| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is lprN
Identifier: 41406666
GI number: 41406666
Start: 592824
End: 593978
Strand: Direct
Name: lprN
Synonym: MAP0568
Alternate gene names: NA
Gene position: 592824-593978 (Clockwise)
Preceding gene: 41406665
Following gene: 41406667
Centisome position: 12.27
GC content: 65.89
Gene sequence:
>1155_bases ATGAGCCGAATGTGGTTGCGCGCCGGCGGATTAGCGACGGGCAGCATGCTGCTGGCCGGCTGCCAGTTCGGCGGGCTGAA CTCGCTGGCGATGCCCGGCACCGCCGGTCACGGCAGCGGCGCCTACTCGATCACCGTCGAACTGCCGGACGTGGCGACGC TGCCGCAGAACTCCCCGGTGATGGTGGACGACGTCACCGTCGGCAGCGTCGCCGGTATTTCAGCCGAACAGCGCTCCGAC GGATCGTTCTATGCGGCAGTGAAATTGGCGCTGGACAAGAACGTGGTGCTGCCGGCCAACTCGACCGCGACGGTCGCCCA GACCTCGCTGCTCGGCTCGATGCACATCGACCTGAACCGCCCCAAGGACAGGCCGGCCGTCGGCCGGCTGACCGACGGGT CGAAGATCGCCGAGGCCAACACCGGTCGCTACCCCACCACCGAAGAGGTGCTCTCGGCGCTCGGTGTCGTGGTGAACAAG GGCAATGTCGGTGCGCTGGAAGAGATCACCGACGAGACCTACCGGGCCGTCGCGGGCCGCCAGGACCAGTTCGTCGACCT GGTGCCCAGGCTGGCCGAGCTGACCTCGGGCCTCAACCGTCAGGTGAACGACATCATCGACGCGGTCGACGGATTGAACC GGTTCTCGGCGAGCCTGGCCCGCGACAAGGACAACCTGGGGCGGGCGCTGGACACGCTGCCCGAGGCGATCCGGGTGCTC AACAAGAACCGGGACCACATCGTCGAGGCGTTCAGCGCGCTGCACAAGCTGGCCGACGTCACCTCGCACATCCTGGCCAA GACCAAGGTGGACTTCGCCGCCGACCTCAAGGACCTGTACGCCGCCGTCAAGGCCCTCAACGACAACCGCCGCAATTTCG TCACCTCGCTGCAGTTGTTGCTGACCTTCCCGTTCCCCAACTTCGGCATCAAGCAGGCGGTGCGCGGTGACTACCTCAAC GTGTTCACCACCTTCGACCTCACCTTGCGCCGGCTCGGCGAAACCTTCTTCACCACGGCGTATTTCGACCCGAACATGGC CCACATGAACGAGATCCTCAACCCGCCCGACTTCCTGGTCGGCGAGATGGCCAACCTGTCCGGACAGGCGGCCGACCCGT TCAAGATTCCGCCCGGCACGGCTTCGGGACAGTAA
Upstream 100 bases:
>100_bases CAGCCCCGGGCCCCGCCCCGGGCAGCGCGTTCGGCCCGCGGCCCGGCCCGCCCCCGGGCCAGGCGCCCGGCGGGCTGGGC GCCGACTTGGGCGGTGGCGG
Downstream 100 bases:
>100_bases GGGGCGGACGCAATGCATGACAGACTGACCAAGATCCAGCTGGCGATCTTCGCCGTCATCACGGTCATCACGCTGACCGT CATGGCGGTCTTCTACCTGC
Product: LprN
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; MCE Family Lipoprotein LprM; MCE-Family Lipoprotein LprN; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein LprN; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; MCE-Family F; LprM Protein; MCE-Family Protein LprN; Fis Family Transcriptional Regulator; MCE-Family LipoE; Lipoprotein
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSRMWLRAGGLATGSMLLAGCQFGGLNSLAMPGTAGHGSGAYSITVELPDVATLPQNSPVMVDDVTVGSVAGISAEQRSD GSFYAAVKLALDKNVVLPANSTATVAQTSLLGSMHIDLNRPKDRPAVGRLTDGSKIAEANTGRYPTTEEVLSALGVVVNK GNVGALEEITDETYRAVAGRQDQFVDLVPRLAELTSGLNRQVNDIIDAVDGLNRFSASLARDKDNLGRALDTLPEAIRVL NKNRDHIVEAFSALHKLADVTSHILAKTKVDFAADLKDLYAAVKALNDNRRNFVTSLQLLLTFPFPNFGIKQAVRGDYLN VFTTFDLTLRRLGETFFTTAYFDPNMAHMNEILNPPDFLVGEMANLSGQAADPFKIPPGTASGQ
Sequences:
>Translated_384_residues MSRMWLRAGGLATGSMLLAGCQFGGLNSLAMPGTAGHGSGAYSITVELPDVATLPQNSPVMVDDVTVGSVAGISAEQRSD GSFYAAVKLALDKNVVLPANSTATVAQTSLLGSMHIDLNRPKDRPAVGRLTDGSKIAEANTGRYPTTEEVLSALGVVVNK GNVGALEEITDETYRAVAGRQDQFVDLVPRLAELTSGLNRQVNDIIDAVDGLNRFSASLARDKDNLGRALDTLPEAIRVL NKNRDHIVEAFSALHKLADVTSHILAKTKVDFAADLKDLYAAVKALNDNRRNFVTSLQLLLTFPFPNFGIKQAVRGDYLN VFTTFDLTLRRLGETFFTTAYFDPNMAHMNEILNPPDFLVGEMANLSGQAADPFKIPPGTASGQ >Mature_383_residues SRMWLRAGGLATGSMLLAGCQFGGLNSLAMPGTAGHGSGAYSITVELPDVATLPQNSPVMVDDVTVGSVAGISAEQRSDG SFYAAVKLALDKNVVLPANSTATVAQTSLLGSMHIDLNRPKDRPAVGRLTDGSKIAEANTGRYPTTEEVLSALGVVVNKG NVGALEEITDETYRAVAGRQDQFVDLVPRLAELTSGLNRQVNDIIDAVDGLNRFSASLARDKDNLGRALDTLPEAIRVLN KNRDHIVEAFSALHKLADVTSHILAKTKVDFAADLKDLYAAVKALNDNRRNFVTSLQLLLTFPFPNFGIKQAVRGDYLNV FTTFDLTLRRLGETFFTTAYFDPNMAHMNEILNPPDFLVGEMANLSGQAADPFKIPPGTASGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41107; Mature: 40976
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMWLRAGGLATGSMLLAGCQFGGLNSLAMPGTAGHGSGAYSITVELPDVATLPQNSPV CCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCE MVDDVTVGSVAGISAEQRSDGSFYAAVKLALDKNVVLPANSTATVAQTSLLGSMHIDLNR EEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCCCHHHHHHHHHHEEEEECCC PKDRPAVGRLTDGSKIAEANTGRYPTTEEVLSALGVVVNKGNVGALEEITDETYRAVAGR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCC QDQFVDLVPRLAELTSGLNRQVNDIIDAVDGLNRFSASLARDKDNLGRALDTLPEAIRVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH NKNRDHIVEAFSALHKLADVTSHILAKTKVDFAADLKDLYAAVKALNDNRRNFVTSLQLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LTFPFPNFGIKQAVRGDYLNVFTTFDLTLRRLGETFFTTAYFDPNMAHMNEILNPPDFLV HCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCHHHHH GEMANLSGQAADPFKIPPGTASGQ HHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRMWLRAGGLATGSMLLAGCQFGGLNSLAMPGTAGHGSGAYSITVELPDVATLPQNSPV CCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCE MVDDVTVGSVAGISAEQRSDGSFYAAVKLALDKNVVLPANSTATVAQTSLLGSMHIDLNR EEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCCCHHHHHHHHHHEEEEECCC PKDRPAVGRLTDGSKIAEANTGRYPTTEEVLSALGVVVNKGNVGALEEITDETYRAVAGR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCC QDQFVDLVPRLAELTSGLNRQVNDIIDAVDGLNRFSASLARDKDNLGRALDTLPEAIRVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH NKNRDHIVEAFSALHKLADVTSHILAKTKVDFAADLKDLYAAVKALNDNRRNFVTSLQLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LTFPFPNFGIKQAVRGDYLNVFTTFDLTLRRLGETFFTTAYFDPNMAHMNEILNPPDFLV HCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCCHHHHH GEMANLSGQAADPFKIPPGTASGQ HHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA