Click here to switch to the map view.

The map label for this gene is mmpS5

Identifier: 41407835

GI number: 41407835

Start: 1898826

End: 1899242

Strand: Direct

Name: mmpS5

Synonym: MAP1737

Alternate gene names: 41407835

Gene position: 1898826-1899242 (Clockwise)

Preceding gene: 41407834

Following gene: 41407836

Centisome position: 39.31

GC content: 63.79

Gene sequence:

>417_bases
GTGCGCAACGCCTGGTTGCCGCTGCTGATCGTGGCGGTGGTGCTGGTCGGCGGCTTCGCCGTGGTTCGGGTCAAGTCCTT
CTTCGGCGCCCACGACACCGGCATCCTGACCAGCCCGCGGCTCGACGATTCCAAGCCGTTCAAACCCAAGGTCGTCAAGT
ACGAGGTGTTCGGTTCGGCCAGCCAGGCCAACGTGAACTATCTGGATCTGTCCGCCGACCCCAAGCGCGTCGATGGCGCG
CCGCTGCCGTGGACGCTGGTGCTGTCCACCACCGCCCCGTCGGTCTTCCCCAATCTTTCGGCGCAAAGCGACGGCAACAC
CCTGGGGTGCCGCATCACCATCGATGACGAAGTCAAGGACGAGAACATCACCCATGGCGTACACGCCCTGACCTTCTGCT
TGGTGAAATCCGCATGA

Upstream 100 bases:

>100_bases
CGTGTGGGCACTCGCTTGCCCACGGCCCCGGCGGCACAACCGCTGACCCGCGTCACGACCGCGTGATGGGGAAGGGAACT
AGGTGCAGATTTCGAGACTT

Downstream 100 bases:

>100_bases
GCACAACGTTCGACGACACCAGAACCGACGCCATCCCCGTCGTCAAGGAGCCCGTGCGGGAGAAGATCCCCCGGTTCATC
CGGACGTTCGCCGTGCCGAT

Product: MmpS5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGSASQANVNYLDLSADPKRVDGA
PLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKDENITHGVHALTFCLVKSA

Sequences:

>Translated_138_residues
MRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGSASQANVNYLDLSADPKRVDGA
PLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKDENITHGVHALTFCLVKSA
>Mature_138_residues
MRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGSASQANVNYLDLSADPKRVDGA
PLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKDENITHGVHALTFCLVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 14838; Mature: 14838

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGSA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEEEECCCC
SQANVNYLDLSADPKRVDGAPLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKD
CCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
ENITHGVHALTFCLVKSA
CCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGILTSPRLDDSKPFKPKVVKYEVFGSA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEEEECCCC
SQANVNYLDLSADPKRVDGAPLPWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKD
CCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
ENITHGVHALTFCLVKSA
CCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]