| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407980
Identifier: 41407980
GI number: 41407980
Start: 2079525
End: 2079794
Strand: Direct
Name: 41407980
Synonym: MAP1882
Alternate gene names: NA
Gene position: 2079525-2079794 (Clockwise)
Preceding gene: 41407979
Following gene: 41407981
Centisome position: 43.06
GC content: 69.63
Gene sequence:
>270_bases TTGACGGCGGCGCGGCGCGCCCGTTTGCCCGCGGGCTGGGACAGCGAGCTGTCCGATGAATACGAGTGGGTGCCGCTGCG TCTGCCGCCGGAGGTGACCCGGGTCAGCGCGTCCACCCGGTTGTCCATCGAGGCCGAATACCGCGGCTGGGAGTTGACCA GGGTGCGGCTGTACACCGACGGCAGCAGGCGAGTGTTGTTGCGCCGCAAGAAATCTCGCGTCGATGCTGGCGGCTTCGAG GGGCGGCGGCCCGACCAGCCGCAACTGTGA
Upstream 100 bases:
>100_bases AACCGAACTCCCTGGCCTTCGACGAAGCGTCGGACACCCTGTACGTGGTGTCCGGGTCCGGCGCGGGAGTTCAGGTGATC GACCACGCGGCGGGTAAACG
Downstream 100 bases:
>100_bases GCGGGGCGCCCCCGGCACCACGCGGCGGCGGCCATCGCTGGTATGGCGTGGCGCGGCAACTGTTTTTCCTGGTACCCGCC GAGCGGATTCACACGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTAARRARLPAGWDSELSDEYEWVPLRLPPEVTRVSASTRLSIEAEYRGWELTRVRLYTDGSRRVLLRRKKSRVDAGGFE GRRPDQPQL
Sequences:
>Translated_89_residues MTAARRARLPAGWDSELSDEYEWVPLRLPPEVTRVSASTRLSIEAEYRGWELTRVRLYTDGSRRVLLRRKKSRVDAGGFE GRRPDQPQL >Mature_88_residues TAARRARLPAGWDSELSDEYEWVPLRLPPEVTRVSASTRLSIEAEYRGWELTRVRLYTDGSRRVLLRRKKSRVDAGGFEG RRPDQPQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10342; Mature: 10211
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAARRARLPAGWDSELSDEYEWVPLRLPPEVTRVSASTRLSIEAEYRGWELTRVRLYTD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEEEECCCCEEEEEEEEEEC GSRRVLLRRKKSRVDAGGFEGRRPDQPQL CCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAARRARLPAGWDSELSDEYEWVPLRLPPEVTRVSASTRLSIEAEYRGWELTRVRLYTD CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEEEECCCCEEEEEEEEEEC GSRRVLLRRKKSRVDAGGFEGRRPDQPQL CCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA