| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408212
Identifier: 41408212
GI number: 41408212
Start: 2340222
End: 2341400
Strand: Reverse
Name: 41408212
Synonym: MAP2114c
Alternate gene names: NA
Gene position: 2341400-2340222 (Counterclockwise)
Preceding gene: 41408213
Following gene: 41408211
Centisome position: 48.48
GC content: 67.01
Gene sequence:
>1179_bases ATGACGTGGAAGCTACCCAAATCACCCGCCCCGCAACGGCCCTTGATGCTGGGCGTGCTGGGAACCGTCATCCTGGCCTG CGTCACCGTCGTCGCCTTCCAGTACAACAAGCTGCCGTTCATCAAGAACACCGACGACTACGCGGCCTACTTCTCCGAGG CCGGCGGCATCAAACCCGGCAACGCGGTGCGGGTTTCCGGCATGGGCGTGGGCCGGGTCTCGGATCTGCGCCTGGAGGGC ACCAAGGTGCGGATCGGATTCACCGTCCGCAAGGGCGTCGTCCTGGGCGATCGCACCGAGGCGGCGATCAAAACCGAAAC GATCCTGGGCGCCAAGATGTTGGAGCTGACCCCGCGCGGGGACGGGCGGCTCTCGGGCGTCATTCCGCTGGAACGCACCA CCTCGCCCTACGATCTGCCCGACGCCCTGGGCGATCTGACCACCACCATCAGCGGCCTGGACACCACCCAACTCTCCGCG GCCCTGACCACGCTGGCCGACACCCTCAAAGCCACACCGGAGAACCTCAAGCCCGCGCTGCAGGGCGTCGCCCGGTTCTC CGACACCCTCAACAGCCGCGACGCGCAGCTGCGTAGCCTGCTGGGCAACGCCAATCACGTCTCGGCGGTGCTGGGCCGGC GCAGCCAGCAGATCGCCGGGCTGGTGGCCAACTCCCACGCGCTGCTGGCCGCGCTGCTGGACGAACGGGATTCGCTGGAC GCGTTGATGAATCACCTCACCGCGGTGTCGCATCAGATCAGCGGGCTGGTCAACGACAACCGAACCCAGCTCAAACCCGC GCTGGACAAGCTCAACGGTGTGCTCGAGATCCTGGACAACCGCAAGGAGGAGCTGCAGAAAACGCTGCCCAAGTTCAAAC GGTATGCGATGTCGTTCGGCGAATGCCTGGGCTCGGGGCCGTTTTTCAAGGCCTACGTGGCCAACCTGGTGCCCGGCCAG TTCGGTGGACCGGTGTTGGACGCGGACATGTACGACCGTTTCCTGGACCCCGATCAGAAGCTGCCCTCGGAGGTGGTGGA TCCGCCGACGGGGACTCCGCCGGTGCCGCCGGAGAACGCGCCGGTGCCGCTGTGGTCGCAGCCGCCGTCGCCGCCGCCGT CCACGCCACCGGTGCGGACCATCCCGCCGCCCTCGCCCCACGAATTCGATCAGCCATGA
Upstream 100 bases:
>100_bases GCTTCTACTTCTGCGAAGTGCTGCTGAAGCTCAACGGCAAAGGCGGCAACCCGATCTTCGTCAAATTGCTGGGTCAGCCC AGCGGGCGGTGCACACCGAA
Downstream 100 bases:
>100_bases CCATCACTCGAGACGCCCTGCGCAAGGCGACCGCGCTGAGCCTGGTCCTGACGCTGGCCGTGGCGAGCGTGCTGGTCGGC GGCAAGCTGTGGCGGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE Family Protein; Mce Family C; MCE-Family Protein; Mce-Family C; Mce-Related Protein; MCE-Family B; Mce Family Protein Mce5C
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTWKLPKSPAPQRPLMLGVLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPGNAVRVSGMGVGRVSDLRLEG TKVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRGDGRLSGVIPLERTTSPYDLPDALGDLTTTISGLDTTQLSA ALTTLADTLKATPENLKPALQGVARFSDTLNSRDAQLRSLLGNANHVSAVLGRRSQQIAGLVANSHALLAALLDERDSLD ALMNHLTAVSHQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKTLPKFKRYAMSFGECLGSGPFFKAYVANLVPGQ FGGPVLDADMYDRFLDPDQKLPSEVVDPPTGTPPVPPENAPVPLWSQPPSPPPSTPPVRTIPPPSPHEFDQP
Sequences:
>Translated_392_residues MTWKLPKSPAPQRPLMLGVLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPGNAVRVSGMGVGRVSDLRLEG TKVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRGDGRLSGVIPLERTTSPYDLPDALGDLTTTISGLDTTQLSA ALTTLADTLKATPENLKPALQGVARFSDTLNSRDAQLRSLLGNANHVSAVLGRRSQQIAGLVANSHALLAALLDERDSLD ALMNHLTAVSHQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKTLPKFKRYAMSFGECLGSGPFFKAYVANLVPGQ FGGPVLDADMYDRFLDPDQKLPSEVVDPPTGTPPVPPENAPVPLWSQPPSPPPSTPPVRTIPPPSPHEFDQP >Mature_391_residues TWKLPKSPAPQRPLMLGVLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPGNAVRVSGMGVGRVSDLRLEGT KVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRGDGRLSGVIPLERTTSPYDLPDALGDLTTTISGLDTTQLSAA LTTLADTLKATPENLKPALQGVARFSDTLNSRDAQLRSLLGNANHVSAVLGRRSQQIAGLVANSHALLAALLDERDSLDA LMNHLTAVSHQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKTLPKFKRYAMSFGECLGSGPFFKAYVANLVPGQF GGPVLDADMYDRFLDPDQKLPSEVVDPPTGTPPVPPENAPVPLWSQPPSPPPSTPPVRTIPPPSPHEFDQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42072; Mature: 41941
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWKLPKSPAPQRPLMLGVLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC NAVRVSGMGVGRVSDLRLEGTKVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRG CEEEEECCCCCCCCCEEECCCEEEEEEEEECCEEECCCCCHHHHHHHHHCCHHEEECCCC DGRLSGVIPLERTTSPYDLPDALGDLTTTISGLDTTQLSAALTTLADTLKATPENLKPAL CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH QGVARFSDTLNSRDAQLRSLLGNANHVSAVLGRRSQQIAGLVANSHALLAALLDERDSLD HHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCHHHH ALMNHLTAVSHQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKTLPKFKRYAMSFG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ECLGSGPFFKAYVANLVPGQFGGPVLDADMYDRFLDPDQKLPSEVVDPPTGTPPVPPENA HHHCCCCHHHHHHHHHCCCCCCCCEECHHHHHHHCCCCHHCCHHHCCCCCCCCCCCCCCC PVPLWSQPPSPPPSTPPVRTIPPPSPHEFDQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TWKLPKSPAPQRPLMLGVLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC NAVRVSGMGVGRVSDLRLEGTKVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRG CEEEEECCCCCCCCCEEECCCEEEEEEEEECCEEECCCCCHHHHHHHHHCCHHEEECCCC DGRLSGVIPLERTTSPYDLPDALGDLTTTISGLDTTQLSAALTTLADTLKATPENLKPAL CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH QGVARFSDTLNSRDAQLRSLLGNANHVSAVLGRRSQQIAGLVANSHALLAALLDERDSLD HHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCHHHH ALMNHLTAVSHQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKTLPKFKRYAMSFG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ECLGSGPFFKAYVANLVPGQFGGPVLDADMYDRFLDPDQKLPSEVVDPPTGTPPVPPENA HHHCCCCHHHHHHHHHCCCCCCCCEECHHHHHHHCCCCHHCCHHHCCCCCCCCCCCCCCC PVPLWSQPPSPPPSTPPVRTIPPPSPHEFDQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA