| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lppL
Identifier: 41407979
GI number: 41407979
Start: 2078401
End: 2079528
Strand: Direct
Name: lppL
Synonym: MAP1881
Alternate gene names: NA
Gene position: 2078401-2079528 (Clockwise)
Preceding gene: 41407958
Following gene: 41407980
Centisome position: 43.03
GC content: 71.37
Gene sequence:
>1128_bases TTGTCCCGCCGTCGCACCCAGGGAAACCCATTGCTGTTACCACACGCGCTGCTCCGGCGAGGGCGCCACAAGCTGGCGAT TCAAGGCTGCATTTGGGGTGTCGCGCTTTTGCTGAGCGGGTGTTCGTCGAATCCGCTGCGCGGCGCGCCCCCGACCATCG AACCCGCGGGCGCGGCCGTGTCGCCGCCGTCAGCGCAGCAGCCGGCCGGGTCGGTGCGGCCACTGGCCGCGCACGCCGCG GCGGCGGTGTTCGACGCCGGCACCCACCAGCTGGCGGTGCTGGCCGCGGCTTCCGATCCGGCCAGCGTCACCCTGTTCGG CGACCCGCAGGTCCCGCCGCGGGTCGCCGCCCTGCCCGGCCCGGCGACCGCGTTGACCGGCGACGGCCGCGGCACGGTCT ACCTGGCCACACGCGGCGGCTACTTCGTGCTGGATCTGGCCACCGGCCGCGTCGTGCGGGTGGGCGTCGCCGATGCGGCG CAGACCGAGTTCACCGCGGTGGCCCAACGCGCCGACGGGGTCCTGGTGTTGGGCAGCGCCGACGGCGCCGTCTACACGCT GGCCTCCCCGACGCCGGCCGTGCCTACCGCTGGGCCTACCACTGGGTCTACCACTGGGTCTACCGCGGCCGTCGCCAACC GGAACAAGATCTTCGCGCGGGTCGATTCGCTTGTCACCCAAGGCAATACGACGGTGGTGCTGGACCGCGGGCAGACCTCG GTGACCACGATCGGCGCCGACGGCCGGGCCCAGCAGGCGCTGCGGGCCGGCCGGGGCGCCACCACCATGGCCGCCGACGC GGCGGGGCGGGTGCTGGTGGTCGACACCCGCGGCGGCCAGTTGCTGGTGTACGGCGTGGATCCGCTGATCCTGCGTCAGG CCTACCCGGTTTCTCAGGCGCCCTACGGCCTGGCCGGTTCCCGCGCGTTAGCCTGGGTTTCGCAGACCGTTTCCAATATC GTCATTGGTTACGATCTGTCCACCGGAATTCCCGTCGAAAAGGTGCGTTACCCGACCGTGCAGCAACCGAACTCCCTGGC CTTCGACGAAGCGTCGGACACCCTGTACGTGGTGTCCGGGTCCGGCGCGGGAGTTCAGGTGATCGACCACGCGGCGGGTA AACGTTGA
Upstream 100 bases:
>100_bases GGTCAGCGGTGACGGCCATAGGCCGACCATACCTCGCCCCCGGGCCCGGACGCAGGCAGCACGGCCCGGTTGGATGCGAA ACCGTTCCCTAAAATTTGTC
Downstream 100 bases:
>100_bases CGGCGGCGCGGCGCGCCCGTTTGCCCGCGGGCTGGGACAGCGAGCTGTCCGATGAATACGAGTGGGTGCCGCTGCGTCTG CCGCCGGAGGTGACCCGGGT
Product: LppL
Products: NA
Alternate protein names: Lipoprotein LppL; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Prolipoprotein LppL; LppL Protein
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSRRRTQGNPLLLPHALLRRGRHKLAIQGCIWGVALLLSGCSSNPLRGAPPTIEPAGAAVSPPSAQQPAGSVRPLAAHAA AAVFDAGTHQLAVLAAASDPASVTLFGDPQVPPRVAALPGPATALTGDGRGTVYLATRGGYFVLDLATGRVVRVGVADAA QTEFTAVAQRADGVLVLGSADGAVYTLASPTPAVPTAGPTTGSTTGSTAAVANRNKIFARVDSLVTQGNTTVVLDRGQTS VTTIGADGRAQQALRAGRGATTMAADAAGRVLVVDTRGGQLLVYGVDPLILRQAYPVSQAPYGLAGSRALAWVSQTVSNI VIGYDLSTGIPVEKVRYPTVQQPNSLAFDEASDTLYVVSGSGAGVQVIDHAAGKR
Sequences:
>Translated_375_residues MSRRRTQGNPLLLPHALLRRGRHKLAIQGCIWGVALLLSGCSSNPLRGAPPTIEPAGAAVSPPSAQQPAGSVRPLAAHAA AAVFDAGTHQLAVLAAASDPASVTLFGDPQVPPRVAALPGPATALTGDGRGTVYLATRGGYFVLDLATGRVVRVGVADAA QTEFTAVAQRADGVLVLGSADGAVYTLASPTPAVPTAGPTTGSTTGSTAAVANRNKIFARVDSLVTQGNTTVVLDRGQTS VTTIGADGRAQQALRAGRGATTMAADAAGRVLVVDTRGGQLLVYGVDPLILRQAYPVSQAPYGLAGSRALAWVSQTVSNI VIGYDLSTGIPVEKVRYPTVQQPNSLAFDEASDTLYVVSGSGAGVQVIDHAAGKR >Mature_374_residues SRRRTQGNPLLLPHALLRRGRHKLAIQGCIWGVALLLSGCSSNPLRGAPPTIEPAGAAVSPPSAQQPAGSVRPLAAHAAA AVFDAGTHQLAVLAAASDPASVTLFGDPQVPPRVAALPGPATALTGDGRGTVYLATRGGYFVLDLATGRVVRVGVADAAQ TEFTAVAQRADGVLVLGSADGAVYTLASPTPAVPTAGPTTGSTTGSTAAVANRNKIFARVDSLVTQGNTTVVLDRGQTSV TTIGADGRAQQALRAGRGATTMAADAAGRVLVVDTRGGQLLVYGVDPLILRQAYPVSQAPYGLAGSRALAWVSQTVSNIV IGYDLSTGIPVEKVRYPTVQQPNSLAFDEASDTLYVVSGSGAGVQVIDHAAGKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38031; Mature: 37899
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRRTQGNPLLLPHALLRRGRHKLAIQGCIWGVALLLSGCSSNPLRGAPPTIEPAGAAV CCCCCCCCCEEEECHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SPPSAQQPAGSVRPLAAHAAAAVFDAGTHQLAVLAAASDPASVTLFGDPQVPPRVAALPG CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCC PATALTGDGRGTVYLATRGGYFVLDLATGRVVRVGVADAAQTEFTAVAQRADGVLVLGSA CCEEEECCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECC DGAVYTLASPTPAVPTAGPTTGSTTGSTAAVANRNKIFARVDSLVTQGNTTVVLDRGQTS CCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCE VTTIGADGRAQQALRAGRGATTMAADAAGRVLVVDTRGGQLLVYGVDPLILRQAYPVSQA EEEECCCCHHHHHHHCCCCCCEEECCCCCCEEEEECCCCEEEEECCCHHHHHCCCCCCCC PYGLAGSRALAWVSQTVSNIVIGYDLSTGIPVEKVRYPTVQQPNSLAFDEASDTLYVVSG CCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHEECCCCCCCCCEECCCCCCEEEEEEC SGAGVQVIDHAAGKR CCCCEEEEECCCCCC >Mature Secondary Structure SRRRTQGNPLLLPHALLRRGRHKLAIQGCIWGVALLLSGCSSNPLRGAPPTIEPAGAAV CCCCCCCCEEEECHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SPPSAQQPAGSVRPLAAHAAAAVFDAGTHQLAVLAAASDPASVTLFGDPQVPPRVAALPG CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCC PATALTGDGRGTVYLATRGGYFVLDLATGRVVRVGVADAAQTEFTAVAQRADGVLVLGSA CCEEEECCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECC DGAVYTLASPTPAVPTAGPTTGSTTGSTAAVANRNKIFARVDSLVTQGNTTVVLDRGQTS CCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCE VTTIGADGRAQQALRAGRGATTMAADAAGRVLVVDTRGGQLLVYGVDPLILRQAYPVSQA EEEECCCCHHHHHHHCCCCCCEEECCCCCCEEEEECCCCEEEEECCCHHHHHCCCCCCCC PYGLAGSRALAWVSQTVSNIVIGYDLSTGIPVEKVRYPTVQQPNSLAFDEASDTLYVVSG CCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHEECCCCCCCCCEECCCCCCEEEEEEC SGAGVQVIDHAAGKR CCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA