| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mmpL5
Identifier: 41407836
GI number: 41407836
Start: 1899239
End: 1902139
Strand: Direct
Name: mmpL5
Synonym: MAP1738
Alternate gene names: 41407836
Gene position: 1899239-1902139 (Clockwise)
Preceding gene: 41407835
Following gene: 41407842
Centisome position: 39.32
GC content: 62.08
Gene sequence:
>2901_bases ATGAGCACAACGTTCGACGACACCAGAACCGACGCCATCCCCGTCGTCAAGGAGCCCGTGCGGGAGAAGATCCCCCGGTT CATCCGGACGTTCGCCGTGCCGATCATCATCGGCTGGATCGCGCTCATCGCGGTGCTCAACGTCGTCGTCCCGCAGCTCG ACGAGGTCGGCAAGATGCGCTCGGTGGAGATGACTCCCGACGACGCGCAGTCGGTCGTTGCGACCAAGCGCATGGGCGCG GTGTTCAACGAGTACAAGTCCAACAGCTCGGTGATGATCGTGCTCGAGGGCCAACAACCCCTGGGCGCCGACGCCCACGC CTACTACGACGAGATCGTGCGCCGGCTCAATGCGGACACCAAACACGTTGAGCACGTTCAGGATATGTGGAGCGATCCGC TGACCGGGGCGGGGGCGCAGAGCAACGACGGGAAGGCGTCCTACGTCCAGGTCTATCTGGCCGGTAACCAGGGTGAGGCG CTGGCCAACGAGTCGGTGGAATCGGTCCAGAACATCGTCAAGAGCGTGCAGGCACCCAACGGGGTCAAGGCGTATGTCAC CGGCCCGGCCGCGCTGTCGGCGGATCAGCACACCGCCGGTGACCGGAGCCTGCAGCTGATCACGGCGGCCACCTTCACGG TCATCATCGGGATGCTGCTGCTGGTCTACCGGTCGGTCATCACGGTGTTGCTGACGCTGGTGATGGTGGTGCTCGAGCTG TCCGCCGCCCGCGGGATGGTCGCATTCCTGGGTTATTACAAGATCATTGGCCTGTCGACGTTCGCCACCAACCTGTTGGT CACGTTGGCGATCGCGGCCGCCACCGACTACGCGATCTTTTTGATCGGCCGCTATCAGGAAGCCCGGGCGGTCGGCGAGT CCCGCGAAGACGCGTACTACACCATGTACAAGGGCACCGCGCATGTGGTGGCCGGCTCGGGGATGACCATCGCCGGCGCC ACGTTCTGCCTGCATTTCACCAACCTGCCCTACTTCCAGACGCTGGGCATCCCGCTGGCCATCGGCATGGTGGTGGTGGT CGCGGCGGCGTTGACGCTGGGCCCCGCGGTCATCTCGGTGGCCTCGCGTTTCCGTCAGACGCTGGAACCCAGGCGCACGC AACGGATTCGGGGATGGCGCAAGGTCGGCACCGTCGTCGTGCGCTGGCCCGGCCCGATCCTGGTCCTCACGATCGGGGTG GCACTCGTCGGGTTGCTGACCCTGCCCGGATACCGCACCAACTACAACGACCGCAACTACCTGCCCACCGACCTGCCCGC CAACGAGGGGTACGCGGCCGCCGACCGGCACTTCTCGCAGGCGCGGATGAACCCCGAAGTGCTGATGATCGAAAGCGACC ACGATCTGCGCAACTCGGCGGACTTTTTGGTGATCGACAAGATCGCCAAAACGGTCTTCCGGGTACCCGGGATCGGGCGG GTGCAGGCCATCACCCGGCCGCAGGGCACCCCGATCGAGCACACCTCGATCCCCTTCCAGATCAGCATGCAGGGCGTCAC CCAGCAGATGAACCAGAAGTACCAGCAAGACCAGATGGCCGACATGCTGCATCAGGCCGACATGATGCAGACCACCATCG ACAGCATGGAAAAGATGCAAAGCATCACCGTGCAGATGTCGAACGACATGCATGTGATGGTGCAAAAGATGCATGACATG ACCATCGACATCAACGACTTACGCAACAAAATGGCCGATTTCGAGGACTTCTTCCGGCCCATGCGCAGCTACTTCTACTG GGAAAAGCACTGCTACGACATCCCGGTGTGCTGGTCGCTGCGCTCGGTGTTCGACGCGCTCGACGGTATCGACACCATGA CCGACGACATCCAAAGCCTGCTGCCCATCATGGATCATCTGGACACGCTGATGCCCCAGATGGTGGCGTTGATGCCCTCG ATGATCGAGAACATGAAGGCCATGAAAACCACGATGCTGACCATGTATTCGACCCAGAAGGGTCTACAGGATCAGCAGAA CGAGGCGCAGAAGAACTCCAACGCCATGGGCAAGGCATTCGACGCCTCCAAAAACGACGACTCGTTCTACCTGCCCCCGG AGACCTTCAACAACAAAGAGTTCAAGAAGGGGATGAAGAACTTCATCTCCCCCGACGGGCACGCCGTGCGGTTCATCATC AGCCATGACGGCGATCCGATGACCCAGGAAGGCATTTCACACATCGGGGCGATCAAGAAAGCCGCCTACGAAGCGCTCAA GGGAACACCACTGGAGGGCTCCAAGATCTACCTGGCGGGCACCGCGTCGATCTACAAGGACCTCAGCGACGGCAACAACT ACGACCTGTTGATCGCCGGAATCTCTTCGCTGTGCCTGATTTTCATCATCATGCTGATCATCACCCGCGGCGTGGTGGCT TCGGCGGTCATCGTGGGCACCGTATTGCTCTCACTGGGTGCATCATTCGGGCTGTCGGTGCTGATCTGGCAGCACCTCAT CGGCATCGAACTGCACTGGATGGTGCTGGCCATGTCGGTCATCATCCTGCTGGCCGTCGGCGCCGACTACAACCTGCTGC TGGTGGCCAGGTTCAAAGAAGAAATCCACGCCGGCTTGAACACCGGCATCATCCGGTCGATGGGCGGCACCGGCTCGGTG GTGACCTCGGCCGGGCTGGTGTTCGCCTTCACCATGATGACAATGGCGGTCAGCGAACTCACGGTGATCGGACAGGTCGG TACCACCATCGGCCTGGGCCTGCTGTTCGACACCCTGATCGTGCGGTCACTGATGACCCCCTCGATCGCCGCCCTGCTGG GCAAATGGTTCTGGTGGCCCCAACGAGTCCGCCAACGTCCCGTCCCCTCCCCTTGGCCGAAGCCGGCCGCCCAAGAGCGC GAGGTGCTTGCGGACGCCTGA
Upstream 100 bases:
>100_bases GCAACACCCTGGGGTGCCGCATCACCATCGATGACGAAGTCAAGGACGAGAACATCACCCATGGCGTACACGCCCTGACC TTCTGCTTGGTGAAATCCGC
Downstream 100 bases:
>100_bases ACCACGCGAAAGTGCAACTGCCGACGGTCCCACTCGGGAAATGCGTCGGCAGTAGCACTTTCGCGGCAAAGGGCTAGGTG ACCCAATCCGGCTGAGCGTC
Product: MmpL5
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 966; Mature: 965
Protein sequence:
>966_residues MSTTFDDTRTDAIPVVKEPVREKIPRFIRTFAVPIIIGWIALIAVLNVVVPQLDEVGKMRSVEMTPDDAQSVVATKRMGA VFNEYKSNSSVMIVLEGQQPLGADAHAYYDEIVRRLNADTKHVEHVQDMWSDPLTGAGAQSNDGKASYVQVYLAGNQGEA LANESVESVQNIVKSVQAPNGVKAYVTGPAALSADQHTAGDRSLQLITAATFTVIIGMLLLVYRSVITVLLTLVMVVLEL SAARGMVAFLGYYKIIGLSTFATNLLVTLAIAAATDYAIFLIGRYQEARAVGESREDAYYTMYKGTAHVVAGSGMTIAGA TFCLHFTNLPYFQTLGIPLAIGMVVVVAAALTLGPAVISVASRFRQTLEPRRTQRIRGWRKVGTVVVRWPGPILVLTIGV ALVGLLTLPGYRTNYNDRNYLPTDLPANEGYAAADRHFSQARMNPEVLMIESDHDLRNSADFLVIDKIAKTVFRVPGIGR VQAITRPQGTPIEHTSIPFQISMQGVTQQMNQKYQQDQMADMLHQADMMQTTIDSMEKMQSITVQMSNDMHVMVQKMHDM TIDINDLRNKMADFEDFFRPMRSYFYWEKHCYDIPVCWSLRSVFDALDGIDTMTDDIQSLLPIMDHLDTLMPQMVALMPS MIENMKAMKTTMLTMYSTQKGLQDQQNEAQKNSNAMGKAFDASKNDDSFYLPPETFNNKEFKKGMKNFISPDGHAVRFII SHDGDPMTQEGISHIGAIKKAAYEALKGTPLEGSKIYLAGTASIYKDLSDGNNYDLLIAGISSLCLIFIIMLIITRGVVA SAVIVGTVLLSLGASFGLSVLIWQHLIGIELHWMVLAMSVIILLAVGADYNLLLVARFKEEIHAGLNTGIIRSMGGTGSV VTSAGLVFAFTMMTMAVSELTVIGQVGTTIGLGLLFDTLIVRSLMTPSIAALLGKWFWWPQRVRQRPVPSPWPKPAAQER EVLADA
Sequences:
>Translated_966_residues MSTTFDDTRTDAIPVVKEPVREKIPRFIRTFAVPIIIGWIALIAVLNVVVPQLDEVGKMRSVEMTPDDAQSVVATKRMGA VFNEYKSNSSVMIVLEGQQPLGADAHAYYDEIVRRLNADTKHVEHVQDMWSDPLTGAGAQSNDGKASYVQVYLAGNQGEA LANESVESVQNIVKSVQAPNGVKAYVTGPAALSADQHTAGDRSLQLITAATFTVIIGMLLLVYRSVITVLLTLVMVVLEL SAARGMVAFLGYYKIIGLSTFATNLLVTLAIAAATDYAIFLIGRYQEARAVGESREDAYYTMYKGTAHVVAGSGMTIAGA TFCLHFTNLPYFQTLGIPLAIGMVVVVAAALTLGPAVISVASRFRQTLEPRRTQRIRGWRKVGTVVVRWPGPILVLTIGV ALVGLLTLPGYRTNYNDRNYLPTDLPANEGYAAADRHFSQARMNPEVLMIESDHDLRNSADFLVIDKIAKTVFRVPGIGR VQAITRPQGTPIEHTSIPFQISMQGVTQQMNQKYQQDQMADMLHQADMMQTTIDSMEKMQSITVQMSNDMHVMVQKMHDM TIDINDLRNKMADFEDFFRPMRSYFYWEKHCYDIPVCWSLRSVFDALDGIDTMTDDIQSLLPIMDHLDTLMPQMVALMPS MIENMKAMKTTMLTMYSTQKGLQDQQNEAQKNSNAMGKAFDASKNDDSFYLPPETFNNKEFKKGMKNFISPDGHAVRFII SHDGDPMTQEGISHIGAIKKAAYEALKGTPLEGSKIYLAGTASIYKDLSDGNNYDLLIAGISSLCLIFIIMLIITRGVVA SAVIVGTVLLSLGASFGLSVLIWQHLIGIELHWMVLAMSVIILLAVGADYNLLLVARFKEEIHAGLNTGIIRSMGGTGSV VTSAGLVFAFTMMTMAVSELTVIGQVGTTIGLGLLFDTLIVRSLMTPSIAALLGKWFWWPQRVRQRPVPSPWPKPAAQER EVLADA >Mature_965_residues STTFDDTRTDAIPVVKEPVREKIPRFIRTFAVPIIIGWIALIAVLNVVVPQLDEVGKMRSVEMTPDDAQSVVATKRMGAV FNEYKSNSSVMIVLEGQQPLGADAHAYYDEIVRRLNADTKHVEHVQDMWSDPLTGAGAQSNDGKASYVQVYLAGNQGEAL ANESVESVQNIVKSVQAPNGVKAYVTGPAALSADQHTAGDRSLQLITAATFTVIIGMLLLVYRSVITVLLTLVMVVLELS AARGMVAFLGYYKIIGLSTFATNLLVTLAIAAATDYAIFLIGRYQEARAVGESREDAYYTMYKGTAHVVAGSGMTIAGAT FCLHFTNLPYFQTLGIPLAIGMVVVVAAALTLGPAVISVASRFRQTLEPRRTQRIRGWRKVGTVVVRWPGPILVLTIGVA LVGLLTLPGYRTNYNDRNYLPTDLPANEGYAAADRHFSQARMNPEVLMIESDHDLRNSADFLVIDKIAKTVFRVPGIGRV QAITRPQGTPIEHTSIPFQISMQGVTQQMNQKYQQDQMADMLHQADMMQTTIDSMEKMQSITVQMSNDMHVMVQKMHDMT IDINDLRNKMADFEDFFRPMRSYFYWEKHCYDIPVCWSLRSVFDALDGIDTMTDDIQSLLPIMDHLDTLMPQMVALMPSM IENMKAMKTTMLTMYSTQKGLQDQQNEAQKNSNAMGKAFDASKNDDSFYLPPETFNNKEFKKGMKNFISPDGHAVRFIIS HDGDPMTQEGISHIGAIKKAAYEALKGTPLEGSKIYLAGTASIYKDLSDGNNYDLLIAGISSLCLIFIIMLIITRGVVAS AVIVGTVLLSLGASFGLSVLIWQHLIGIELHWMVLAMSVIILLAVGADYNLLLVARFKEEIHAGLNTGIIRSMGGTGSVV TSAGLVFAFTMMTMAVSELTVIGQVGTTIGLGLLFDTLIVRSLMTPSIAALLGKWFWWPQRVRQRPVPSPWPKPAAQERE VLADA
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 106263; Mature: 106132
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTFDDTRTDAIPVVKEPVREKIPRFIRTFAVPIIIGWIALIAVLNVVVPQLDEVGKMR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SVEMTPDDAQSVVATKRMGAVFNEYKSNSSVMIVLEGQQPLGADAHAYYDEIVRRLNADT EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCH KHVEHVQDMWSDPLTGAGAQSNDGKASYVQVYLAGNQGEALANESVESVQNIVKSVQAPN HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GVKAYVTGPAALSADQHTAGDRSLQLITAATFTVIIGMLLLVYRSVITVLLTLVMVVLEL CCEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAARGMVAFLGYYKIIGLSTFATNLLVTLAIAAATDYAIFLIGRYQEARAVGESREDAYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHCCCCCCCEE TMYKGTAHVVAGSGMTIAGATFCLHFTNLPYFQTLGIPLAIGMVVVVAAALTLGPAVISV EEECCCEEEEECCCCEEHHHHHEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ASRFRQTLEPRRTQRIRGWRKVGTVVVRWPGPILVLTIGVALVGLLTLPGYRTNYNDRNY HHHHHHHHCHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC LPTDLPANEGYAAADRHFSQARMNPEVLMIESDHDLRNSADFLVIDKIAKTVFRVPGIGR CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCC VQAITRPQGTPIEHTSIPFQISMQGVTQQMNQKYQQDQMADMLHQADMMQTTIDSMEKMQ EEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SITVQMSNDMHVMVQKMHDMTIDINDLRNKMADFEDFFRPMRSYFYWEKHCYDIPVCWSL HHHHEECCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RSVFDALDGIDTMTDDIQSLLPIMDHLDTLMPQMVALMPSMIENMKAMKTTMLTMYSTQK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLQDQQNEAQKNSNAMGKAFDASKNDDSFYLPPETFNNKEFKKGMKNFISPDGHAVRFII CCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEE SHDGDPMTQEGISHIGAIKKAAYEALKGTPLEGSKIYLAGTASIYKDLSDGNNYDLLIAG ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCCCCEEEHHH ISSLCLIFIIMLIITRGVVASAVIVGTVLLSLGASFGLSVLIWQHLIGIELHWMVLAMSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLAVGADYNLLLVARFKEEIHAGLNTGIIRSMGGTGSVVTSAGLVFAFTMMTMAVSEL HHHHHCCCCCCEEEHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TVIGQVGTTIGLGLLFDTLIVRSLMTPSIAALLGKWFWWPQRVRQRPVPSPWPKPAAQER HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHH EVLADA HHHCCC >Mature Secondary Structure STTFDDTRTDAIPVVKEPVREKIPRFIRTFAVPIIIGWIALIAVLNVVVPQLDEVGKMR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SVEMTPDDAQSVVATKRMGAVFNEYKSNSSVMIVLEGQQPLGADAHAYYDEIVRRLNADT EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCH KHVEHVQDMWSDPLTGAGAQSNDGKASYVQVYLAGNQGEALANESVESVQNIVKSVQAPN HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC GVKAYVTGPAALSADQHTAGDRSLQLITAATFTVIIGMLLLVYRSVITVLLTLVMVVLEL CCEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAARGMVAFLGYYKIIGLSTFATNLLVTLAIAAATDYAIFLIGRYQEARAVGESREDAYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHCCCCCCCEE TMYKGTAHVVAGSGMTIAGATFCLHFTNLPYFQTLGIPLAIGMVVVVAAALTLGPAVISV EEECCCEEEEECCCCEEHHHHHEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ASRFRQTLEPRRTQRIRGWRKVGTVVVRWPGPILVLTIGVALVGLLTLPGYRTNYNDRNY HHHHHHHHCHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC LPTDLPANEGYAAADRHFSQARMNPEVLMIESDHDLRNSADFLVIDKIAKTVFRVPGIGR CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHCCCCCC VQAITRPQGTPIEHTSIPFQISMQGVTQQMNQKYQQDQMADMLHQADMMQTTIDSMEKMQ EEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SITVQMSNDMHVMVQKMHDMTIDINDLRNKMADFEDFFRPMRSYFYWEKHCYDIPVCWSL HHHHEECCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RSVFDALDGIDTMTDDIQSLLPIMDHLDTLMPQMVALMPSMIENMKAMKTTMLTMYSTQK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLQDQQNEAQKNSNAMGKAFDASKNDDSFYLPPETFNNKEFKKGMKNFISPDGHAVRFII CCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEE SHDGDPMTQEGISHIGAIKKAAYEALKGTPLEGSKIYLAGTASIYKDLSDGNNYDLLIAG ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCCCCEEEHHH ISSLCLIFIIMLIITRGVVASAVIVGTVLLSLGASFGLSVLIWQHLIGIELHWMVLAMSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLAVGADYNLLLVARFKEEIHAGLNTGIIRSMGGTGSVVTSAGLVFAFTMMTMAVSEL HHHHHCCCCCCEEEHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TVIGQVGTTIGLGLLFDTLIVRSLMTPSIAALLGKWFWWPQRVRQRPVPSPWPKPAAQER HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHH EVLADA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]