| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41406384
Identifier: 41406384
GI number: 41406384
Start: 304940
End: 305200
Strand: Direct
Name: 41406384
Synonym: MAP0286
Alternate gene names: NA
Gene position: 304940-305200 (Clockwise)
Preceding gene: 41406379
Following gene: 41406385
Centisome position: 6.31
GC content: 67.82
Gene sequence:
>261_bases GTGATGACCGCCGAATTCCTGGAGCACCAGCGTTCCATCGGCAACGACTTGCTGACGCCGGTCCCCGAGTACCGGTTCCC GGGTCTGCTGCCCGGCGACCGCTGGTGCGTGACCGCGCTGAACTGGCTGCGCGCGCATCACGACGGGTGCGCGGCCCCGG TGGTGTTGGCGTCGACGCACGAGAGCACCCTTGAGGTGGTGCCGCTGGAAGCGCTGCAGGAACACAAGATCGACGTCCCC GACGACCTGGCCAACCTCTAG
Upstream 100 bases:
>100_bases TCCGCTGCAACCCTGTGGCACCGATCCGCTGACCGGTTTCTACCGCGACGGCTGTTGCTCGACGGGACCGCAGGACCTTG GGCGGCACACGATTTGCGCC
Downstream 100 bases:
>100_bases GATCCCGGTGGGTTCCGCGGTTGACGACATCGACTTCGACGACCTGACCTCGCCCCGGCTCACCGACGTCCAACGTCAGA TCCTGGAGTTCACCGAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MMTAEFLEHQRSIGNDLLTPVPEYRFPGLLPGDRWCVTALNWLRAHHDGCAAPVVLASTHESTLEVVPLEALQEHKIDVP DDLANL
Sequences:
>Translated_86_residues MMTAEFLEHQRSIGNDLLTPVPEYRFPGLLPGDRWCVTALNWLRAHHDGCAAPVVLASTHESTLEVVPLEALQEHKIDVP DDLANL >Mature_86_residues MMTAEFLEHQRSIGNDLLTPVPEYRFPGLLPGDRWCVTALNWLRAHHDGCAAPVVLASTHESTLEVVPLEALQEHKIDVP DDLANL
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9583; Mature: 9583
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTAEFLEHQRSIGNDLLTPVPEYRFPGLLPGDRWCVTALNWLRAHHDGCAAPVVLASTH CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC ESTLEVVPLEALQEHKIDVPDDLANL CCCEEEECHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MMTAEFLEHQRSIGNDLLTPVPEYRFPGLLPGDRWCVTALNWLRAHHDGCAAPVVLASTH CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC ESTLEVVPLEALQEHKIDVPDDLANL CCCEEEECHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA