| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406667
Identifier: 41406667
GI number: 41406667
Start: 593991
End: 595592
Strand: Direct
Name: 41406667
Synonym: MAP0569
Alternate gene names: NA
Gene position: 593991-595592 (Clockwise)
Preceding gene: 41406666
Following gene: 41406668
Centisome position: 12.3
GC content: 71.72
Gene sequence:
>1602_bases ATGCATGACAGACTGACCAAGATCCAGCTGGCGATCTTCGCCGTCATCACGGTCATCACGCTGACCGTCATGGCGGTCTT CTACCTGCGGCTGCCCGCCACGTTCGGCATCGGAACCTACGGTGTGAGCGCCGATTTCGTGGCCGGCGGTGGCCTGTACA AGAACGCCAACGTCACCTACCGCGGCGTGGCCGTGGGCCGGGTCGAGTCGGTGGGGCTGAGCCCCAACGGCGTGATCGCG CAGATGCGGCTCAACAGCGAGACGGCCATCCCGTCGAACGTCACCGCCACCGTCAAGAGCGTGTCGGCGGTGGGCGAGCA GTACATCGACCTGGTGCCCCCGAGCGCGCCGGCATCGACCAAGCTGCGCAACGGATCTCGCATCGAGCGGCAGAACACCC GGATCGGCCAGGATGTGGCCGAGCTGTTGCGGCGGTCCGAGACGCTGGTCAACAGCCTGGGCGACACCCGGCTGCGGGAG CTGCTGCACGAGACGTTCATCGCGGCCAACGGCTCGGGCCCCGAGCTGGCCCGGCTGTTCGAGTCGGCCCGGCTGCTGGT GGACGAGGCCAACGCCAACTATCCGCAGGTGTCGCAGTTGATCGATCAGGCCGGCCCGTTCCTGGAGGCCCAGATCCGCG CCGGCGCCGACATCAAGTCGCTGTCCGACGGGCTGGCCCGGTTCACTTCCGAAGTGCGGCAAGCCGATCCGCAACTGCGC GACACCCTGGCGACCGCGCCCGGCGCCACCGACGAGGCCAGCACCGCGTTCTCCGGCATCCGTCCCTCCTTCCCGGCGCT GGCCGCCAGCCTGGCCAACCTGGGCCGGGTGGGCGTCATCTACCACAAGTCGATCGAGCAGCTGCTGGTCGTGCTGCCGG CGCTGTTCGCCGCGATCACCACCGCGGCCGGCGGCGGGCCGCAGGACGAGGGCGCCAAGCTGGACTTCAAGCTCGACCTC AACGACCCGCCGCCGTGCGCCGTCGGGTTCCTGCCGCCGCCGTTGATGCGCACCCCCGCCGACGAGACGGTGCGCGAGCT GCCCAAGGACATGTACTGCAAGACCGCGCAGAACGATCCGAGCACCGTGCGCGGCGCGCGCAACTACCCCTGCCAGGAAT TCCCCGGCAAACGCGCCCCCACGGTGCAACTGTGCCGCGACCCGAAGGGGTATGTGCCGATCGGGCGCAACCCGTGGCGC GGCCCGCCGGTGCCCTATGACACCCCGGTCACCAACGGGCTGAACGTGTTGCCGCCCAATAAGTTCCCGTACATCCCGCC GGACGCGGAGCCCGACCCCGGCACGCCGATCGTCGGGCCGCCGCCGCCGGGGGTGGTGCCCGGGCCGGGGCCGCTGCCCA ACAAGCAGCCGGCCTACGCCCCGCCGCCCCCCAACGACAACGGGCCGCCGCCGCCGTTCACCTCGTGGCAGCCGCCGGGG GTGCCGCCGGTGCCGCCACAGCTGCCGTATCCCAAGTGGCTGCCGCCGCCGGCGCCGCCGGAGGGCATCAATCCGCCGCC GGCGTCCGGGGCCGGAGAAGCCGTGGGGGCCGCCGCCCGGCGGGCAGCCGCAGGCCAGCGGCCCGGCGTACGCCACCTAT GA
Upstream 100 bases:
>100_bases CGACTTCCTGGTCGGCGAGATGGCCAACCTGTCCGGACAGGCGGCCGACCCGTTCAAGATTCCGCCCGGCACGGCTTCGG GACAGTAAGGGGCGGACGCA
Downstream 100 bases:
>100_bases CGAGAAGACCGGCGCGTTTGTCGATCCGGCCGGTGGCACTGGTATCTTCGCGGCCGGCGCGACCGGGACCTCCGGCGCCG AGAACTGGGTGGACCTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; Mce Family F; MCE Family Protein; MCE-Family Protein; Mce-Family F; Mce Related Protein; Mce-Related Protein; MCE-Family; Mce Family
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MHDRLTKIQLAIFAVITVITLTVMAVFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTYRGVAVGRVESVGLSPNGVIA QMRLNSETAIPSNVTATVKSVSAVGEQYIDLVPPSAPASTKLRNGSRIERQNTRIGQDVAELLRRSETLVNSLGDTRLRE LLHETFIAANGSGPELARLFESARLLVDEANANYPQVSQLIDQAGPFLEAQIRAGADIKSLSDGLARFTSEVRQADPQLR DTLATAPGATDEASTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVLPALFAAITTAAGGGPQDEGAKLDFKLDL NDPPPCAVGFLPPPLMRTPADETVRELPKDMYCKTAQNDPSTVRGARNYPCQEFPGKRAPTVQLCRDPKGYVPIGRNPWR GPPVPYDTPVTNGLNVLPPNKFPYIPPDAEPDPGTPIVGPPPPGVVPGPGPLPNKQPAYAPPPPNDNGPPPPFTSWQPPG VPPVPPQLPYPKWLPPPAPPEGINPPPASGAGEAVGAAARRAAAGQRPGVRHL
Sequences:
>Translated_533_residues MHDRLTKIQLAIFAVITVITLTVMAVFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTYRGVAVGRVESVGLSPNGVIA QMRLNSETAIPSNVTATVKSVSAVGEQYIDLVPPSAPASTKLRNGSRIERQNTRIGQDVAELLRRSETLVNSLGDTRLRE LLHETFIAANGSGPELARLFESARLLVDEANANYPQVSQLIDQAGPFLEAQIRAGADIKSLSDGLARFTSEVRQADPQLR DTLATAPGATDEASTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVLPALFAAITTAAGGGPQDEGAKLDFKLDL NDPPPCAVGFLPPPLMRTPADETVRELPKDMYCKTAQNDPSTVRGARNYPCQEFPGKRAPTVQLCRDPKGYVPIGRNPWR GPPVPYDTPVTNGLNVLPPNKFPYIPPDAEPDPGTPIVGPPPPGVVPGPGPLPNKQPAYAPPPPNDNGPPPPFTSWQPPG VPPVPPQLPYPKWLPPPAPPEGINPPPASGAGEAVGAAARRAAAGQRPGVRHL >Mature_533_residues MHDRLTKIQLAIFAVITVITLTVMAVFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTYRGVAVGRVESVGLSPNGVIA QMRLNSETAIPSNVTATVKSVSAVGEQYIDLVPPSAPASTKLRNGSRIERQNTRIGQDVAELLRRSETLVNSLGDTRLRE LLHETFIAANGSGPELARLFESARLLVDEANANYPQVSQLIDQAGPFLEAQIRAGADIKSLSDGLARFTSEVRQADPQLR DTLATAPGATDEASTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVLPALFAAITTAAGGGPQDEGAKLDFKLDL NDPPPCAVGFLPPPLMRTPADETVRELPKDMYCKTAQNDPSTVRGARNYPCQEFPGKRAPTVQLCRDPKGYVPIGRNPWR GPPVPYDTPVTNGLNVLPPNKFPYIPPDAEPDPGTPIVGPPPPGVVPGPGPLPNKQPAYAPPPPNDNGPPPPFTSWQPPG VPPVPPQLPYPKWLPPPAPPEGINPPPASGAGEAVGAAARRAAAGQRPGVRHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56298; Mature: 56298
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDRLTKIQLAIFAVITVITLTVMAVFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEECCCEEE RGVAVGRVESVGLSPNGVIAQMRLNSETAIPSNVTATVKSVSAVGEQYIDLVPPSAPAST EEEEECCHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC KLRNGSRIERQNTRIGQDVAELLRRSETLVNSLGDTRLRELLHETFIAANGSGPELARLF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHH ESARLLVDEANANYPQVSQLIDQAGPFLEAQIRAGADIKSLSDGLARFTSEVRQADPQLR HHHHHHHCCCCCCCHHHHHHHHHHCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH DTLATAPGATDEASTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVLPALFAAIT HHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH TAAGGGPQDEGAKLDFKLDLNDPPPCAVGFLPPPLMRTPADETVRELPKDMYCKTAQNDP HHCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCH STVRGARNYPCQEFPGKRAPTVQLCRDPKGYVPIGRNPWRGPPVPYDTPVTNGLNVLPPN HHHCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KFPYIPPDAEPDPGTPIVGPPPPGVVPGPGPLPNKQPAYAPPPPNDNGPPPPFTSWQPPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPVPPQLPYPKWLPPPAPPEGINPPPASGAGEAVGAAARRAAAGQRPGVRHL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHDRLTKIQLAIFAVITVITLTVMAVFYLRLPATFGIGTYGVSADFVAGGGLYKNANVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEECCCEEE RGVAVGRVESVGLSPNGVIAQMRLNSETAIPSNVTATVKSVSAVGEQYIDLVPPSAPAST EEEEECCHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC KLRNGSRIERQNTRIGQDVAELLRRSETLVNSLGDTRLRELLHETFIAANGSGPELARLF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHH ESARLLVDEANANYPQVSQLIDQAGPFLEAQIRAGADIKSLSDGLARFTSEVRQADPQLR HHHHHHHCCCCCCCHHHHHHHHHHCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH DTLATAPGATDEASTAFSGIRPSFPALAASLANLGRVGVIYHKSIEQLLVVLPALFAAIT HHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH TAAGGGPQDEGAKLDFKLDLNDPPPCAVGFLPPPLMRTPADETVRELPKDMYCKTAQNDP HHCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCH STVRGARNYPCQEFPGKRAPTVQLCRDPKGYVPIGRNPWRGPPVPYDTPVTNGLNVLPPN HHHCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KFPYIPPDAEPDPGTPIVGPPPPGVVPGPGPLPNKQPAYAPPPPNDNGPPPPFTSWQPPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPVPPQLPYPKWLPPPAPPEGINPPPASGAGEAVGAAARRAAAGQRPGVRHL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA