Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41406592

Identifier: 41406592

GI number: 41406592

Start: 522136

End: 523089

Strand: Direct

Name: 41406592

Synonym: MAP0494

Alternate gene names: NA

Gene position: 522136-523089 (Clockwise)

Preceding gene: 41406590

Following gene: 41406595

Centisome position: 10.81

GC content: 73.9

Gene sequence:

>954_bases
GTGATGCGACCTTTGTCCCGTCACTGGTGTAGGGTGATGGGACCATTGTCTCATCACTCGAAGGAGCAGCTCGTGCGCGT
ACTCGTCACCGGCGCCAGCGGAGGAATCGGCTCGGCCGTCGTCAAAGAATTGCTCGCCGCCGGTCATCACGTCATCGGCC
TGGCCCGCTCCGAGGCTTCGGCCGCAACCGTCAGCGGACTCGGCGCCGAACCGCTGCGCGGCGACATCGCCGACCTCGAC
GTCCTGCAGAAGGCGGCGGTCGACACCGACGGCGTCGCCTACCTGGCCTTCTCACACGACTTCAGCGACGTCGGGGACGC
GATCGCGGACGAGGCCCGCGCGATCGACGCGCTGGGGGCCGCGCTCGCCGACACCGGCAAACCGCTGGTGCTGGCCAGCG
GGACCCCGGCCCGGCCCGGCTCGGTGAGCACCGAGGACGACCCCTTCATCGCCGACGGGCCGCTGGCCGGGCGCGGCCGC
ACCGGCCAGGCCGTCGTCGCGCTGGCCGGGCGCGGTGTCCGCTCGGCCGTGGTGCGGCTGCCGCGCGCGGTGCACGATGC
CGGCGGCCGCTACGGCCTGGTGGGCATCCTGATCCAGCTCGCCCGGCAGCGCGGCGTGTCGTCCTTCGCCGGCGACGGCA
CCCAACGCTGGCCGGCCGTGCATCGCGACGACGCCGCGGCGTTGTTCCGGCTCGCCCTCGAGCAGGCCCCGGCCGGCTCG
GTGCTGCACGCGGTGGGGGACGAGGGCGTTCCGCTGCGCGCGATCGCCGAGGTGATCGGCCGCCGGCTCGGCGTGCCCGT
CGAGTCCGCCCCGGCCGACACCTTCGGTCCGCTCGGCCAAGTCTTCGCCGTCGACCAGCCCTCGTCCAGCGCGCTGACCC
AGCGGCGCTTCGGGTGGCAGCCCGTCGGCCCCGGCCTGCTGGACGACCTCGAAACCGGCGTCTACCCGGAATAG

Upstream 100 bases:

>100_bases
CGGTCGTCTGGTCGTAGCCGCGCTCGTTGAACAGGTCCAGCGCCGCGGCGACCAGGCGTGCGCGCGCGTCGGGTTCCCAG
CGAGCCATGGCCCCACCTTA

Downstream 100 bases:

>100_bases
GTCACGAGAAGGTGGTCACCGCGCAGGTGCTGGGCGAGGTGATGTTGACCCCGGAGTAGACCACCTGGATGTGGGTGCAC
AGGATGACGTTGTTGTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Polysaccharide Synthesis Protein; Dyhydroflavanol-4-Reductase; NAD-Dependent Epimerase/Dehydratase Family Protein; UDP-Glucose 4-Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; Dyhydroflavanol-4-Reductas; Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; Male Sterility Protein-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEASAATVSGLGAEPLRGDIADLD
VLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGAALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGR
TGQAVVALAGRGVRSAVVRLPRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS
VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQPVGPGLLDDLETGVYPE

Sequences:

>Translated_317_residues
MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEASAATVSGLGAEPLRGDIADLD
VLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGAALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGR
TGQAVVALAGRGVRSAVVRLPRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS
VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQPVGPGLLDDLETGVYPE
>Mature_317_residues
MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEASAATVSGLGAEPLRGDIADLD
VLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGAALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGR
TGQAVVALAGRGVRSAVVRLPRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS
VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQPVGPGLLDDLETGVYPE

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322972, Length=293, Percent_Identity=41.9795221843003, Blast_Score=220, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32615; Mature: 32615

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEAS
CCCCHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC
AATVSGLGAEPLRGDIADLDVLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGA
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH
ALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGRTGQAVVALAGRGVRSAVVRL
HHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHH
PRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCH
VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQ
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCC
PVGPGLLDDLETGVYPE
CCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEAS
CCCCHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC
AATVSGLGAEPLRGDIADLDVLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGA
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH
ALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGRTGQAVVALAGRGVRSAVVRL
HHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHH
PRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCH
VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQ
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCC
PVGPGLLDDLETGVYPE
CCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA