| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407951
Identifier: 41407951
GI number: 41407951
Start: 2031572
End: 2032651
Strand: Direct
Name: 41407951
Synonym: MAP1853
Alternate gene names: NA
Gene position: 2031572-2032651 (Clockwise)
Preceding gene: 41407950
Following gene: 41407952
Centisome position: 42.06
GC content: 67.41
Gene sequence:
>1080_bases ATGGCCGGGACCACGGCAGGATCGATGCTCGACAGGTCTGTGCGGCAACGGCTTTCGGCACTGACGAAGCGCCCGCTGGA GAGCTACAACAAGACCTGGCTCGGGTTCGTCGCCGTCGCGGTGGTCGCGGCGGTGATCGCGGTCATGCTGGTGGTGCACG CGCTCGGCGCCGGATACCGGCACTACACGGCCGAGTTTGCGCAAGCGGCGTCGCTGCGCGCCGGCAACCCGATCGTGGTG GCGGGCATCCCGGTGGGCACGGTCACCAGCATGAAGCTCGTCGGCGACCACGTCGAGGCGGGTCTGAAGGTGCGCGACAA CATCAGCTTCGGCAAGGATTCCCGGGCCCAGATCCGGGTCACCACCATCCTGGGTTCGCGCTACCTGGCGCTGGAACCCA ACGGCCCGGCGCGCCTGCCCGGCAACACCTTCGACCTGGCGCACACCGAGGTCCCCTACGACCTGCAGGCCGCATTGCAG GACGCCACCACCACCTTCGAGCAGGTCGACTCCGACCGGTTCGCCCAGTCGCTGGCGGTGTTGGGCAAGCAACTCGAGGG CCTGCCGGCCGTTGTGCCGCAGGCGATCACGAACATCGACACGCTGTCGTCGATCATCGCGACCCGGCGCGATCAACTCG GGCAGCTGCTGCGCAGCACCGAACAGGTGACCAACACGCTGCGCCGCCAGCAGGCCGGCATCGGCGCGCTCGTCGACCAG GGCCAGGACCTGCTGGGCCAATTCGTGGCGCGGCGCGCGGTCTTCCACGCCATGATGCGATCCCTGTCCAGCCTGGTCGA CACCCTCAGTCGGGTGGTGGTCGACGACCGGTCGGGGGTGGACGCGCTGCTCAAAGACATCCGCGATTTCACCGGCCTGG TGTCCGCGCACGACGACCTGCTGCACAGCCTGCTGCAGGTCAGCCCGATCTTCTTCCGCGAGGCGGCCAACCTCACCGGT GACGGCAACGCGATCAATTTCAACGCGCCCAACGTCCCGCTGATCGACTCGTGGATGTGCGCGATCAGCGGCCGTGCCAA GCAGTTCGGCATGATCCAGTACTTCAAGGACTGCAAGTGA
Upstream 100 bases:
>100_bases GGGCTCAACGACGTCGTGCCGATCATCATCAACGCCGCCACACCCGGCAACCGGGCCTGGCACACCCCGAGATGCAGGAG CACCGTCGATGGTTGAGTTG
Downstream 100 bases:
>100_bases CGCGGCTCGGCACGAAGGCGCTGGCCGTGGTGGCCGGCGTGGCTGTGGTCGCCGCCGCCGTCGGCATCGGATGGTGGCTG CTGCGCCCCGACGACGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; MCE-Family C; Secreted Protein; MCE Family Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; Mce Family C; MCE-Family B; Mce-Family C; Mce-Related Protein; Mce Family Protein Mce5C
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAGTTAGSMLDRSVRQRLSALTKRPLESYNKTWLGFVAVAVVAAVIAVMLVVHALGAGYRHYTAEFAQAASLRAGNPIVV AGIPVGTVTSMKLVGDHVEAGLKVRDNISFGKDSRAQIRVTTILGSRYLALEPNGPARLPGNTFDLAHTEVPYDLQAALQ DATTTFEQVDSDRFAQSLAVLGKQLEGLPAVVPQAITNIDTLSSIIATRRDQLGQLLRSTEQVTNTLRRQQAGIGALVDQ GQDLLGQFVARRAVFHAMMRSLSSLVDTLSRVVVDDRSGVDALLKDIRDFTGLVSAHDDLLHSLLQVSPIFFREAANLTG DGNAINFNAPNVPLIDSWMCAISGRAKQFGMIQYFKDCK
Sequences:
>Translated_359_residues MAGTTAGSMLDRSVRQRLSALTKRPLESYNKTWLGFVAVAVVAAVIAVMLVVHALGAGYRHYTAEFAQAASLRAGNPIVV AGIPVGTVTSMKLVGDHVEAGLKVRDNISFGKDSRAQIRVTTILGSRYLALEPNGPARLPGNTFDLAHTEVPYDLQAALQ DATTTFEQVDSDRFAQSLAVLGKQLEGLPAVVPQAITNIDTLSSIIATRRDQLGQLLRSTEQVTNTLRRQQAGIGALVDQ GQDLLGQFVARRAVFHAMMRSLSSLVDTLSRVVVDDRSGVDALLKDIRDFTGLVSAHDDLLHSLLQVSPIFFREAANLTG DGNAINFNAPNVPLIDSWMCAISGRAKQFGMIQYFKDCK >Mature_358_residues AGTTAGSMLDRSVRQRLSALTKRPLESYNKTWLGFVAVAVVAAVIAVMLVVHALGAGYRHYTAEFAQAASLRAGNPIVVA GIPVGTVTSMKLVGDHVEAGLKVRDNISFGKDSRAQIRVTTILGSRYLALEPNGPARLPGNTFDLAHTEVPYDLQAALQD ATTTFEQVDSDRFAQSLAVLGKQLEGLPAVVPQAITNIDTLSSIIATRRDQLGQLLRSTEQVTNTLRRQQAGIGALVDQG QDLLGQFVARRAVFHAMMRSLSSLVDTLSRVVVDDRSGVDALLKDIRDFTGLVSAHDDLLHSLLQVSPIFFREAANLTGD GNAINFNAPNVPLIDSWMCAISGRAKQFGMIQYFKDCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38729; Mature: 38598
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTTAGSMLDRSVRQRLSALTKRPLESYNKTWLGFVAVAVVAAVIAVMLVVHALGAGYR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH HYTAEFAQAASLRAGNPIVVAGIPVGTVTSMKLVGDHVEAGLKVRDNISFGKDSRAQIRV HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEE TTILGSRYLALEPNGPARLPGNTFDLAHTEVPYDLQAALQDATTTFEQVDSDRFAQSLAV EEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGKQLEGLPAVVPQAITNIDTLSSIIATRRDQLGQLLRSTEQVTNTLRRQQAGIGALVDQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC GQDLLGQFVARRAVFHAMMRSLSSLVDTLSRVVVDDRSGVDALLKDIRDFTGLVSAHDDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LHSLLQVSPIFFREAANLTGDGNAINFNAPNVPLIDSWMCAISGRAKQFGMIQYFKDCK HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure AGTTAGSMLDRSVRQRLSALTKRPLESYNKTWLGFVAVAVVAAVIAVMLVVHALGAGYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH HYTAEFAQAASLRAGNPIVVAGIPVGTVTSMKLVGDHVEAGLKVRDNISFGKDSRAQIRV HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEE TTILGSRYLALEPNGPARLPGNTFDLAHTEVPYDLQAALQDATTTFEQVDSDRFAQSLAV EEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGKQLEGLPAVVPQAITNIDTLSSIIATRRDQLGQLLRSTEQVTNTLRRQQAGIGALVDQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC GQDLLGQFVARRAVFHAMMRSLSSLVDTLSRVVVDDRSGVDALLKDIRDFTGLVSAHDDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LHSLLQVSPIFFREAANLTGDGNAINFNAPNVPLIDSWMCAISGRAKQFGMIQYFKDCK HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA