| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is hemH
Identifier: 41406712
GI number: 41406712
Start: 639177
End: 640067
Strand: Direct
Name: hemH
Synonym: MAP0614
Alternate gene names: 41406712
Gene position: 639177-640067 (Clockwise)
Preceding gene: 41406710
Following gene: 41406713
Centisome position: 13.23
GC content: 66.55
Gene sequence:
>891_bases ATGCCTGCACTGTCGGACTACCAGCATCTGGCCAGCGGCAAGGTCCGTGAGCTGTATCGCGTCGACGACGAGCACCTGCT GTTGGTCGCCACCGACCGGATCTCGGCGTACGACTTCGTGCTGGACAGCACCATCCCGGACAAGGGCCGCATCCTGACGG CGATGAGCGTCTTTTTCTTCGGCCTCGTCGATGCCCCCAACCACCTGGCCGGACCGCCCGACGACCCGCGCATTCCCGAC GAGGTGTTGGGCCGCGCGCTGGTGGTGCGCCAGCTCGAGATGCTCCCGGTGGAATGCGTGGCGCGCGGCTACCTGACAGG CTCGGGGCTACTGGACTACCAGGCGACCGGCAAGGTCTGCGGCATCGCGTTGCCGCCCGGACTGGTCGAGGCGAGCAAGT TCGCCGAGCCGCTGTTCACCCCGGCGACCAAGGCCGCCCTGGGCGACCACGACGAGAACATCTCTTTTGCCCGGGTGATC GAGATGGTCGGCGGGGTGCGGGCCAACCAGCTGCGCGACCGCACGTTGCAGATCTACGTCCAGGCCGCCGACCACGCGCT ACGGAAGGGAATCATCATCGCGGACACCAAGTTCGAGTTCGGCACCGACCCGGATGGCAATCTTCTGCTGGCCGACGAGA TCTTCACCCCGGACTCCTCGCGGTACTGGCCGGCCGACGAATACCGGGTCGGCGTGCCGCAGACCAGCTTCGACAAACAG TTCGTCCGCAACTGGCTCACCAGCCCCGAATCCGGCTGGGACCGGCACGGCACCGAACCGCCCCCACCGCTGCCCGACCA CATCATCGAGGCCACCCGCAACCGCTATATCGAAGCCTACGAACGCATTTCCGGGCTGCGTTTCGACGACTGGATCGGTC CGCGCGCATGA
Upstream 100 bases:
>100_bases GGCCAGCCGCCCGGGCCTGGTGGAGTAGGGCAGAAACCGCGGTGTCATAGCCTCGATCCCAGCACACGGCCGGCGTCCCG GTGCCCGATAGGCTGACCGG
Downstream 100 bases:
>100_bases CCGAGACCCACCTGGCCACCTCCGTGCCGCCCGTCGCCAAGCGGGTGGACACCCGCCGCGAGCATCACGGCGACGTCTTC GTTGACCCCTACGAGTGGTT
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPALSDYQHLASGKVRELYRVDDEHLLLVATDRISAYDFVLDSTIPDKGRILTAMSVFFFGLVDAPNHLAGPPDDPRIPD EVLGRALVVRQLEMLPVECVARGYLTGSGLLDYQATGKVCGIALPPGLVEASKFAEPLFTPATKAALGDHDENISFARVI EMVGGVRANQLRDRTLQIYVQAADHALRKGIIIADTKFEFGTDPDGNLLLADEIFTPDSSRYWPADEYRVGVPQTSFDKQ FVRNWLTSPESGWDRHGTEPPPPLPDHIIEATRNRYIEAYERISGLRFDDWIGPRA
Sequences:
>Translated_296_residues MPALSDYQHLASGKVRELYRVDDEHLLLVATDRISAYDFVLDSTIPDKGRILTAMSVFFFGLVDAPNHLAGPPDDPRIPD EVLGRALVVRQLEMLPVECVARGYLTGSGLLDYQATGKVCGIALPPGLVEASKFAEPLFTPATKAALGDHDENISFARVI EMVGGVRANQLRDRTLQIYVQAADHALRKGIIIADTKFEFGTDPDGNLLLADEIFTPDSSRYWPADEYRVGVPQTSFDKQ FVRNWLTSPESGWDRHGTEPPPPLPDHIIEATRNRYIEAYERISGLRFDDWIGPRA >Mature_295_residues PALSDYQHLASGKVRELYRVDDEHLLLVATDRISAYDFVLDSTIPDKGRILTAMSVFFFGLVDAPNHLAGPPDDPRIPDE VLGRALVVRQLEMLPVECVARGYLTGSGLLDYQATGKVCGIALPPGLVEASKFAEPLFTPATKAALGDHDENISFARVIE MVGGVRANQLRDRTLQIYVQAADHALRKGIIIADTKFEFGTDPDGNLLLADEIFTPDSSRYWPADEYRVGVPQTSFDKQF VRNWLTSPESGWDRHGTEPPPPLPDHIIEATRNRYIEAYERISGLRFDDWIGPRA
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=295, Percent_Identity=42.7118644067797, Blast_Score=246, Evalue=4e-66,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 32918; Mature: 32786
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALSDYQHLASGKVRELYRVDDEHLLLVATDRISAYDFVLDSTIPDKGRILTAMSVFFF CCCHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCHHHHEECCCCCCCCHHHHHHHHHHH GLVDAPNHLAGPPDDPRIPDEVLGRALVVRQLEMLPVECVARGYLTGSGLLDYQATGKVC HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCEE GIALPPGLVEASKFAEPLFTPATKAALGDHDENISFARVIEMVGGVRANQLRDRTLQIYV EEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCEEEEEE QAADHALRKGIIIADTKFEFGTDPDGNLLLADEIFTPDSSRYWPADEYRVGVPQTSFDKQ HHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECEECCCCCCCCCCCCCEECCCCCHHHHH FVRNWLTSPESGWDRHGTEPPPPLPDHIIEATRNRYIEAYERISGLRFDDWIGPRA HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC >Mature Secondary Structure PALSDYQHLASGKVRELYRVDDEHLLLVATDRISAYDFVLDSTIPDKGRILTAMSVFFF CCHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCHHHHEECCCCCCCCHHHHHHHHHHH GLVDAPNHLAGPPDDPRIPDEVLGRALVVRQLEMLPVECVARGYLTGSGLLDYQATGKVC HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCEE GIALPPGLVEASKFAEPLFTPATKAALGDHDENISFARVIEMVGGVRANQLRDRTLQIYV EEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCEEEEEE QAADHALRKGIIIADTKFEFGTDPDGNLLLADEIFTPDSSRYWPADEYRVGVPQTSFDKQ HHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECEECCCCCCCCCCCCCEECCCCCHHHHH FVRNWLTSPESGWDRHGTEPPPPLPDHIIEATRNRYIEAYERISGLRFDDWIGPRA HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA