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The map label for this gene is 41408058

Identifier: 41408058

GI number: 41408058

Start: 2163747

End: 2164499

Strand: Direct

Name: 41408058

Synonym: MAP1960

Alternate gene names: NA

Gene position: 2163747-2164499 (Clockwise)

Preceding gene: 41408057

Following gene: 41408060

Centisome position: 44.8

GC content: 71.98

Gene sequence:

>753_bases
ATGGCTAAATCCCGCTCTGCCGCCGACAACAAGGCGGCCCGCGCGCAGGCGCAGGCCGCCCGCAAGGCCGCCGCGCGCGA
GCGCCGCGCCCAGTTGTGGCAGGCGTTCAACATCCAGCGCCAGGAGGACAAGCGCCTGCTGCCCTACATGATCGGCGCCT
TCCTGCTGGTCGTGGGCGTGTCGGTGGGTGTGGGCGTCTGGGCCGGCGGGCTGACCATGATCACCTTGATCCCGTTCGGC
GTGGTGCTGGGCGCGCTGGTCGCCTTCATCGTGTTCGGGCGCCGCGCGCAGAAATCGGTGTACCGCAAGGCCGAGGGCCA
AACCGGCGCGGCGGCATGGGCTTTGGACAATCTGCGCGGCAAGTGGCGGGTGACCCCCGGGGTGGCGGCGACCGGCCACT
TCGACGCCGTGCACCGCGTCATCGGCCGGCCGGGCGTGATCCTGGTCGGCGAGGGCTCGCCGACCCGGGTGCGGCCGCTG
CTGGCGCAGGAGAAAAAGCGCACCGCCCGGCTGATCGGCGACGTGCCGATCTACGACATCATCGTCGGCAACGGCGAAGA
CGAGGTGCCGCTGGCCAAGCTGGAGCGCCACCTGACCCGGCTGCCGGCCAACATCACCGTCAAGCAGATGGACACCCTCG
AGTCGCGGCTGGCCGCCCTGGGGTCGCGGGCCGGGGCCGCCGTCATGCCCAAGGGCCCGCTGCCCAACGCCGGCAAGATG
CGCGGGGTGCAGCGCACCGTCCGCCGCAAGTAG

Upstream 100 bases:

>100_bases
GCCGGGCCGCTGGTGCGCTCGTCGTACCGCGCCGGGCGGCTCTACCGGCAGACCGCCCGCGCCCGCGCCTAGCCGCCACG
GCGCTACGTATTCTTTGACT

Downstream 100 bases:

>100_bases
CTCCCGCGCCGATCGCAAAGCGCGGCCGGGCGCAGCGGGTCGCCGCCATCGGCAGAGCTCAGCGCCGCACCACGGCCGTC
GCGGTCAGCCGGTCCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYMIGAFLLVVGVSVGVGVWAGGLTMITLIPFG
VVLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVILVGEGSPTRVRPL
LAQEKKRTARLIGDVPIYDIIVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNAGKM
RGVQRTVRRK

Sequences:

>Translated_250_residues
MAKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYMIGAFLLVVGVSVGVGVWAGGLTMITLIPFG
VVLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVILVGEGSPTRVRPL
LAQEKKRTARLIGDVPIYDIIVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNAGKM
RGVQRTVRRK
>Mature_249_residues
AKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYMIGAFLLVVGVSVGVGVWAGGLTMITLIPFGV
VLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVILVGEGSPTRVRPLL
AQEKKRTARLIGDVPIYDIIVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNAGKMR
GVQRTVRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021315 [H]

Pfam domain/function: PF11139 DUF2910 [H]

EC number: NA

Molecular weight: Translated: 26962; Mature: 26831

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYMIGAFLLVVGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVGVGVWAGGLTMITLIPFGVVLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHCCCC
KWRVTPGVAATGHFDAVHRVIGRPGVILVGEGSPTRVRPLLAQEKKRTARLIGDVPIYDI
CEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
IVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNAGKM
EECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
RGVQRTVRRK
HHHHHHHCCC
>Mature Secondary Structure 
AKSRSAADNKAARAQAQAARKAAARERRAQLWQAFNIQRQEDKRLLPYMIGAFLLVVGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVGVGVWAGGLTMITLIPFGVVLGALVAFIVFGRRAQKSVYRKAEGQTGAAAWALDNLRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHCCCC
KWRVTPGVAATGHFDAVHRVIGRPGVILVGEGSPTRVRPLLAQEKKRTARLIGDVPIYDI
CEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
IVGNGEDEVPLAKLERHLTRLPANITVKQMDTLESRLAALGSRAGAAVMPKGPLPNAGKM
EECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
RGVQRTVRRK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]