| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp126 [H]
Identifier: 41406710
GI number: 41406710
Start: 637218
End: 638465
Strand: Direct
Name: cyp126 [H]
Synonym: MAP0612
Alternate gene names: 41406710
Gene position: 637218-638465 (Clockwise)
Preceding gene: 41406709
Following gene: 41406712
Centisome position: 13.19
GC content: 66.99
Gene sequence:
>1248_bases GTGACTCTCGCCGGCACGCTTTCGCAGATCGACTTCACCGATCTGGACAACTTCGCCAACGGATTTCCGCACCACCTGTT CGCCGTGCATCGGCGCGAGGCGCCGGTGTACTGGCATGAGCCGACGGACAACACCCCGGACGGCGAGGGCTTCTGGTCGG TGGCCTCCTATGCGGAAACCCTTGAGGTGCTCAAGGATCCGGCGACCTACTCGTCGGTGACCGGTGGTGAACGCCCGTAC GGCGGCACGCTGCTGCAGGACCTGGCGATCGCCGGCCAGGTGCTCAACATGATGGACGATCCGCGGCATTCCCAGATCCG GCGGCTGGTCAGCTCCGGCTTGACGCCGCGGATGATCCGCCTGGTCGAAGACGACCTGCGGGCCAGGGCGCGCCGGCTGC TGGACGCGGTGGTGCCGGGCGAGCCGTTCGACTTTCTGGTCGACATCGCCGCCGAGCTGCCGATGCAGATGATCTGCATC CTGCTGGGAGTGCCTGAGTCCGAACGGCATTGGTTGTTTCAGGCGATCGAGCCGCAGTTCGATTTCGGCGGCTCCCGCAA GGCGGCGTTGTCGCAGCTGTCCGAGGCAGAAGCCGGTTCGCGGATGTACGAGTACGGCCAGCAGTTGATCGCCGCCAAGC GCGCCGAGCCGACCGACGACATGTTGTCGGTGGTCGCCAACGCGACGCTGGATGACGCTGCGGCGCCGGCCCTTTCCGAC CTCGAGCTGTACCTGTTCTTCAGCCTGTTGTTCAGCGCCGGGGCGGAAACCACCCGCAATGCGGTTGCGGGCGGGCTGCT GGCGCTGGCCGAGCATCCGGAGCAATTGCGTTGGCTGCGTGACGATCTGGGGGCGCTGCCGACGGCCGTCGAGGAGATGG TGCGCTGGACCTCGCCCTCGCCGTCCAAGCGGCGCACCGCCACCCGCGATGCCACGCTCGGCGGCCAATCGATCAAGGCC GGGCAGAAGGTGCAGATCTGGGAGGGCTCGGCGAATCGCGACGCCAGCGTGTTCGACCGCGCCGACGAATTCGACGTCAC CCGAAAACCCAATCCGCACTTGGGTTTTGGTCAGGGTGTGCACTACTGCCTGGGCGCCAACCTGGCCCGGCTGGAGCTGC GGGTGCTGTTCGAGGAGTTGCTGTCCCGGTTCGGCGCGGTGCGGGTGGTCCGTCCGGTCGAATGGACCCGCAGCAATCGG CACACCGGCATCCGGCACCTGGTCGTGGAACTCCGCGCAGAACAGTGA
Upstream 100 bases:
>100_bases CCGGCGCCGCCGCCGACCAGGTGGACGAGGTGGCCGCCCAGGTGGACGCCCTGGTGAGCCGCTACCCGGACGCGGCCAAG TACACCCCGGGGGCCATCCT
Downstream 100 bases:
>100_bases CGGGCCGGTTCGCCGACGTCGAGGCACGGGCGCTGCCGCTACATCCCGCGGATCGCGATACCGGCCGACTGTAATTCCAG CGCGGCCAGCGCCCGGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTLAGTLSQIDFTDLDNFANGFPHHLFAVHRREAPVYWHEPTDNTPDGEGFWSVASYAETLEVLKDPATYSSVTGGERPY GGTLLQDLAIAGQVLNMMDDPRHSQIRRLVSSGLTPRMIRLVEDDLRARARRLLDAVVPGEPFDFLVDIAAELPMQMICI LLGVPESERHWLFQAIEPQFDFGGSRKAALSQLSEAEAGSRMYEYGQQLIAAKRAEPTDDMLSVVANATLDDAAAPALSD LELYLFFSLLFSAGAETTRNAVAGGLLALAEHPEQLRWLRDDLGALPTAVEEMVRWTSPSPSKRRTATRDATLGGQSIKA GQKVQIWEGSANRDASVFDRADEFDVTRKPNPHLGFGQGVHYCLGANLARLELRVLFEELLSRFGAVRVVRPVEWTRSNR HTGIRHLVVELRAEQ
Sequences:
>Translated_415_residues MTLAGTLSQIDFTDLDNFANGFPHHLFAVHRREAPVYWHEPTDNTPDGEGFWSVASYAETLEVLKDPATYSSVTGGERPY GGTLLQDLAIAGQVLNMMDDPRHSQIRRLVSSGLTPRMIRLVEDDLRARARRLLDAVVPGEPFDFLVDIAAELPMQMICI LLGVPESERHWLFQAIEPQFDFGGSRKAALSQLSEAEAGSRMYEYGQQLIAAKRAEPTDDMLSVVANATLDDAAAPALSD LELYLFFSLLFSAGAETTRNAVAGGLLALAEHPEQLRWLRDDLGALPTAVEEMVRWTSPSPSKRRTATRDATLGGQSIKA GQKVQIWEGSANRDASVFDRADEFDVTRKPNPHLGFGQGVHYCLGANLARLELRVLFEELLSRFGAVRVVRPVEWTRSNR HTGIRHLVVELRAEQ >Mature_414_residues TLAGTLSQIDFTDLDNFANGFPHHLFAVHRREAPVYWHEPTDNTPDGEGFWSVASYAETLEVLKDPATYSSVTGGERPYG GTLLQDLAIAGQVLNMMDDPRHSQIRRLVSSGLTPRMIRLVEDDLRARARRLLDAVVPGEPFDFLVDIAAELPMQMICIL LGVPESERHWLFQAIEPQFDFGGSRKAALSQLSEAEAGSRMYEYGQQLIAAKRAEPTDDMLSVVANATLDDAAAPALSDL ELYLFFSLLFSAGAETTRNAVAGGLLALAEHPEQLRWLRDDLGALPTAVEEMVRWTSPSPSKRRTATRDATLGGQSIKAG QKVQIWEGSANRDASVFDRADEFDVTRKPNPHLGFGQGVHYCLGANLARLELRVLFEELLSRFGAVRVVRPVEWTRSNRH TGIRHLVVELRAEQ
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46019; Mature: 45887
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAGTLSQIDFTDLDNFANGFPHHLFAVHRREAPVYWHEPTDNTPDGEGFWSVASYAET CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHH LEVLKDPATYSSVTGGERPYGGTLLQDLAIAGQVLNMMDDPRHSQIRRLVSSGLTPRMIR HHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH LVEDDLRARARRLLDAVVPGEPFDFLVDIAAELPMQMICILLGVPESERHWLFQAIEPQF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC DFGGSRKAALSQLSEAEAGSRMYEYGQQLIAAKRAEPTDDMLSVVANATLDDAAAPALSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCHHH LELYLFFSLLFSAGAETTRNAVAGGLLALAEHPEQLRWLRDDLGALPTAVEEMVRWTSPS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHCCCCC PSKRRTATRDATLGGQSIKAGQKVQIWEGSANRDASVFDRADEFDVTRKPNPHLGFGQGV CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCH HYCLGANLARLELRVLFEELLSRFGAVRVVRPVEWTRSNRHTGIRHLVVELRAEQ HHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TLAGTLSQIDFTDLDNFANGFPHHLFAVHRREAPVYWHEPTDNTPDGEGFWSVASYAET CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHH LEVLKDPATYSSVTGGERPYGGTLLQDLAIAGQVLNMMDDPRHSQIRRLVSSGLTPRMIR HHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH LVEDDLRARARRLLDAVVPGEPFDFLVDIAAELPMQMICILLGVPESERHWLFQAIEPQF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC DFGGSRKAALSQLSEAEAGSRMYEYGQQLIAAKRAEPTDDMLSVVANATLDDAAAPALSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCHHH LELYLFFSLLFSAGAETTRNAVAGGLLALAEHPEQLRWLRDDLGALPTAVEEMVRWTSPS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHCCCCC PSKRRTATRDATLGGQSIKAGQKVQIWEGSANRDASVFDRADEFDVTRKPNPHLGFGQGV CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCH HYCLGANLARLELRVLFEELLSRFGAVRVVRPVEWTRSNRHTGIRHLVVELRAEQ HHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]