| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408213
Identifier: 41408213
GI number: 41408213
Start: 2341397
End: 2342425
Strand: Reverse
Name: 41408213
Synonym: MAP2115c
Alternate gene names: NA
Gene position: 2342425-2341397 (Counterclockwise)
Preceding gene: 41408214
Following gene: 41408212
Centisome position: 48.5
GC content: 66.47
Gene sequence:
>1029_bases ATGAGAAGGAAATTGTCGAGCATCGCCTGGCGGGTGGCGATCTTCACCGCGGTCTGCCTGCTGTTCACCTTCACGCTCAT CGCGGTGTTCGGTCAGCTGCGCTTCGAGGACCGCACCGGCTACCAAGCGGTGTTCACCAACATCTCCGGCCTGAAGTCTG GCAACTTCGTGCGCATCGCCGGGGTGGAGGTCGGCAAGGTCGGCGATCTCACCCTGCACCGGGACGGCACCGTCACCGTC GGCTTCGCGGTCGACAAGGGCGTGCGGCTCAGCGAGGGCACCAAGGCGGTGGTGCGTTACGAAAACCTGATCGGCGACCG CTATCTGGCGCTGGAGGAAGGCCCGGGCTCGCCGCGCCGGCTGCCGCCGGGCGCGACGATTCCGCTGGCGCGCACCTCGC CGGCGCTCGACCTGGACGCGCTGATCGGCGGGTTCCGTCCGCTGTTCCGGGCGCTGGACCCCGATCAGGTCAACGCCCTG TCCGGCCAATTGCTGCGCATCTTCCAGGGGCAGGGCGGCACCCTGGCCTCGGTGCTGTCGCAGACCTCGATGCTGACCTC GACCCTGGCCGGGCGCAGCCAGCTCATCGGCGAGCTCATCACCAACCTGAACACCGTGTTGCGCACCTTCGCCACCCGCG ACCACGAATTCTCCGACGGCCTGGACAAACTGGCGCAGTTGGTCGATGGGCTGGCCCAGCGCCGCGACGACATCTCCACC GGGCTCGCCTACATCAACGCGGCCGCCGGCTCCATCACCGACCTGCTCTCCCAGTCCCGCCAGCCCCTCAAAGACGTTGT GCAGCAAACGGATCGGATGTCCGGGCAGGTGCTCTCCGACCGCGACTACGTCGACAACCTGCTCAAGGAGCTGCCCGACA TCTACCAGGTGCTGGCCCGCCAGGGCCTCAACGGCGACTACTTCGGCTTCTACTTCTGCGAAGTGCTGCTGAAGCTCAAC GGCAAAGGCGGCAACCCGATCTTCGTCAAATTGCTGGGTCAGCCCAGCGGGCGGTGCACACCGAAATGA
Upstream 100 bases:
>100_bases ACGTGGCCGCGGGTAACCCGTGGTGGGCCAACTGGTTCCCGACCACCAAGAACCCGCCCGAAGCGCCGCGCTACTTCTGG CGGGGAGGGCAGCCACCGCC
Downstream 100 bases:
>100_bases CGTGGAAGCTACCCAAATCACCCGCCCCGCAACGGCCCTTGATGCTGGGCGTGCTGGGAACCGTCATCCTGGCCTGCGTC ACCGTCGTCGCCTTCCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; Mammalian Cell Entry Related Domain Protein; MCE Family Protein; MCE-Family B; MCE-Family Protein; Mce Family D; Mce-Related Protein; MCE-Family C; Mce Family B; Virulence Factor MCE-Like Protein; Mce Family C; Mce Family Protein Mce5B; MCE-Family; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRRKLSSIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIAGVEVGKVGDLTLHRDGTVTV GFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGATIPLARTSPALDLDALIGGFRPLFRALDPDQVNAL SGQLLRIFQGQGGTLASVLSQTSMLTSTLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDIST GLAYINAAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIYQVLARQGLNGDYFGFYFCEVLLKLN GKGGNPIFVKLLGQPSGRCTPK
Sequences:
>Translated_342_residues MRRKLSSIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIAGVEVGKVGDLTLHRDGTVTV GFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGATIPLARTSPALDLDALIGGFRPLFRALDPDQVNAL SGQLLRIFQGQGGTLASVLSQTSMLTSTLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDIST GLAYINAAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIYQVLARQGLNGDYFGFYFCEVLLKLN GKGGNPIFVKLLGQPSGRCTPK >Mature_342_residues MRRKLSSIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIAGVEVGKVGDLTLHRDGTVTV GFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGATIPLARTSPALDLDALIGGFRPLFRALDPDQVNAL SGQLLRIFQGQGGTLASVLSQTSMLTSTLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDIST GLAYINAAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIYQVLARQGLNGDYFGFYFCEVLLKLN GKGGNPIFVKLLGQPSGRCTPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37169; Mature: 37169
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKLSSIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEE GVEVGKVGDLTLHRDGTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRR CEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCC LPPGATIPLARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH QTSMLTSTLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLAYINAAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIYQVLAR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH QGLNGDYFGFYFCEVLLKLNGKGGNPIFVKLLGQPSGRCTPK CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MRRKLSSIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAVFTNISGLKSGNFVRIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEE GVEVGKVGDLTLHRDGTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRR CEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCC LPPGATIPLARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH QTSMLTSTLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLAYINAAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIYQVLAR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH QGLNGDYFGFYFCEVLLKLNGKGGNPIFVKLLGQPSGRCTPK CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA