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The map label for this gene is 41407834

Identifier: 41407834

GI number: 41407834

Start: 1897902

End: 1898510

Strand: Direct

Name: 41407834

Synonym: MAP1736

Alternate gene names: NA

Gene position: 1897902-1898510 (Clockwise)

Preceding gene: 41407833

Following gene: 41407835

Centisome position: 39.3

GC content: 66.17

Gene sequence:

>609_bases
ATGGCCAATCCCGTTGGGCTACGCGAGCGCCGTCGCCGCCAGACGAGCGCCGACATCCGCGATGCCGCGGTGCGCCTCAC
CCTGGAACGCGGATTCGACAAGGTCACCGTGGACGAGATCTGCGCCGAAGCGGGAATCTCGACGCGCACGTTCTTCAACT
ACTTCCCCAACAAGGAATCCGCGATCGCCTACGGCCCATCGGACATACCGCCGGAGTTGGTCGCCGACTTCGTCGCGGCC
GGACCGGCCCCGTACTCGGTGGTGCTGGCGGAGCTGATCACGCTGGCGGCGCACCACCTGCGTGACGTGCCCCCACGACG
GGAACACGCCGCCAACATGCTGGAACTCGCCAAGACCTCCCCCGCGGTGTTGGCCGCGTTCCTCGCCGATCTGGAACGAT
TCCAGAACCAGTTGACCGACATCATCGTGCGCCGCCAAGGCATGCAGCCCGACGACGAGATGGCCCCGCTGATCTCCGCG
CTGGCCCTGACGGCGGTGCGTTCCGGAATCGAGAAGTGGGCGAGCGGCGAGGCGAGTGAAACCGACGACACGCCAATGCC
TTATGTTGAGCGGGCCGCGGCGCTGGTGAACAGCATCTTCACCAAGTGA

Upstream 100 bases:

>100_bases
GCCGCGCCATGTTTGCCGGCGCGGCGGACGGGGCGGTCCGCCCGGCCCCGAGCCGACGGCTTTTGAGTGCAAAGTGTGCA
CGACGTGCAACTATATGAGT

Downstream 100 bases:

>100_bases
CCTGAAACACCTCCAGCAAATGTTGCATAAACTGCAAGGTATACAGATCATGTACTATGCGCTGGTGGCGGTACGCGGGG
AGGCTTCAGCAACAAGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator TcmR; Transcriptional Regulatory Protein; TetR Family Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MANPVGLRERRRRQTSADIRDAAVRLTLERGFDKVTVDEICAEAGISTRTFFNYFPNKESAIAYGPSDIPPELVADFVAA
GPAPYSVVLAELITLAAHHLRDVPPRREHAANMLELAKTSPAVLAAFLADLERFQNQLTDIIVRRQGMQPDDEMAPLISA
LALTAVRSGIEKWASGEASETDDTPMPYVERAAALVNSIFTK

Sequences:

>Translated_202_residues
MANPVGLRERRRRQTSADIRDAAVRLTLERGFDKVTVDEICAEAGISTRTFFNYFPNKESAIAYGPSDIPPELVADFVAA
GPAPYSVVLAELITLAAHHLRDVPPRREHAANMLELAKTSPAVLAAFLADLERFQNQLTDIIVRRQGMQPDDEMAPLISA
LALTAVRSGIEKWASGEASETDDTPMPYVERAAALVNSIFTK
>Mature_201_residues
ANPVGLRERRRRQTSADIRDAAVRLTLERGFDKVTVDEICAEAGISTRTFFNYFPNKESAIAYGPSDIPPELVADFVAAG
PAPYSVVLAELITLAAHHLRDVPPRREHAANMLELAKTSPAVLAAFLADLERFQNQLTDIIVRRQGMQPDDEMAPLISAL
ALTAVRSGIEKWASGEASETDDTPMPYVERAAALVNSIFTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22119; Mature: 21988

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPVGLRERRRRQTSADIRDAAVRLTLERGFDKVTVDEICAEAGISTRTFFNYFPNKES
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHCCCCCC
AIAYGPSDIPPELVADFVAAGPAPYSVVLAELITLAAHHLRDVPPRREHAANMLELAKTS
EEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PAVLAAFLADLERFQNQLTDIIVRRQGMQPDDEMAPLISALALTAVRSGIEKWASGEASE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDDTPMPYVERAAALVNSIFTK
CCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANPVGLRERRRRQTSADIRDAAVRLTLERGFDKVTVDEICAEAGISTRTFFNYFPNKES
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHCCCCCC
AIAYGPSDIPPELVADFVAAGPAPYSVVLAELITLAAHHLRDVPPRREHAANMLELAKTS
EEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PAVLAAFLADLERFQNQLTDIIVRRQGMQPDDEMAPLISALALTAVRSGIEKWASGEASE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDDTPMPYVERAAALVNSIFTK
CCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA