| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41406324
Identifier: 41406324
GI number: 41406324
Start: 239978
End: 240907
Strand: Direct
Name: 41406324
Synonym: MAP0226
Alternate gene names: NA
Gene position: 239978-240907 (Clockwise)
Preceding gene: 41406319
Following gene: 41406328
Centisome position: 4.97
GC content: 72.47
Gene sequence:
>930_bases TTGGTCGCGGCGAGCGCAATTTCAACGCCTCCGCTGTCAGCCTGGAAGCTCGGCCTAAGGAGCGCTCACATGCACATCGA AATCGGACTGCCCAGCCATATCGCCCACGTGCGGGGGCGGCTGACCGTCGAGTGGGCCCGCCGGGCCGAACACCGCGGCT TTGCCGGCCTGGCCGCGATCGACCGGCTGGTGTACCCGAGCCTCGACGCGATGACCGCGCTCGCGGTGGCCGCGGGCGCG ACCACCGGCATCGGGTTGACGTTCAACGTGCTGCTCGCTCCGCTGTACCCCGCGGTGCTGCTGGCCAAGCAGGTCATCAC CCTCGCGGAGGCGTCCGGCGGCCGGCTGCGCCTGGGGCTGGGCGTCGGGAGCCGCTGCGACGACTACACCGCCGTCGGCG TCGACTATCGGCGGCGCGGGCGCATTCTCGACGAGACGGCGGCGCTGCTGCGTGCCGCGTGTGAGGCCGAGGTGGTGACC GGCGACCAGCCGCTGTGCCCGGCGCCGGTGCGGATCCCGATCCTGTTCGGTGGACGGGCGGACGCGACGATCCGCCGCGC CGTGACCGTCGGTGACGGCTGGACCGCCGGGGCGCTGCGCGATTACGCCAACCAGTCGGTGTTCGCCGAGCGGGTCCGGG CGGCATGGGCGGCGCGGGGCCGCTCCGGACGGCCGTGGCTGCAGGCCAGCGTCAACTTCGCCTTCGGCGATGACGAGGCC GTCGCCGCTGGCCGCAGACACCTGCAGAGCTACTACGGCTTCAAGCCCGACTACGCCGCCCTCAACGTCGCCGACATGCT CACCACGCCGCAGGAGGCGGCGCAGACCGTGCGCGCCTACGCCGACCTGGGCTTCGACCGCCTCGTGTTTCACCCCTGCG TCCCCGACACCGGACAGGTCGACCGGCTGGCCAACGCGGTGCTCGGTTAG
Upstream 100 bases:
>100_bases GGGAGCTAACTGCAGGGCGTGCAGAATCTGTGCGTCTAACTCGTCGGTCATCAGGAAAAGTATCCGCGTGGACAGGTCCA AGTGAGGATTTCAGGCCAAT
Downstream 100 bases:
>100_bases GCGCCCACCGGCACCACGAACTCCGACGTGTAGAACTCGGCCGGATTCTGCGAGTTCGGATTCGGCCGCTCGATGATCAA CCACACCCCGGTGGTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Monooxygenase; Luciferase-Like Monooxygenase
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MVAASAISTPPLSAWKLGLRSAHMHIEIGLPSHIAHVRGRLTVEWARRAEHRGFAGLAAIDRLVYPSLDAMTALAVAAGA TTGIGLTFNVLLAPLYPAVLLAKQVITLAEASGGRLRLGLGVGSRCDDYTAVGVDYRRRGRILDETAALLRAACEAEVVT GDQPLCPAPVRIPILFGGRADATIRRAVTVGDGWTAGALRDYANQSVFAERVRAAWAARGRSGRPWLQASVNFAFGDDEA VAAGRRHLQSYYGFKPDYAALNVADMLTTPQEAAQTVRAYADLGFDRLVFHPCVPDTGQVDRLANAVLG
Sequences:
>Translated_309_residues MVAASAISTPPLSAWKLGLRSAHMHIEIGLPSHIAHVRGRLTVEWARRAEHRGFAGLAAIDRLVYPSLDAMTALAVAAGA TTGIGLTFNVLLAPLYPAVLLAKQVITLAEASGGRLRLGLGVGSRCDDYTAVGVDYRRRGRILDETAALLRAACEAEVVT GDQPLCPAPVRIPILFGGRADATIRRAVTVGDGWTAGALRDYANQSVFAERVRAAWAARGRSGRPWLQASVNFAFGDDEA VAAGRRHLQSYYGFKPDYAALNVADMLTTPQEAAQTVRAYADLGFDRLVFHPCVPDTGQVDRLANAVLG >Mature_309_residues MVAASAISTPPLSAWKLGLRSAHMHIEIGLPSHIAHVRGRLTVEWARRAEHRGFAGLAAIDRLVYPSLDAMTALAVAAGA TTGIGLTFNVLLAPLYPAVLLAKQVITLAEASGGRLRLGLGVGSRCDDYTAVGVDYRRRGRILDETAALLRAACEAEVVT GDQPLCPAPVRIPILFGGRADATIRRAVTVGDGWTAGALRDYANQSVFAERVRAAWAARGRSGRPWLQASVNFAFGDDEA VAAGRRHLQSYYGFKPDYAALNVADMLTTPQEAAQTVRAYADLGFDRLVFHPCVPDTGQVDRLANAVLG
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32938; Mature: 32938
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAASAISTPPLSAWKLGLRSAHMHIEIGLPSHIAHVRGRLTVEWARRAEHRGFAGLAAI CCCCCCCCCCCHHHHHHHHCEEEEEEEECCCHHHHHHHCCEEEHHHHHHHCCCCHHHHHH DRLVYPSLDAMTALAVAAGATTGIGLTFNVLLAPLYPAVLLAKQVITLAEASGGRLRLGL HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE GVGSRCDDYTAVGVDYRRRGRILDETAALLRAACEAEVVTGDQPLCPAPVRIPILFGGRA CCCCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEECCCC DATIRRAVTVGDGWTAGALRDYANQSVFAERVRAAWAARGRSGRPWLQASVNFAFGDDEA CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHH VAAGRRHLQSYYGFKPDYAALNVADMLTTPQEAAQTVRAYADLGFDRLVFHPCVPDTGQV HHHHHHHHHHHCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH DRLANAVLG HHHHHHHCC >Mature Secondary Structure MVAASAISTPPLSAWKLGLRSAHMHIEIGLPSHIAHVRGRLTVEWARRAEHRGFAGLAAI CCCCCCCCCCCHHHHHHHHCEEEEEEEECCCHHHHHHHCCEEEHHHHHHHCCCCHHHHHH DRLVYPSLDAMTALAVAAGATTGIGLTFNVLLAPLYPAVLLAKQVITLAEASGGRLRLGL HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE GVGSRCDDYTAVGVDYRRRGRILDETAALLRAACEAEVVTGDQPLCPAPVRIPILFGGRA CCCCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEECCCC DATIRRAVTVGDGWTAGALRDYANQSVFAERVRAAWAARGRSGRPWLQASVNFAFGDDEA CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHH VAAGRRHLQSYYGFKPDYAALNVADMLTTPQEAAQTVRAYADLGFDRLVFHPCVPDTGQV HHHHHHHHHHHCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH DRLANAVLG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA