| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406668
Identifier: 41406668
GI number: 41406668
Start: 595725
End: 596456
Strand: Direct
Name: 41406668
Synonym: MAP0570
Alternate gene names: NA
Gene position: 595725-596456 (Clockwise)
Preceding gene: 41406667
Following gene: 41406669
Centisome position: 12.33
GC content: 69.67
Gene sequence:
>732_bases ATGGACCCTGCCGGGGCGGACGCCGCCGCGGCCGACCAACCGACGAGCAGGCCGCGTGCCCGTCGGCGCGCCTCCCGCGC GGCGGGCCCGGCCAAGAGCGAGTCGACCCAGGCCGTGACCGTCGCGACCGAGGTGGCCGCACCGACGCCCGCCCCGAAAC CGTCGGCCAAATCCGGCAAGACGCTCAAGTCGCTCAAGCCGCCGCCGCGGCGCCAGCCGCACCGGACGCTGGTGGCGTGG ATCTCGTTCGCGGCGGCCGTGTTGGCGGTGGGGGCGCTGGCTGGTGGGGTGGCGGTGCTGTTCGTCCAGCAGCGCGACGC CCAGGCCAAACAGTCCCGCGACCAGCGTTTCGTCGACACCGCCACGCAGACGGTGGTCAACATGTTCAGCTACAAGCAGG ACAACATCGACGAGAGCGTGAACCGGTTCGTTAACGGCACCAGCGGGCCGCTGCGCGGCATGCTCAGCGCCAACAACAAC GTCGAGAACCTCAAGGGGCTGTTCCGCTCCACCAACGCCACGTCGGAGGCCGTCGTCAACGGCGCCGCCCTGGAAGGCGT TGACGCCGTTACCGATAACGCGTCGGTGCTGGTATCGGTGCGGGTCACCGTCGCCGACATCGACGGGGTCAACAAGCCGT CCATGCCGTACCGGTTGCGGGTGATCGTGCACGAGGACGACGCCGGGCGGATGACCGGCTACGACCTGAAGTATCCAGAC GGGGGCAATTGA
Upstream 100 bases:
>100_bases GTGGCACTGGTATCTTCGCGGCCGGCGCGACCGGGACCTCCGGCGCCGAGAACTGGGTGGACCTGATGCGTGATCCAAGG CCTATGTGATGGAGCCGGTA
Downstream 100 bases:
>100_bases TGCGATGGCGGCGCCGGCTGCTCGTCGTCGCGGGTTACCTGCTGGCCGTGGCGTTCGTCGGGCTGTCCGCGGTGGCCGGC GCGATGTATTGGGACCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: MCE-Family Protein; MCE Associated Alanine And Valine Rich Protein
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MDPAGADAAAADQPTSRPRARRRASRAAGPAKSESTQAVTVATEVAAPTPAPKPSAKSGKTLKSLKPPPRRQPHRTLVAW ISFAAAVLAVGALAGGVAVLFVQQRDAQAKQSRDQRFVDTATQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNN VENLKGLFRSTNATSEAVVNGAALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPD GGN
Sequences:
>Translated_243_residues MDPAGADAAAADQPTSRPRARRRASRAAGPAKSESTQAVTVATEVAAPTPAPKPSAKSGKTLKSLKPPPRRQPHRTLVAW ISFAAAVLAVGALAGGVAVLFVQQRDAQAKQSRDQRFVDTATQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNN VENLKGLFRSTNATSEAVVNGAALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPD GGN >Mature_243_residues MDPAGADAAAADQPTSRPRARRRASRAAGPAKSESTQAVTVATEVAAPTPAPKPSAKSGKTLKSLKPPPRRQPHRTLVAW ISFAAAVLAVGALAGGVAVLFVQQRDAQAKQSRDQRFVDTATQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNN VENLKGLFRSTNATSEAVVNGAALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPD GGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25610; Mature: 25610
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPAGADAAAADQPTSRPRARRRASRAAGPAKSESTQAVTVATEVAAPTPAPKPSAKSGK CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCC TLKSLKPPPRRQPHRTLVAWISFAAAVLAVGALAGGVAVLFVQQRDAQAKQSRDQRFVDT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH ATQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNNVENLKGLFRSTNATSEAVVN HHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHC GAALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPD CHHHCCCHHHCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC GGN CCC >Mature Secondary Structure MDPAGADAAAADQPTSRPRARRRASRAAGPAKSESTQAVTVATEVAAPTPAPKPSAKSGK CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCC TLKSLKPPPRRQPHRTLVAWISFAAAVLAVGALAGGVAVLFVQQRDAQAKQSRDQRFVDT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH ATQTVVNMFSYKQDNIDESVNRFVNGTSGPLRGMLSANNNVENLKGLFRSTNATSEAVVN HHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHC GAALEGVDAVTDNASVLVSVRVTVADIDGVNKPSMPYRLRVIVHEDDAGRMTGYDLKYPD CHHHCCCHHHCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC GGN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA