| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is mmpI [H]
Identifier: 41408219
GI number: 41408219
Start: 2349935
End: 2350858
Strand: Reverse
Name: mmpI [H]
Synonym: MAP2121c
Alternate gene names: 41408219
Gene position: 2350858-2349935 (Counterclockwise)
Preceding gene: 41408226
Following gene: 41408218
Centisome position: 48.67
GC content: 66.45
Gene sequence:
>924_bases ATGACGTCGGCTCAAAATGAGTCTCAAGCACTTGGTGATCTGGCTGCCAGGCAACTCGCCAACGCAACCAAGACCGTCCC CCAGCTCTCGACGATCACGCCGCGCTGGCTGCTGCACCTGCTGAACTGGGTTCCGGTGGAGGCGGGCATCTACCGGGTGA ACCGGGTGGTCAATCCCGAGCAGGTCGCCATCAAGGCCGAGGCCGGCGCCGGCAGTGAAGAGCCGCTACCGCAGACCTAT GTGGACTACGAGACCAGCCCGCGCGAGTACACGCTGCGCAGCATTTCCACGCTGGTCGACATCCACACCCGGGTCTCCGA CCTGTACTCGAGCCCGCACGATCAGATCGCCCAGCAGCTGCGGCTGACCATCGAGACCATCAAGGAGCGCCAGGAGCTGG AGCTGATCAACAGCCCCGAGTATGGGCTGCTGGCCCAGGCGACGCCGGAGCAGACGATCCAGACGCTGGCCGGGGCTCCC ACGCCCGACGACCTCGACGCGCTGATCACCAAGGTGTGGAAGACGCCCAGTTTCTTCCTGACCCACCCGCTGGGCATCGC GGCGTTCGGGCGCGAGGCCACCTACCGGGGGGTGCCGCCGCCGGTGGTGAGCCTGTTCGGCGCCCAGTTCATCACCTGGC GCGGTATTCCGCTGATCCCGTCGGACAAGGTGCCGGTGGAGGACGGCAAGACGAAGTTCATCCTGGTCCGCACCGGCGAG GAACGTCAGGGCGTCGTCGGGCTGTTCCAGCCCGGCCTGGTCGGGGAGCAGGCGCCGGGGCTGTCGGTGCGGTTCACCGG CATCAACCAGTCGGCGATCGCGACCTACCTGGTCACGCTGTACACCTCCCTGGCCGTCCTGACCGATGACGCGCTCGCCG TGCTCGACGACGTCGCGGTGGATCAGTTCCATGAGTACAAGTGA
Upstream 100 bases:
>100_bases GACGCACAACACCGGCTCGGCGCGCGGCCCGGGCCCCGATGGGGCACGATGAATCCACCGATCCGGGCCGCATTTTTCGA CCACGCACGAAAGGATCACG
Downstream 100 bases:
>100_bases GTACCGAGCGGTAGACGCCGAAAGCGACCTGCCCATCAGCGCCGCGGAACTCGCCGCGCTGGCCAGCCAGCTGTATGCGG CCAGCATCCGCCCGGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: 35 kDa antigen; Major membrane protein I; MMP-I [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTSAQNESQALGDLAARQLANATKTVPQLSTITPRWLLHLLNWVPVEAGIYRVNRVVNPEQVAIKAEAGAGSEEPLPQTY VDYETSPREYTLRSISTLVDIHTRVSDLYSSPHDQIAQQLRLTIETIKERQELELINSPEYGLLAQATPEQTIQTLAGAP TPDDLDALITKVWKTPSFFLTHPLGIAAFGREATYRGVPPPVVSLFGAQFITWRGIPLIPSDKVPVEDGKTKFILVRTGE ERQGVVGLFQPGLVGEQAPGLSVRFTGINQSAIATYLVTLYTSLAVLTDDALAVLDDVAVDQFHEYK
Sequences:
>Translated_307_residues MTSAQNESQALGDLAARQLANATKTVPQLSTITPRWLLHLLNWVPVEAGIYRVNRVVNPEQVAIKAEAGAGSEEPLPQTY VDYETSPREYTLRSISTLVDIHTRVSDLYSSPHDQIAQQLRLTIETIKERQELELINSPEYGLLAQATPEQTIQTLAGAP TPDDLDALITKVWKTPSFFLTHPLGIAAFGREATYRGVPPPVVSLFGAQFITWRGIPLIPSDKVPVEDGKTKFILVRTGE ERQGVVGLFQPGLVGEQAPGLSVRFTGINQSAIATYLVTLYTSLAVLTDDALAVLDDVAVDQFHEYK >Mature_306_residues TSAQNESQALGDLAARQLANATKTVPQLSTITPRWLLHLLNWVPVEAGIYRVNRVVNPEQVAIKAEAGAGSEEPLPQTYV DYETSPREYTLRSISTLVDIHTRVSDLYSSPHDQIAQQLRLTIETIKERQELELINSPEYGLLAQATPEQTIQTLAGAPT PDDLDALITKVWKTPSFFLTHPLGIAAFGREATYRGVPPPVVSLFGAQFITWRGIPLIPSDKVPVEDGKTKFILVRTGEE RQGVVGLFQPGLVGEQAPGLSVRFTGINQSAIATYLVTLYTSLAVLTDDALAVLDDVAVDQFHEYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm, cytosol (Probable). Membrane; Peripheral membrane protein (Probable). Note=Soluble or peripheral membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae mmpI and Synechococcus PCC 7942 srpI [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33672; Mature: 33540
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAQNESQALGDLAARQLANATKTVPQLSTITPRWLLHLLNWVPVEAGIYRVNRVVNPE CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCHH QVAIKAEAGAGSEEPLPQTYVDYETSPREYTLRSISTLVDIHTRVSDLYSSPHDQIAQQL HEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RLTIETIKERQELELINSPEYGLLAQATPEQTIQTLAGAPTPDDLDALITKVWKTPSFFL HHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE THPLGIAAFGREATYRGVPPPVVSLFGAQFITWRGIPLIPSDKVPVEDGKTKFILVRTGE ECCCCHHHHCCCCCCCCCCHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCEEEEEEECCC ERQGVVGLFQPGLVGEQAPGLSVRFTGINQSAIATYLVTLYTSLAVLTDDALAVLDDVAV CCCCEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH DQFHEYK HHHHCCC >Mature Secondary Structure TSAQNESQALGDLAARQLANATKTVPQLSTITPRWLLHLLNWVPVEAGIYRVNRVVNPE CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCHH QVAIKAEAGAGSEEPLPQTYVDYETSPREYTLRSISTLVDIHTRVSDLYSSPHDQIAQQL HEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RLTIETIKERQELELINSPEYGLLAQATPEQTIQTLAGAPTPDDLDALITKVWKTPSFFL HHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE THPLGIAAFGREATYRGVPPPVVSLFGAQFITWRGIPLIPSDKVPVEDGKTKFILVRTGE ECCCCHHHHCCCCCCCCCCHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCEEEEEEECCC ERQGVVGLFQPGLVGEQAPGLSVRFTGINQSAIATYLVTLYTSLAVLTDDALAVLDDVAV CCCCEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH DQFHEYK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8945562 [H]