Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41407949

Identifier: 41407949

GI number: 41407949

Start: 2028923

End: 2030515

Strand: Direct

Name: 41407949

Synonym: MAP1851

Alternate gene names: NA

Gene position: 2028923-2030515 (Clockwise)

Preceding gene: 41407948

Following gene: 41407950

Centisome position: 42.01

GC content: 67.67

Gene sequence:

>1593_bases
ATGCCCAATTCCTTTGAGCTGGACGGACGCGGCCCCTCGGACCGGCAGCTGTTCGGCATCGGCATCGCGGTGCTGGTGGT
CAGCGCCCTGCTCACCACCGTGATGTTGGTGAAATCGACTGGCAGGCTGGACGATTACGTGCGGGTGGTGGCCGACCTGG
TCAACGTGGGCGACGGCCTGCCGCAGAAGTCGGACGTCAAATACCACGGCGTGCTGGTCGGCATGGTCGACGACGTCGTC
CCCGCGGCCCACGGCAAGCCCAACTATGTCCACATCAACCTGAAAGAGGACTACGCCAAGTCGATTCCGGCCAGTGTGAC
CGCACGAGTGGTGCCCAGCAACGTGTTCGCCGTGTCGTCGGTGCAACTGGTGGGTAACGGGCCCGGCACGAAAATCCGCG
ACGGCGCCCATATTCCGGAGGACAAGCGGCTGCCCACCGTGTTGTTCCAGACGACGGTCAGCAAGCTGCGCGATCTGCTC
GCCGCCGCGGGGCGCGGCCGCGATGACAGGTCGGTGGGAATTCTGGCCGCCCTGGGGGCGGCTACCGATCATCGGCGGGT
CAGCCTGCTCAACGCCGGGGCGCAACTGAATCGCCTTCTCGATCAACTCAATTCGATTGTCAGCACCGACACCGGCCCGT
CCACGGTGTCGGCCCTGCTGGATGCGACGCGGGGCCTGGCGCAGACGGCGCCGGATCTGTTGGACGCGTTGCACCAGGCC
GTCGAGCCGATGCAGACCTTCGCCGAGACACGCGGCCAGCTGGCGTCGCTGCTGTCGGGCGCCGACTACACGGTGGGGAC
GACGCGTCAGTCCTTCGACAACCACATCGACCAATTGATCAGGATCACCGCAGATTTCACACCGGTGCTCGGTGTGTTGG
CGCAGAAGTCGAACAACTTCGTGCCCGCGGTCACCAAACTGGACAACCTGGCCAACCAGTTCATGGAGCAGGTCTGGAAC
CCGCAGACCAACCTGGGCAACATGCGCGCGATGCTGACCTTCACCCCCAGCTCCACCTACACCCGCGCCGACTGCCCGCA
TTACGGAGAGCTGAAGGGGCCCAGCTGCTTCACCGCACCGCTGATTCCGGTGCGGCCCGACCTGCCCGACGTGCTGCTGC
CACAGAACTATCAGCCGCCCAAGGATCTGGCGCCGCCGCCGGGCACGGTGATCGGCCCGGACGGGAACCTCGTCGCGGTG
GGCCCGCCGCTGATCAACCCCACCCCGAATTTGACCGACCCCAATCCCCCACTGGCCCCGGGGATTACCCCGTCGCCGCC
GGTGCCCGGGAGCGCCAATCCGGACAACCCGTCACCGGGGGCGCCGGCGACACCGCAACCGCAGCAACCGTGGGTCGCGC
CGGTGGCGCCCAAGGCCCCGTGGATTCCCCAGTCCTCGTTCCGGCCGTCGTTCGGCGGCAACGTGGGTCCCGTGGGGAGC
CAATACGAACGAACCATGCTGGGCGCGATCACCGGTGGACCCGCGTCGGAGGCCACCGAGTTGCTGCTGGGCCCGGTCGC
CCGCGGAACGACGGTGTCGCTGGCGCATCCGCCCGGGCCGTCGCCCGCGCCTCGACCCGGGGAGGGCAAATGA

Upstream 100 bases:

>100_bases
CGGTGGTGATCATCGTGAACATGCTGCTCACCATGGCGCTGTGGGGCGTCGATTCCGGCGCAAGGTTCGGCGGGTAGGCC
GGTGGCGAGGTCGGTGGACG

Downstream 100 bases:

>100_bases
GGTTTCGCGGCCCGCTCATCGCGCTGACGCTGTTCATGATCGTCTCGCTGACGCTGACCTGGCTGGTGTATGTGAGCCTG
CGCCGCGACGTGGCCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Virulence Factor Mce Family Protein; Secreted Protein; Mce Related Protein; MCE Family Protein; Mammalian Cell Entry Related Domain-Containing Protein; MCE-Family A; Mce Protein Mce5A; Mce-Related Protein

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MPNSFELDGRGPSDRQLFGIGIAVLVVSALLTTVMLVKSTGRLDDYVRVVADLVNVGDGLPQKSDVKYHGVLVGMVDDVV
PAAHGKPNYVHINLKEDYAKSIPASVTARVVPSNVFAVSSVQLVGNGPGTKIRDGAHIPEDKRLPTVLFQTTVSKLRDLL
AAAGRGRDDRSVGILAALGAATDHRRVSLLNAGAQLNRLLDQLNSIVSTDTGPSTVSALLDATRGLAQTAPDLLDALHQA
VEPMQTFAETRGQLASLLSGADYTVGTTRQSFDNHIDQLIRITADFTPVLGVLAQKSNNFVPAVTKLDNLANQFMEQVWN
PQTNLGNMRAMLTFTPSSTYTRADCPHYGELKGPSCFTAPLIPVRPDLPDVLLPQNYQPPKDLAPPPGTVIGPDGNLVAV
GPPLINPTPNLTDPNPPLAPGITPSPPVPGSANPDNPSPGAPATPQPQQPWVAPVAPKAPWIPQSSFRPSFGGNVGPVGS
QYERTMLGAITGGPASEATELLLGPVARGTTVSLAHPPGPSPAPRPGEGK

Sequences:

>Translated_530_residues
MPNSFELDGRGPSDRQLFGIGIAVLVVSALLTTVMLVKSTGRLDDYVRVVADLVNVGDGLPQKSDVKYHGVLVGMVDDVV
PAAHGKPNYVHINLKEDYAKSIPASVTARVVPSNVFAVSSVQLVGNGPGTKIRDGAHIPEDKRLPTVLFQTTVSKLRDLL
AAAGRGRDDRSVGILAALGAATDHRRVSLLNAGAQLNRLLDQLNSIVSTDTGPSTVSALLDATRGLAQTAPDLLDALHQA
VEPMQTFAETRGQLASLLSGADYTVGTTRQSFDNHIDQLIRITADFTPVLGVLAQKSNNFVPAVTKLDNLANQFMEQVWN
PQTNLGNMRAMLTFTPSSTYTRADCPHYGELKGPSCFTAPLIPVRPDLPDVLLPQNYQPPKDLAPPPGTVIGPDGNLVAV
GPPLINPTPNLTDPNPPLAPGITPSPPVPGSANPDNPSPGAPATPQPQQPWVAPVAPKAPWIPQSSFRPSFGGNVGPVGS
QYERTMLGAITGGPASEATELLLGPVARGTTVSLAHPPGPSPAPRPGEGK
>Mature_529_residues
PNSFELDGRGPSDRQLFGIGIAVLVVSALLTTVMLVKSTGRLDDYVRVVADLVNVGDGLPQKSDVKYHGVLVGMVDDVVP
AAHGKPNYVHINLKEDYAKSIPASVTARVVPSNVFAVSSVQLVGNGPGTKIRDGAHIPEDKRLPTVLFQTTVSKLRDLLA
AAGRGRDDRSVGILAALGAATDHRRVSLLNAGAQLNRLLDQLNSIVSTDTGPSTVSALLDATRGLAQTAPDLLDALHQAV
EPMQTFAETRGQLASLLSGADYTVGTTRQSFDNHIDQLIRITADFTPVLGVLAQKSNNFVPAVTKLDNLANQFMEQVWNP
QTNLGNMRAMLTFTPSSTYTRADCPHYGELKGPSCFTAPLIPVRPDLPDVLLPQNYQPPKDLAPPPGTVIGPDGNLVAVG
PPLINPTPNLTDPNPPLAPGITPSPPVPGSANPDNPSPGAPATPQPQQPWVAPVAPKAPWIPQSSFRPSFGGNVGPVGSQ
YERTMLGAITGGPASEATELLLGPVARGTTVSLAHPPGPSPAPRPGEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55569; Mature: 55438

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSFELDGRGPSDRQLFGIGIAVLVVSALLTTVMLVKSTGRLDDYVRVVADLVNVGDGL
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PQKSDVKYHGVLVGMVDDVVPAAHGKPNYVHINLKEDYAKSIPASVTARVVPSNVFAVSS
CCCCCCEEHEEEEEHHHHHHHCCCCCCCEEEEEECHHHHHHCCCHHEEEECCCCEEEEEE
VQLVGNGPGTKIRDGAHIPEDKRLPTVLFQTTVSKLRDLLAAAGRGRDDRSVGILAALGA
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
ATDHRRVSLLNAGAQLNRLLDQLNSIVSTDTGPSTVSALLDATRGLAQTAPDLLDALHQA
CCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEPMQTFAETRGQLASLLSGADYTVGTTRQSFDNHIDQLIRITADFTPVLGVLAQKSNNF
HHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VPAVTKLDNLANQFMEQVWNPQTNLGNMRAMLTFTPSSTYTRADCPHYGELKGPSCFTAP
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
LIPVRPDLPDVLLPQNYQPPKDLAPPPGTVIGPDGNLVAVGPPLINPTPNLTDPNPPLAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC
GITPSPPVPGSANPDNPSPGAPATPQPQQPWVAPVAPKAPWIPQSSFRPSFGGNVGPVGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QYERTMLGAITGGPASEATELLLGPVARGTTVSLAHPPGPSPAPRPGEGK
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PNSFELDGRGPSDRQLFGIGIAVLVVSALLTTVMLVKSTGRLDDYVRVVADLVNVGDGL
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PQKSDVKYHGVLVGMVDDVVPAAHGKPNYVHINLKEDYAKSIPASVTARVVPSNVFAVSS
CCCCCCEEHEEEEEHHHHHHHCCCCCCCEEEEEECHHHHHHCCCHHEEEECCCCEEEEEE
VQLVGNGPGTKIRDGAHIPEDKRLPTVLFQTTVSKLRDLLAAAGRGRDDRSVGILAALGA
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
ATDHRRVSLLNAGAQLNRLLDQLNSIVSTDTGPSTVSALLDATRGLAQTAPDLLDALHQA
CCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEPMQTFAETRGQLASLLSGADYTVGTTRQSFDNHIDQLIRITADFTPVLGVLAQKSNNF
HHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VPAVTKLDNLANQFMEQVWNPQTNLGNMRAMLTFTPSSTYTRADCPHYGELKGPSCFTAP
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
LIPVRPDLPDVLLPQNYQPPKDLAPPPGTVIGPDGNLVAVGPPLINPTPNLTDPNPPLAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC
GITPSPPVPGSANPDNPSPGAPATPQPQQPWVAPVAPKAPWIPQSSFRPSFGGNVGPVGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QYERTMLGAITGGPASEATELLLGPVARGTTVSLAHPPGPSPAPRPGEGK
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA