Click here to switch to the map view.

The map label for this gene is rutD [H]

Identifier: 41407808

GI number: 41407808

Start: 1868659

End: 1869543

Strand: Direct

Name: rutD [H]

Synonym: MAP1710

Alternate gene names: 41407808

Gene position: 1868659-1869543 (Clockwise)

Preceding gene: 41407806

Following gene: 41407810

Centisome position: 38.69

GC content: 67.34

Gene sequence:

>885_bases
TTGTTTCGGGAGCCGCGGGTAGCCTACGACGCGACGACGGTGGCGACGCACGACGGCGCGCAGCTGCATGTGCGCAGTTA
CGGTTCGGCGTTCGGCCAGCCGATCGTGCTGATCCATGGTTTCGGATGCCGCATCGAGTACTGGAACCCGCAGATCAACG
CTCTTGCCGCCAAGTATCGGGTGATCGCCTACGACCAGCGCGGGCTGGGCCGCAGCACGCTGGGCTCTGACGGCGTGCGC
CCCGACGTGCTGGGGCGCGACCTTGCCGCCGTGCTCGACGCGGTGTTGGCACCGGGGGAACGGGCGGTGTTGGTGGGACA
CAGTTTTGGTGGGATCACCATCATGGCGTGGGCGCAGCGCTTCGCCGCCCACGCGGTGTCGGCGGTGCTGTTGGCCAACA
CCATCGCCGAGCGCTTCAGCGCCACCACGATGCTGCTGCCATTCGCCGACCGCTATCGCCACATCCGCCGACCGTTGATC
ACCGCGTTAGCGGGCTCGACGATGACGCTTCCCTCGATCCGCTGGTCACGGTGGCCGCTGCAGCGGATGGCATTGTCCCG
CTACGCCGATCGGCAGGCGGTGGACTTCGTCTATGAGATCCTGGCCGATTGCCGCACCGATGTGCGGGCGGTGTGGGGAG
CGGGGCTGTCCGGGTTGGACGTCACCGCCGGGTTGGAGAAACTCACGGTGCCGACCACCGTGGTGACCGGCACCGAGGAT
CGGCTGACGCCGCCGGCAGTTGCACACCGGATCGCCGAGACACTACAGGGCCGAGGCAGTCTGCACCGGTTCGCGCGGTT
TCCCCGCGCCGGGCACTGCACGAATATCGAAGTGCCATACGCGTTTAACGCCGAGATCGAACAGTTGGCGGACGCGACCC
GCTGA

Upstream 100 bases:

>100_bases
TATTGTCACGTAGCGATCGCGCAGACGCAAGGTGGGAACCATGGGGAGTGGCCGGCGGGGGCTAGGGCCGCGTTTCGACC
CCGAAAGCCGCGCTGAGGGC

Downstream 100 bases:

>100_bases
TAACCGGCGCCGGGGCCACGTTAGTTTTCGACGGTGATGCGCAGCCGGGGCTTGCGGGCGTCAGTCGGCTTGGCGACGCG
GTCCCACACCGCGTCGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MFREPRVAYDATTVATHDGAQLHVRSYGSAFGQPIVLIHGFGCRIEYWNPQINALAAKYRVIAYDQRGLGRSTLGSDGVR
PDVLGRDLAAVLDAVLAPGERAVLVGHSFGGITIMAWAQRFAAHAVSAVLLANTIAERFSATTMLLPFADRYRHIRRPLI
TALAGSTMTLPSIRWSRWPLQRMALSRYADRQAVDFVYEILADCRTDVRAVWGAGLSGLDVTAGLEKLTVPTTVVTGTED
RLTPPAVAHRIAETLQGRGSLHRFARFPRAGHCTNIEVPYAFNAEIEQLADATR

Sequences:

>Translated_294_residues
MFREPRVAYDATTVATHDGAQLHVRSYGSAFGQPIVLIHGFGCRIEYWNPQINALAAKYRVIAYDQRGLGRSTLGSDGVR
PDVLGRDLAAVLDAVLAPGERAVLVGHSFGGITIMAWAQRFAAHAVSAVLLANTIAERFSATTMLLPFADRYRHIRRPLI
TALAGSTMTLPSIRWSRWPLQRMALSRYADRQAVDFVYEILADCRTDVRAVWGAGLSGLDVTAGLEKLTVPTTVVTGTED
RLTPPAVAHRIAETLQGRGSLHRFARFPRAGHCTNIEVPYAFNAEIEQLADATR
>Mature_294_residues
MFREPRVAYDATTVATHDGAQLHVRSYGSAFGQPIVLIHGFGCRIEYWNPQINALAAKYRVIAYDQRGLGRSTLGSDGVR
PDVLGRDLAAVLDAVLAPGERAVLVGHSFGGITIMAWAQRFAAHAVSAVLLANTIAERFSATTMLLPFADRYRHIRRPLI
TALAGSTMTLPSIRWSRWPLQRMALSRYADRQAVDFVYEILADCRTDVRAVWGAGLSGLDVTAGLEKLTVPTTVVTGTED
RLTPPAVAHRIAETLQGRGSLHRFARFPRAGHCTNIEVPYAFNAEIEQLADATR

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32208; Mature: 32208

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFREPRVAYDATTVATHDGAQLHVRSYGSAFGQPIVLIHGFGCRIEYWNPQINALAAKYR
CCCCCCCEECCEEEEECCCCEEEEEHHHHHHCCCEEEEECCCEEEEEECCCHHHHHHHEE
VIAYDQRGLGRSTLGSDGVRPDVLGRDLAAVLDAVLAPGERAVLVGHSFGGITIMAWAQR
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
FAAHAVSAVLLANTIAERFSATTMLLPFADRYRHIRRPLITALAGSTMTLPSIRWSRWPL
HHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHH
QRMALSRYADRQAVDFVYEILADCRTDVRAVWGAGLSGLDVTAGLEKLTVPTTVVTGTED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHCCCEEEEECCCC
RLTPPAVAHRIAETLQGRGSLHRFARFPRAGHCTNIEVPYAFNAEIEQLADATR
CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEECCEECCCHHHHHHCCCC
>Mature Secondary Structure
MFREPRVAYDATTVATHDGAQLHVRSYGSAFGQPIVLIHGFGCRIEYWNPQINALAAKYR
CCCCCCCEECCEEEEECCCCEEEEEHHHHHHCCCEEEEECCCEEEEEECCCHHHHHHHEE
VIAYDQRGLGRSTLGSDGVRPDVLGRDLAAVLDAVLAPGERAVLVGHSFGGITIMAWAQR
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
FAAHAVSAVLLANTIAERFSATTMLLPFADRYRHIRRPLITALAGSTMTLPSIRWSRWPL
HHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHH
QRMALSRYADRQAVDFVYEILADCRTDVRAVWGAGLSGLDVTAGLEKLTVPTTVVTGTED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHCCCEEEEECCCC
RLTPPAVAHRIAETLQGRGSLHRFARFPRAGHCTNIEVPYAFNAEIEQLADATR
CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEECCEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA