Click here to switch to the map view.

The map label for this gene is 41407804

Identifier: 41407804

GI number: 41407804

Start: 1864642

End: 1865079

Strand: Direct

Name: 41407804

Synonym: MAP1706

Alternate gene names: NA

Gene position: 1864642-1865079 (Clockwise)

Preceding gene: 41407797

Following gene: 41407805

Centisome position: 38.61

GC content: 63.47

Gene sequence:

>438_bases
ATGGCTGGACTGGACAATCACCTGAAGCGCTGCCGCACAGCGCTTCACGGAGCCGTGTCGGCGGTGATCGTTGCCGTGGT
TGCGGTCCTCGGCCTCGCCATCGCCCCGGTGGCCGATGCGGCCGCACCCATGGCGACGTTGACGGTCGAGCATACGTGGC
AGACCGGTTTCATCGCCCGCTTCGCCATCACCAACTCGAGCACGGTGCCACTGTCCGATTGGAAGCTCGAATTCGACATG
CCGGCCGGCCAATCCGTCCTGCACACGTGGAACAGCACCCTCACCCAATCCGGCACGCATTACGTTCTGACGCCGGCGAA
CTGGAATCGGGTCATCGCACCGGGTGGTTCGGCGACGGGTGGTTTCCGAGGAGTGTTGACCGGCACCTATTCGCCACCGA
CGAATTGCGTGCTCAACGGTCAATACCGTTGCACCTGA

Upstream 100 bases:

>100_bases
CGCGGCCGAAATTTCATGCCGGTCTCGGTTGGGCAAAGGTCCGGTAGCCTACCCGCGCTGCAAGGGCCGAGATCGCCTGT
CCGGCTTTACCTTGGCTGCC

Downstream 100 bases:

>100_bases
ACCCGGCTGCCGACGGAGATTGCGACGGCTCGGATGGGCTTTGACGGCTCATCGGCTTGAGCCACGAATCCCTTGTGTCG
CTTTTTGTGGGATATACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAGLDNHLKRCRTALHGAVSAVIVAVVAVLGLAIAPVADAAAPMATLTVEHTWQTGFIARFAITNSSTVPLSDWKLEFDM
PAGQSVLHTWNSTLTQSGTHYVLTPANWNRVIAPGGSATGGFRGVLTGTYSPPTNCVLNGQYRCT

Sequences:

>Translated_145_residues
MAGLDNHLKRCRTALHGAVSAVIVAVVAVLGLAIAPVADAAAPMATLTVEHTWQTGFIARFAITNSSTVPLSDWKLEFDM
PAGQSVLHTWNSTLTQSGTHYVLTPANWNRVIAPGGSATGGFRGVLTGTYSPPTNCVLNGQYRCT
>Mature_144_residues
AGLDNHLKRCRTALHGAVSAVIVAVVAVLGLAIAPVADAAAPMATLTVEHTWQTGFIARFAITNSSTVPLSDWKLEFDMP
AGQSVLHTWNSTLTQSGTHYVLTPANWNRVIAPGGSATGGFRGVLTGTYSPPTNCVLNGQYRCT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR012291
- InterPro:   IPR001919 [H]

Pfam domain/function: PF00553 CBM_2 [H]

EC number: NA

Molecular weight: Translated: 15250; Mature: 15118

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLDNHLKRCRTALHGAVSAVIVAVVAVLGLAIAPVADAAAPMATLTVEHTWQTGFIAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE
FAITNSSTVPLSDWKLEFDMPAGQSVLHTWNSTLTQSGTHYVLTPANWNRVIAPGGSATG
EEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCC
GFRGVLTGTYSPPTNCVLNGQYRCT
CCEEEEEECCCCCCCEEECCEEEEC
>Mature Secondary Structure 
AGLDNHLKRCRTALHGAVSAVIVAVVAVLGLAIAPVADAAAPMATLTVEHTWQTGFIAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE
FAITNSSTVPLSDWKLEFDMPAGQSVLHTWNSTLTQSGTHYVLTPANWNRVIAPGGSATG
EEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCC
GFRGVLTGTYSPPTNCVLNGQYRCT
CCEEEEEECCCCCCCEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]