| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407950
Identifier: 41407950
GI number: 41407950
Start: 2030512
End: 2031567
Strand: Direct
Name: 41407950
Synonym: MAP1852
Alternate gene names: NA
Gene position: 2030512-2031567 (Clockwise)
Preceding gene: 41407949
Following gene: 41407951
Centisome position: 42.04
GC content: 65.06
Gene sequence:
>1056_bases ATGAGGTTTCGCGGCCCGCTCATCGCGCTGACGCTGTTCATGATCGTCTCGCTGACGCTGACCTGGCTGGTGTATGTGAG CCTGCGCCGCGACGTGGCCGGCGATACGGCCCGGTATTCGGCGGTGTTCAGCGATGTGTACGGGCTGCGCGAAGGTGACG ACGTCCGGATGGCCGGGGTGCGGGTGGGCCGGGTCGAAAAGATCGAACTGGACGGAAAATTGGCGAAGGTCTCCTTCGTG GTGCAGTCCGAACAGCGGCTGTATGGAAACACCCTGGCGTCGGTCACCTACCAGAACATCGTCGGCCAGCGCTATCTCGG CCTGTCGTTGGGCAAGGAGGGCAATCCAGCGCAGCTTCCGCCGGGCAGCACCATTCCGCTGGAACGCACCGAACCCTCCT TCGACGTCACCACGCTGCTCAACGGCTACGAACCGTTGTTCAGCTTGCTCAACCCGCACGACGCCGACAACCTGACCAAG GGCATCATCGCCTCGCTGCAGGGCGACACGTCGTCGCTGACCACCCTGGTCGGCCAGACTTCCACGCTCACACAGACTTT CGCGGGCCGCGACCAGGCGCTCGGCAACGTGATCACCAACCTGAACAAGGTGGTGGGCAACCTGGCGGCGCAGAACGACA ACCTCGACGGGGTCATCACCCAGACCCGCAGCGTGGTCGGGGAACTCGACCGGCGACGCCCGGACCTGGTGGCCTCGGTG GGGTCGCTGGCCCGGCTGAGCGATCGGCTGTCGGCCTCGGCCGCCGACGTGTACCCGGCGCTGCGTGAGTTCATCGACCG CCAACCGGGCGTCACCAAACACATCATGGACGTCGAACCGCAGGTGGCCTTCTTCGGCGACAACATCCCGCTGCTGTTGA AGGGGCTCACCCGGGTGGGCAACCAGGGCGCCTACGGCAACGCCTACGTGTGCGACGTGAACTTCATGGGATTTTTTCCG GGGCTCAACGACGTCGTGCCGATCATCATCAACGCCGCCACACCCGGCAACCGGGCCTGGCACACCCCGAGATGCAGGAG CACCGTCGATGGTTGA
Upstream 100 bases:
>100_bases AGGCCACCGAGTTGCTGCTGGGCCCGGTCGCCCGCGGAACGACGGTGTCGCTGGCGCATCCGCCCGGGCCGTCGCCCGCG CCTCGACCCGGGGAGGGCAA
Downstream 100 bases:
>100_bases GTTGATGGCCGGGACCACGGCAGGATCGATGCTCGACAGGTCTGTGCGGCAACGGCTTTCGGCACTGACGAAGCGCCCGC TGGAGAGCTACAACAAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family B; MCE Family Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; Mce-Related Protein; Mce Family B; Mce Family C; Mce Family Lipoe; Mce Family Protein Mce5B; MCE-Family; MCE-Family C; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Virulence Factor MCE-Like Protein; Mce-Family C
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGVRVGRVEKIELDGKLAKVSFV VQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTK GIIASLQGDTSSLTTLVGQTSTLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVGNQGAYGNAYVCDVNFMGFFP GLNDVVPIIINAATPGNRAWHTPRCRSTVDG
Sequences:
>Translated_351_residues MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGVRVGRVEKIELDGKLAKVSFV VQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTK GIIASLQGDTSSLTTLVGQTSTLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVGNQGAYGNAYVCDVNFMGFFP GLNDVVPIIINAATPGNRAWHTPRCRSTVDG >Mature_351_residues MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGVRVGRVEKIELDGKLAKVSFV VQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTK GIIASLQGDTSSLTTLVGQTSTLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVGNQGAYGNAYVCDVNFMGFFP GLNDVVPIIINAATPGNRAWHTPRCRSTVDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38015; Mature: 38015
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECE RVGRVEKIELDGKLAKVSFVVQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLP EECCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIASLQGDTSSLTTLVGQT CCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC STLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVG HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHC NQGAYGNAYVCDVNFMGFFPGLNDVVPIIINAATPGNRAWHTPRCRSTVDG CCCCCCCEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECE RVGRVEKIELDGKLAKVSFVVQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLP EECCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIASLQGDTSSLTTLVGQT CCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC STLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVG HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHC NQGAYGNAYVCDVNFMGFFPGLNDVVPIIINAATPGNRAWHTPRCRSTVDG CCCCCCCEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA