAWLQVDTTTPLHTHPDDPVSGSLAGR
HCCCEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA