| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is hsaD [H]
Identifier: 41406596
GI number: 41406596
Start: 526159
End: 527040
Strand: Direct
Name: hsaD [H]
Synonym: MAP0498
Alternate gene names: 41406596
Gene position: 526159-527040 (Clockwise)
Preceding gene: 41406595
Following gene: 41406597
Centisome position: 10.89
GC content: 68.03
Gene sequence:
>882_bases ATGACCGCGACCGAGGAGTTGACGTTCGAGTCGACCTCGCGCTTCGCCGAAGTCGACGTCGACGGGCCGCTCAAGCTGCA CTACCACGAGGCCGGTTTGTCCTTCAAGGGCACCGGGCGCACGGTGGTGCTGCTGCACGGCGGCGGCCCGGGCGCGGCCA GCTGGACCAACTTCGGCCGCAACATCCCGGTGCTGGCCCGGCACTTCCACGTGCTGGCCGTCGACCAGCCCGGCTACGGC CTGTCCGACAAGCGCGCCGAGCACGGACAGTTCAACCGCTACGCCGCCCGGGCGCTCAACGGGCTGTTCGAGCAGCTGGA GCTGGGACGCGTTCCGCTGGTGGGCAATTCGCTGGGCGGGGGCACCGCGGTGCGGTTCGCCCTGGACTACCCGGACAAGG CCGGGCGGCTGGTACTGATGGGCCCCGGCGGGTTGAGCATCAACCTGTTCGCGCCCGACCCCACCGAGGGCGTCAAACGG CTGGGAAAGTTCTCCGCCGAGCCGACGCGGGAAAACCTCGAGGCGTTCCTGCGGGTGATGGTCTACGACCAGAAGCTGAT CACCGACGAATTGATCGACGAGCGGTTCGCGCTGGCCAGCACGCCGGAATCGCTGGCGGCCACCCGGGCGATGGGAATGT CGTTCGCGGGGGCCGACTTCGAGCTGGGCATGATGTGGCGCGAGGTGCACCGGCTGCGGCAACCGGTGCTGCTGATCTGG GGTCGCGAGGACCGGGTCAACCCGCTCGATGGCGCGCTGGTCGCGCTGAAAACCATTGCCCGCGCCCAGCTTCACGTGTT CGGGCAGTGTGGGCACTGGGCGCAGGTGGAGAAATTCGACGAGTTCAACAAGCTCACCATCGATTTCCTGGGAGGTGCGT GA
Upstream 100 bases:
>100_bases ACGCGCACGCCGGCCGGGTGCACGCGGCCAACGACCCCGAGCGGGCCTACCAGATCTTCGGAAACCACGAGTTCGGGTTG CCGCCGGGCGACACGATGGT
Downstream 100 bases:
>100_bases TGAGCAACGGAGCCATCAGGTCGCTGGGCTATCTGCGCATCGAGGCCACCGACATGGCGGCCTGGCGCGACTACGGCCTG AAGGTTCTCGGCATGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; HOPDA hydrolase; Meta-cleavage product hydrolase; MCP hydrolase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTATEELTFESTSRFAEVDVDGPLKLHYHEAGLSFKGTGRTVVLLHGGGPGAASWTNFGRNIPVLARHFHVLAVDQPGYG LSDKRAEHGQFNRYAARALNGLFEQLELGRVPLVGNSLGGGTAVRFALDYPDKAGRLVLMGPGGLSINLFAPDPTEGVKR LGKFSAEPTRENLEAFLRVMVYDQKLITDELIDERFALASTPESLAATRAMGMSFAGADFELGMMWREVHRLRQPVLLIW GREDRVNPLDGALVALKTIARAQLHVFGQCGHWAQVEKFDEFNKLTIDFLGGA
Sequences:
>Translated_293_residues MTATEELTFESTSRFAEVDVDGPLKLHYHEAGLSFKGTGRTVVLLHGGGPGAASWTNFGRNIPVLARHFHVLAVDQPGYG LSDKRAEHGQFNRYAARALNGLFEQLELGRVPLVGNSLGGGTAVRFALDYPDKAGRLVLMGPGGLSINLFAPDPTEGVKR LGKFSAEPTRENLEAFLRVMVYDQKLITDELIDERFALASTPESLAATRAMGMSFAGADFELGMMWREVHRLRQPVLLIW GREDRVNPLDGALVALKTIARAQLHVFGQCGHWAQVEKFDEFNKLTIDFLGGA >Mature_292_residues TATEELTFESTSRFAEVDVDGPLKLHYHEAGLSFKGTGRTVVLLHGGGPGAASWTNFGRNIPVLARHFHVLAVDQPGYGL SDKRAEHGQFNRYAARALNGLFEQLELGRVPLVGNSLGGGTAVRFALDYPDKAGRLVLMGPGGLSINLFAPDPTEGVKRL GKFSAEPTRENLEAFLRVMVYDQKLITDELIDERFALASTPESLAATRAMGMSFAGADFELGMMWREVHRLRQPVLLIWG REDRVNPLDGALVALKTIARAQLHVFGQCGHWAQVEKFDEFNKLTIDFLGGA
Specific function: Catalyzes the hydrolysis of a carbon-carbon bond in 4,5- 9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oic acid (4,9-DSHA) to yield 9,17-dioxo-1,2,3,4,10,19- hexanorandrostan-5-oic acid (DOHNAA) and 2-hydroxy-hexa-2,4- dienoic acid (HHD). Is
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HsaD family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=300, Percent_Identity=37.6666666666667, Blast_Score=203, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.7.1.8 [H]
Molecular weight: Translated: 32120; Mature: 31989
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATEELTFESTSRFAEVDVDGPLKLHYHEAGLSFKGTGRTVVLLHGGGPGAASWTNFGR CCCCCCCEECCCCCEEEECCCCCEEEEEEECCCEEECCCCEEEEEECCCCCCCCHHHCCC NIPVLARHFHVLAVDQPGYGLSDKRAEHGQFNRYAARALNGLFEQLELGRVPLVGNSLGG CCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCC GTAVRFALDYPDKAGRLVLMGPGGLSINLFAPDPTEGVKRLGKFSAEPTRENLEAFLRVM CEEEEEEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHH VYDQKLITDELIDERFALASTPESLAATRAMGMSFAGADFELGMMWREVHRLRQPVLLIW HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHHHHCCCEEEEE GREDRVNPLDGALVALKTIARAQLHVFGQCGHWAQVEKFDEFNKLTIDFLGGA CCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCEEEEECCCC >Mature Secondary Structure TATEELTFESTSRFAEVDVDGPLKLHYHEAGLSFKGTGRTVVLLHGGGPGAASWTNFGR CCCCCCEECCCCCEEEECCCCCEEEEEEECCCEEECCCCEEEEEECCCCCCCCHHHCCC NIPVLARHFHVLAVDQPGYGLSDKRAEHGQFNRYAARALNGLFEQLELGRVPLVGNSLGG CCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCC GTAVRFALDYPDKAGRLVLMGPGGLSINLFAPDPTEGVKRLGKFSAEPTRENLEAFLRVM CEEEEEEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHH VYDQKLITDELIDERFALASTPESLAATRAMGMSFAGADFELGMMWREVHRLRQPVLLIW HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHHHHCCCEEEEE GREDRVNPLDGALVALKTIARAQLHVFGQCGHWAQVEKFDEFNKLTIDFLGGA CCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]