| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is hsaA [H]
Identifier: 41406595
GI number: 41406595
Start: 524978
End: 526162
Strand: Direct
Name: hsaA [H]
Synonym: MAP0497
Alternate gene names: 41406595
Gene position: 524978-526162 (Clockwise)
Preceding gene: 41406592
Following gene: 41406596
Centisome position: 10.87
GC content: 69.28
Gene sequence:
>1185_bases GTGACGTCCATTCAACAGCGTGATGCCCAGTCCGTCTTGGCGGGCATCGACGATCTGCTTCCGCGGATTCGGGAGCGCGC TCAGGCCACGGAGGATCTGCGCCGGCTGCCCGACGAGACCGTAGCCGACCTTCAGGACGTCGGGTTCTTCACCCTGCTGC AGCCCGAGCAGTGGGGTGGGCTGCAGTGCGACCCCACGCTGTTCTACGAGGCGGTCCGCCGGCTGGCCAGCGCGTGCGGT TCCACCGGCTGGGTGAGCTCGATCATCGGCGTGCACAACTGGCACCTGGCCCTGTTCGACCAGCAGGCCCAGGAGGAGGT CTGGGGCGAGGACCCCAACGTGCGGATCTCCTCGTCGTATGCGCCGATGGGCGCCGGCGTGGTGACCGACGGCGGCTACC TGGTCAACGGTTCGTGGAACTGGTCCTCCGGCTGCGACCACGCCACCTGGGCGTTCCTCGGCGGCCCGGTGATCAAGGAC GGCCGCCCGGTCGACTTCGGCAGCTTCCTGATCCCGCGCAGCGAGTACCGCATCGACGACGTGTGGCACGTGGTCGGCCT GCGCGGCACCGGCAGCAACACCGTCGTCGTCAAGGACGTGTTCGTGCCGCGACACCGGTTCCTGTCCTACAAGGCGATGA ACGACGGCACCGCCGGCGGCTATCAGACCAACACCGCGCCGGTATACAAGATGCCTTGGGGCACAATGCATCCCACCACC ATCTCGGCGCCCATCGTCGGCATGGCATACGGGGCGTACGCCGCCCACGTCGAGCATCAGGGCAAGCGGGTGCGCGCGGC GTTCGCCGGCGAGAAGGCCAAGGACGACCCGTTCGCCAAGGTCCGCATCGCCGAGGCGGCCAGCGACATCGACGCCGCGT GGCGCCAGCTGTCCGGCAACGTGGCCGACGAGTACGCGCTGCTGTCCGCCGGCAAGGAGATCCCGTTCGAACTGCGCGCC CGCGCCCGCCGCGACCAGGTGCGCGCCACCGGGCGCGCGATCGCCTCCATCGACCGGCTGTTCGAGGCTTCCGGGGCCAC CGCGTTGGCCAATGACCAACCGGTGCAACGCTTCTGGCGTGACGCGCACGCCGGCCGGGTGCACGCGGCCAACGACCCCG AGCGGGCCTACCAGATCTTCGGAAACCACGAGTTCGGGTTGCCGCCGGGCGACACGATGGTATGA
Upstream 100 bases:
>100_bases GCTACCAGCCGCAGGAATACCCTGCTCGACACGAATCGGAACGTGTTCTAGTCTCTGGGGTAAGTCCGCTGAGTAAGTTT GGCCCAGGAAGGCAAACCTA
Downstream 100 bases:
>100_bases CCGCGACCGAGGAGTTGACGTTCGAGTCGACCTCGCGCTTCGCCGAAGTCGACGTCGACGGGCCGCTCAAGCTGCACTAC CACGAGGCCGGTTTGTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-hydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione 4-hydroxylase [H]
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTSIQQRDAQSVLAGIDDLLPRIRERAQATEDLRRLPDETVADLQDVGFFTLLQPEQWGGLQCDPTLFYEAVRRLASACG STGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRISSSYAPMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKD GRPVDFGSFLIPRSEYRIDDVWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQTNTAPVYKMPWGTMHPTT ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGNVADEYALLSAGKEIPFELRA RARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWRDAHAGRVHAANDPERAYQIFGNHEFGLPPGDTMV
Sequences:
>Translated_394_residues MTSIQQRDAQSVLAGIDDLLPRIRERAQATEDLRRLPDETVADLQDVGFFTLLQPEQWGGLQCDPTLFYEAVRRLASACG STGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRISSSYAPMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKD GRPVDFGSFLIPRSEYRIDDVWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQTNTAPVYKMPWGTMHPTT ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGNVADEYALLSAGKEIPFELRA RARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWRDAHAGRVHAANDPERAYQIFGNHEFGLPPGDTMV >Mature_393_residues TSIQQRDAQSVLAGIDDLLPRIRERAQATEDLRRLPDETVADLQDVGFFTLLQPEQWGGLQCDPTLFYEAVRRLASACGS TGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRISSSYAPMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKDG RPVDFGSFLIPRSEYRIDDVWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQTNTAPVYKMPWGTMHPTTI SAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGNVADEYALLSAGKEIPFELRAR ARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWRDAHAGRVHAANDPERAYQIFGNHEFGLPPGDTMV
Specific function: Catalyzes the o-hydroxylation of 3-hydroxy-9,10- seconandrost-1,3,5(10)-triene-9,17-dione (3-HSA) to 3,4-dihydroxy- 9,10-seconandrost-1,3,5(10)-triene-9,17-dione (3,4-DHSA) in the catabolism of cholesterol. Also catalyzes the o-hydroxylation of a range of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FADH(2)-utilizing monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013107 - InterPro: IPR006092 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 43214; Mature: 43083
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIQQRDAQSVLAGIDDLLPRIRERAQATEDLRRLPDETVADLQDVGFFTLLQPEQWGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCC LQCDPTLFYEAVRRLASACGSTGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRISSSY CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCCEEEECCC APMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRSEYRIDD CCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCC VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQTNTAPVYKMPWGTMHPTT EEEEEEECCCCCCEEEEEEECCCHHHHEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCC ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGN CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC VADEYALLSAGKEIPFELRARARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWR CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHH DAHAGRVHAANDPERAYQIFGNHEFGLPPGDTMV HHCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TSIQQRDAQSVLAGIDDLLPRIRERAQATEDLRRLPDETVADLQDVGFFTLLQPEQWGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCC LQCDPTLFYEAVRRLASACGSTGWVSSIIGVHNWHLALFDQQAQEEVWGEDPNVRISSSY CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECHHHHHHHCCCCCCEEEECCC APMGAGVVTDGGYLVNGSWNWSSGCDHATWAFLGGPVIKDGRPVDFGSFLIPRSEYRIDD CCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCC VWHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMNDGTAGGYQTNTAPVYKMPWGTMHPTT EEEEEEECCCCCCEEEEEEECCCHHHHEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCC ISAPIVGMAYGAYAAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLSGN CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC VADEYALLSAGKEIPFELRARARRDQVRATGRAIASIDRLFEASGATALANDQPVQRFWR CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHH DAHAGRVHAANDPERAYQIFGNHEFGLPPGDTMV HHCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]