| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407806
Identifier: 41407806
GI number: 41407806
Start: 1866017
End: 1866670
Strand: Direct
Name: 41407806
Synonym: MAP1708
Alternate gene names: NA
Gene position: 1866017-1866670 (Clockwise)
Preceding gene: 41407805
Following gene: 41407808
Centisome position: 38.64
GC content: 64.98
Gene sequence:
>654_bases ATGACCACCACGTCGTCCATCGAAACCATCGCCGACATCGCCATACCCGACACCGCATTGGTTCGCGAGATCACCGAGTT CATCCGGGATGCCGAGGACGACCTGCTTTTCCACCATTCCCGACGGGTATTCCTCTTCGGCGCGCTGCAGGGCCGGCGCC GGGGACTGCAACCGGACCTGGAACTGCTGTACGCGGGCGCCATGTTTCACGACCTGGGCCTGACCGAGCGCTACCGCGAT TCCGCCCTGCGCATCGAGGTCGACGGTGCCAATGCGGCGCGGGAGTTCCTGCTGCACCGCGGCGTCAGCAAGGCAGACGC CGACAAGGTATGGCTGGGCATCGCCTTGCACACCACCCCGGGGGTGCCCGAATTCCTGGATCCCGAAATCGCCTTGGTGA CCGCCGGTGTCGAGACCGATGTGGTGGGCGTTGGCCGCGACGACCTTGCTCCCGAAGCGCTCGCCGCGGTGATCGCCACC CATCCGCGCCCGGATTTCAAAACGCGCATTCTGCAGGCCTTCAACGACGGGATGAAGCACCGCCCGCACAGCACGTTCGG CACGATGAACGCCGATGTGCTCGAGCACTTCGACCCGACGTTCGCCCGGGACAACCTCGTCGATCTGATCCTCAACAACG GCTGGCCCGAATAG
Upstream 100 bases:
>100_bases CTACATCACCGGTCAAATCCTGCGCGTCGACGGGGGCGGAAGTATCGCCGCGTAATGCCAAGGCGGCCAACACAGTACAG CTCAACCGAGGAGACATATC
Downstream 100 bases:
>100_bases CATCGCGCCGCAAGGTCGCCGCTTCAGTCCGATGCGGCTGAATGTCCTGCGGATCGCTTGCCTTGCTCGGTGTACATCGC GTCGATCTGGGCGGCGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; Cyanamide Hydratase; HD Domain-Containing Protein; HD Domain-Containing; Sensory Box HD Domain-Containing Protein
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDLELLYAGAMFHDLGLTERYRD SALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTPGVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIAT HPRPDFKTRILQAFNDGMKHRPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE
Sequences:
>Translated_217_residues MTTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDLELLYAGAMFHDLGLTERYRD SALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTPGVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIAT HPRPDFKTRILQAFNDGMKHRPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE >Mature_216_residues TTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDLELLYAGAMFHDLGLTERYRDS ALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTPGVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIATH PRPDFKTRILQAFNDGMKHRPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24048; Mature: 23917
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDL CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECHHHCCCCCCCH ELLYAGAMFHDLGLTERYRDSALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTP HHHHHHHHHHHCCCCHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCC GVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIATHPRPDFKTRILQAFNDGMKH CCCCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC RPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDL CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECHHHCCCCCCCH ELLYAGAMFHDLGLTERYRDSALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTP HHHHHHHHHHHCCCCHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCC GVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIATHPRPDFKTRILQAFNDGMKH CCCCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC RPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA