| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406592
Identifier: 41406592
GI number: 41406592
Start: 522136
End: 523089
Strand: Direct
Name: 41406592
Synonym: MAP0494
Alternate gene names: NA
Gene position: 522136-523089 (Clockwise)
Preceding gene: 41406590
Following gene: 41406595
Centisome position: 10.81
GC content: 73.9
Gene sequence:
>954_bases GTGATGCGACCTTTGTCCCGTCACTGGTGTAGGGTGATGGGACCATTGTCTCATCACTCGAAGGAGCAGCTCGTGCGCGT ACTCGTCACCGGCGCCAGCGGAGGAATCGGCTCGGCCGTCGTCAAAGAATTGCTCGCCGCCGGTCATCACGTCATCGGCC TGGCCCGCTCCGAGGCTTCGGCCGCAACCGTCAGCGGACTCGGCGCCGAACCGCTGCGCGGCGACATCGCCGACCTCGAC GTCCTGCAGAAGGCGGCGGTCGACACCGACGGCGTCGCCTACCTGGCCTTCTCACACGACTTCAGCGACGTCGGGGACGC GATCGCGGACGAGGCCCGCGCGATCGACGCGCTGGGGGCCGCGCTCGCCGACACCGGCAAACCGCTGGTGCTGGCCAGCG GGACCCCGGCCCGGCCCGGCTCGGTGAGCACCGAGGACGACCCCTTCATCGCCGACGGGCCGCTGGCCGGGCGCGGCCGC ACCGGCCAGGCCGTCGTCGCGCTGGCCGGGCGCGGTGTCCGCTCGGCCGTGGTGCGGCTGCCGCGCGCGGTGCACGATGC CGGCGGCCGCTACGGCCTGGTGGGCATCCTGATCCAGCTCGCCCGGCAGCGCGGCGTGTCGTCCTTCGCCGGCGACGGCA CCCAACGCTGGCCGGCCGTGCATCGCGACGACGCCGCGGCGTTGTTCCGGCTCGCCCTCGAGCAGGCCCCGGCCGGCTCG GTGCTGCACGCGGTGGGGGACGAGGGCGTTCCGCTGCGCGCGATCGCCGAGGTGATCGGCCGCCGGCTCGGCGTGCCCGT CGAGTCCGCCCCGGCCGACACCTTCGGTCCGCTCGGCCAAGTCTTCGCCGTCGACCAGCCCTCGTCCAGCGCGCTGACCC AGCGGCGCTTCGGGTGGCAGCCCGTCGGCCCCGGCCTGCTGGACGACCTCGAAACCGGCGTCTACCCGGAATAG
Upstream 100 bases:
>100_bases CGGTCGTCTGGTCGTAGCCGCGCTCGTTGAACAGGTCCAGCGCCGCGGCGACCAGGCGTGCGCGCGCGTCGGGTTCCCAG CGAGCCATGGCCCCACCTTA
Downstream 100 bases:
>100_bases GTCACGAGAAGGTGGTCACCGCGCAGGTGCTGGGCGAGGTGATGTTGACCCCGGAGTAGACCACCTGGATGTGGGTGCAC AGGATGACGTTGTTGTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Polysaccharide Synthesis Protein; Dyhydroflavanol-4-Reductase; NAD-Dependent Epimerase/Dehydratase Family Protein; UDP-Glucose 4-Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; Dyhydroflavanol-4-Reductas; Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; Male Sterility Protein-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEASAATVSGLGAEPLRGDIADLD VLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGAALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGR TGQAVVALAGRGVRSAVVRLPRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQPVGPGLLDDLETGVYPE
Sequences:
>Translated_317_residues MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEASAATVSGLGAEPLRGDIADLD VLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGAALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGR TGQAVVALAGRGVRSAVVRLPRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQPVGPGLLDDLETGVYPE >Mature_317_residues MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEASAATVSGLGAEPLRGDIADLD VLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGAALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGR TGQAVVALAGRGVRSAVVRLPRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQPVGPGLLDDLETGVYPE
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322972, Length=293, Percent_Identity=41.9795221843003, Blast_Score=220, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32615; Mature: 32615
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEAS CCCCHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC AATVSGLGAEPLRGDIADLDVLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGA HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH ALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGRTGQAVVALAGRGVRSAVVRL HHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHH PRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS HHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCH VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQ HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCC PVGPGLLDDLETGVYPE CCCCHHHHHHHCCCCCC >Mature Secondary Structure MMRPLSRHWCRVMGPLSHHSKEQLVRVLVTGASGGIGSAVVKELLAAGHHVIGLARSEAS CCCCHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCC AATVSGLGAEPLRGDIADLDVLQKAAVDTDGVAYLAFSHDFSDVGDAIADEARAIDALGA HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHH ALADTGKPLVLASGTPARPGSVSTEDDPFIADGPLAGRGRTGQAVVALAGRGVRSAVVRL HHHCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHH PRAVHDAGGRYGLVGILIQLARQRGVSSFAGDGTQRWPAVHRDDAAALFRLALEQAPAGS HHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCH VLHAVGDEGVPLRAIAEVIGRRLGVPVESAPADTFGPLGQVFAVDQPSSSALTQRRFGWQ HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCC PVGPGLLDDLETGVYPE CCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA