| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408211
Identifier: 41408211
GI number: 41408211
Start: 2338891
End: 2340225
Strand: Reverse
Name: 41408211
Synonym: MAP2113c
Alternate gene names: NA
Gene position: 2340225-2338891 (Counterclockwise)
Preceding gene: 41408212
Following gene: 41408210
Centisome position: 48.45
GC content: 67.57
Gene sequence:
>1335_bases ATGACCATCACTCGAGACGCCCTGCGCAAGGCGACCGCGCTGAGCCTGGTCCTGACGCTGGCCGTGGCGAGCGTGCTGGT CGGCGGCAAGCTGTGGCGGGCCGTCGAAAAGAACAGCTACGCGGCGTATTTCGCGGAGACCAACGGCTTGTTCGTCGGCG ACGAGGTCCGCATCCTCGGCGTCGCCGTCGGCGCGATCGACAAGATCGAACCCCAATCCGCCGGCTCGAAAGTGACGTTC TCCGTCGACAAGAAGTACGCGATCCCGGCCGCTGCCCGCGCCGCCGTGCTGTCGCCATCGCTGGTGACCGCCCGGGCGAT CCAGCTGGTGCCGGCATACTCCGGTGGGCCCACATTGAGCCCCGGCGCGGCGATCCCGCTGAGCCGCACCGCGGTTCCGG TGGAGTGGGACGATTTCCGCAAGCAGCTGGAGAAACTGACCGACGCGCTGCAGCCCACCACCGCGGGCGGGGTGAACTCG GTCGGCGAATTCGTCAACTCGGCCGCCGACAATCTCCGCGGCCAGGGGGACACCGCCCGCGACACGGTACTCAAGCTCTC CGAAGCGATTTCGGCGCTCGGTGACCACGCCGATGACATCTTCAGCACGGTGCGCAACCTGCAACTGCTGGTGTCCGCGC TGTACTCCAGCAGCGACCTGCTGGCCTCGTTCAACACCAACCTGGCCGCCGTGACGACCCTGCTGACCAACACGCCCAAC GAGGTGGGCAGTGCGCTGAAGTCGCTGGACGGGGCGCTGAGCGATGTGCGCGATTTCCTGGCGGAGAACCGCGAGGCGAT GGGTGTCACGGTCGACCGCCTGGGCTCCATCACCACCGCGCTCAACGACAGTCGCGGTGACGTCAAGCAGATCCTGCACA TCGCCCCCACGGTGTTCCAGAACTTCTTGAACATCTACCAGCCGGCCCAGAGCGCGATGACGGGCATCCTGGCGCTGAAC AACTTCGCCGATATTCCCCAATTCATCTGCAGCTCAATCGAAGCGGCGTCGCGGGCCCGGCTGGCGCGGGTATCCAAACT GTGCCTGCAATACCTCAACCCGATCATCAAGAACCGCATCTACAACTACATCCCGGCGGGGATCAACCCGTTCGTCGGTA CCCAGGCCCGCCCCAGCGAGATCACCTACAGCGAGGACTGGCTGCGGCCCGGGTACACGCCCCCGGACGGCGGCCCGCCC CCCGAGGCGCCGGCGCCTCCCGGCCAGCCCGCGCCCGCCGATCAGCCGCCCGCCGAACCCGGCCCGCCACCGAACCCGAC GAGCAACTCGCTGCAGGTGCTGCGGGACCTGATGCTGCCGACGGGGCCGTCATGA
Upstream 100 bases:
>100_bases ACGCGCCGGTGCCGCTGTGGTCGCAGCCGCCGTCGCCGCCGCCGTCCACGCCACCGGTGCGGACCATCCCGCCGCCCTCG CCCCACGAATTCGATCAGCC
Downstream 100 bases:
>100_bases GACGCGCGGTCGTCGCAGCACTCGTGGTAGCTTGCGCGGCAGCGCTTTCCGGGTGCGGCTGGCGTGGCTTGAATTCGCTG CGGCTGCCCGGCACCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; Mce Family D; MCE-Family Protein; Mce-Related Protein; MCE-Family; Virulence Factor MCE-Like Protein; LOW QUALITY PROTEIN Protein
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEPQSAGSKVTF SVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNS VGEFVNSAADNLRGQGDTARDTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQPAQSAMTGILALN NFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRIYNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPP PEAPAPPGQPAPADQPPAEPGPPPNPTSNSLQVLRDLMLPTGPS
Sequences:
>Translated_444_residues MTITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEPQSAGSKVTF SVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNS VGEFVNSAADNLRGQGDTARDTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQPAQSAMTGILALN NFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRIYNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPP PEAPAPPGQPAPADQPPAEPGPPPNPTSNSLQVLRDLMLPTGPS >Mature_443_residues TITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEPQSAGSKVTFS VDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSV GEFVNSAADNLRGQGDTARDTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPNE VGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQPAQSAMTGILALNN FADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRIYNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPPP EAPAPPGQPAPADQPPAEPGPPPNPTSNSLQVLRDLMLPTGPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46869; Mature: 46737
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEEEE VAVGAIDKIEPQSAGSKVTFSVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLS EHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCC PGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSVGEFVNSAADNLRGQGDTAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH DTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCH EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQ HHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NFLNIYQPAQSAMTGILALNNFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPPPEAPAPPGQPAPADQPPAEP HHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPPPNPTSNSLQVLRDLMLPTGPS CCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TITRDALRKATALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCEEEEE VAVGAIDKIEPQSAGSKVTFSVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLS EHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCC PGAAIPLSRTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSVGEFVNSAADNLRGQGDTAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH DTVLKLSEAISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCH EVGSALKSLDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQ HHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NFLNIYQPAQSAMTGILALNNFADIPQFICSSIEAASRARLARVSKLCLQYLNPIIKNRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNYIPAGINPFVGTQARPSEITYSEDWLRPGYTPPDGGPPPEAPAPPGQPAPADQPPAEP HHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPPPNPTSNSLQVLRDLMLPTGPS CCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA