| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406385
Identifier: 41406385
GI number: 41406385
Start: 305208
End: 306077
Strand: Direct
Name: 41406385
Synonym: MAP0287
Alternate gene names: NA
Gene position: 305208-306077 (Clockwise)
Preceding gene: 41406384
Following gene: 41406386
Centisome position: 6.32
GC content: 67.47
Gene sequence:
>870_bases GTGGGTTCCGCGGTTGACGACATCGACTTCGACGACCTGACCTCGCCCCGGCTCACCGACGTCCAACGTCAGATCCTGGA GTTCACCGAGGCCAAGCCCGTCGATCTCGACATCGACCGGATGCTCGCCGAGGCGATCGAACATGCCGGCCTGCCCGGCG CCGACCTCGACGACACGCACGGCTTCGTCGACCGTCTGCACGTCCACGTCGCGGCGATCGAAGCCGACCACGGGCTGCGC CAGCTCACCCGGGGGTCGCTGCGGCAACGCGTGGTGCGGCTGCTGCGCAACCGGTTGTCGCTGACCGAGCTGCTCCAGCG GTATCCCGAGATCGAGTCCATCCCGATCGAGGAGCCGCTCATCGTCGTCGGGATGCCGCGTTCGGGCACCACGCATCTGG TGAACCTGATCGCCTGCGACCCGCGCCGGCGCGCACTGCCCTATTGGGAGAGCCAGGAGCCTATCCCGGCCCGTGGTCAG GGCCCCGACGTCTTCGGTGTCGACCCCCGGTATGCCCGCGCCAAGGCGGAACGAGGCGATCGAGGAGGAAGTGGAACTGC TCGACCTCGATCTGGCCTCCTACGTCCTGGAATGGCATGCGCGGGTGCCCGCCTGGCGCGATCACTACCTGAGCCTGGAC CAAACCCGGCACTACGCCTACCTGAAGAAGGTGTTGCAGGCGTTGACCTTCCTGCGCGGGCCGCGGACCTGGGTGCTCAA AAGTCCGCAGCACTGCGAGCAGCTCGGCCCGCTGATGGCGACCTTCCCCGATGCGACGATCGCGTTCACGCACCGCGACC CCGTCGCGGTGATCCAGTCGGCGATCACCATGATGGCCTACTCGGATCGGTTGCGCCGCACCAGCATTGA
Upstream 100 bases:
>100_bases GCGTCGACGCACGAGAGCACCCTTGAGGTGGTGCCGCTGGAAGCGCTGCAGGAACACAAGATCGACGTCCCCGACGACCT GGCCAACCTCTAGGATCCCG
Downstream 100 bases:
>100_bases CCCGCAGTGGCTGCTGGACTACTGGAGCGACCGGGTGCACCGACTGCTGAGCGCCTGCGTCCGCGACCGCGACCTGGTGG CCCCGGAACGCAGCGTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MGSAVDDIDFDDLTSPRLTDVQRQILEFTEAKPVDLDIDRMLAEAIEHAGLPGADLDDTHGFVDRLHVHVAAIEADHGLR QLTRGSLRQRVVRLLRNRLSLTELLQRYPEIESIPIEEPLIVVGMPRSGTTHLVNLIACDPRRRALPYWESQEPIPARGQ GPDVFGVDPRYARAKAERGDRGGSGTARPRSGLLRPGMACAGARLARSLPEPGPNPALRLPEEGVAGVDLPARAADLGAQ KSAALRAARPADGDLPRCDDRVHAPRPRRGDPVGDHHDGLLGSVAPHQH
Sequences:
>Translated_289_residues MGSAVDDIDFDDLTSPRLTDVQRQILEFTEAKPVDLDIDRMLAEAIEHAGLPGADLDDTHGFVDRLHVHVAAIEADHGLR QLTRGSLRQRVVRLLRNRLSLTELLQRYPEIESIPIEEPLIVVGMPRSGTTHLVNLIACDPRRRALPYWESQEPIPARGQ GPDVFGVDPRYARAKAERGDRGGSGTARPRSGLLRPGMACAGARLARSLPEPGPNPALRLPEEGVAGVDLPARAADLGAQ KSAALRAARPADGDLPRCDDRVHAPRPRRGDPVGDHHDGLLGSVAPHQH >Mature_288_residues GSAVDDIDFDDLTSPRLTDVQRQILEFTEAKPVDLDIDRMLAEAIEHAGLPGADLDDTHGFVDRLHVHVAAIEADHGLRQ LTRGSLRQRVVRLLRNRLSLTELLQRYPEIESIPIEEPLIVVGMPRSGTTHLVNLIACDPRRRALPYWESQEPIPARGQG PDVFGVDPRYARAKAERGDRGGSGTARPRSGLLRPGMACAGARLARSLPEPGPNPALRLPEEGVAGVDLPARAADLGAQK SAALRAARPADGDLPRCDDRVHAPRPRRGDPVGDHHDGLLGSVAPHQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31372; Mature: 31241
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSAVDDIDFDDLTSPRLTDVQRQILEFTEAKPVDLDIDRMLAEAIEHAGLPGADLDDTH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH GFVDRLHVHVAAIEADHGLRQLTRGSLRQRVVRLLRNRLSLTELLQRYPEIESIPIEEPL HHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCE IVVGMPRSGTTHLVNLIACDPRRRALPYWESQEPIPARGQGPDVFGVDPRYARAKAERGD EEEECCCCCHHHEEHEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC RGGSGTARPRSGLLRPGMACAGARLARSLPEPGPNPALRLPEEGVAGVDLPARAADLGAQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCH KSAALRAARPADGDLPRCDDRVHAPRPRRGDPVGDHHDGLLGSVAPHQH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSAVDDIDFDDLTSPRLTDVQRQILEFTEAKPVDLDIDRMLAEAIEHAGLPGADLDDTH CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH GFVDRLHVHVAAIEADHGLRQLTRGSLRQRVVRLLRNRLSLTELLQRYPEIESIPIEEPL HHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCE IVVGMPRSGTTHLVNLIACDPRRRALPYWESQEPIPARGQGPDVFGVDPRYARAKAERGD EEEECCCCCHHHEEHEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC RGGSGTARPRSGLLRPGMACAGARLARSLPEPGPNPALRLPEEGVAGVDLPARAADLGAQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCH KSAALRAARPADGDLPRCDDRVHAPRPRRGDPVGDHHDGLLGSVAPHQH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA