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The map label for this gene is embR_1

Identifier: 41406328

GI number: 41406328

Start: 248277

End: 249416

Strand: Direct

Name: embR_1

Synonym: MAP0230

Alternate gene names: 41406328

Gene position: 248277-249416 (Clockwise)

Preceding gene: 41406324

Following gene: 41406342

Centisome position: 5.14

GC content: 71.49

Gene sequence:

>1140_bases
CTGGGGTTCGGTGTCCTGGGTCCGTTGTCGGTGACCGCCGGCGGCGCCCAGCTGCCGTTGGGTGCGCCCAAACAGCGGGC
GGTGCTGGCCATGCTGCTGATCCACCGCAACCGGCCGGTGTCCGTCGACGCGTTGATCGACGGGGTGTGGGGCGCGGCGC
CGGTGCCGGCGGCGCGCACCAGCATCCAGTCCTATGTGTCCACCCTGCGCCGGCTGCTGCGCAGCGCGTTGCCCAACCCC
AACGGGTTGCTGGCCAGTGTCCCGCCCGGCTACCAGCTCAACGTCGCCGACGCGGACTGCGACCTGGGACGCTTCCGCGG
GCACAAGACCGCGGGGGTGCAGGCCGCCAGCCGGGGACGCTTCGAGGAGGCCAGCGGCCACCTGGCGGCGGCGCTGCGCG
AATGGCGCGGACCGGTGCTCGACGACCTCCACAACTTCGCGTTCGTCGACGCGTTCGCCAACCTGCTGCTCGAGGAGCGC
GTCGCGGCGCACACCGCCCGCGCCGAGGCCGAGATCGCCTGCGGGCGCGCCGATGGCGTCATCGGGGAGCTCGAGGCGCT
GGTCGCCCAGCATCCCTACCGCGAACCGCTGTGGGCGCAACTGATCACCGCCTACTACGTCACCGAACGCCAATCCGATG
CGCTCGGCGCCTACCGGCGGCTCAAGACCGCGCTGGCCGAGGGGCTGGGCATCGACCCGGGGCCCACCGTCAAGGCGCTG
CAGCAGCGCATCCTGCGCCAGGAGCCGCTCGGGCCCGGGCAGCCCGGGAAGGCCGCCAGGCGGGCGATGCTGAGCACCCA
CAAGCAGAGCACGGTGCGGTCCGAGTCGGCGGCGGCGGTGATCGACAATCCCGTCGTCGCCCGGTTGCGGGACAAGGCCG
GGCGCCACTATCAGCTCAACGGGGTGACCACCCGGATCGGCCGGCTCGACGACAACGAGATCGTGCTGGACGACACCGAG
GTCAGCCGCCACCACGCCGTCATCATCGACACCGGAACGGATTTCCTGATCACCGACATGAAATCGACCAACGGCGTCCA
GGTGCGGGGCCGGCGGGTGCAGCGCAGCGCCACCCTGGTCGACGGCGACCACATCTGCATCGGCAACTCCGAGTTCGTCT
TCGAAATCCGGCCCGCCTGA

Upstream 100 bases:

>100_bases
TGATTCACAGCGAACATCCGCCCGCCAATTCAGCATTCGCCGCGTGCGTGCGGTCAAAATGGACTGCTGAGGAGGCTGAC
AGCGCGTGGCGAACGCAGGT

Downstream 100 bases:

>100_bases
ACGCTATTGGCCGAGCCGGGCGGCCAGCGTGGCGCGCCCCGGCCCGTCCAGATCGGCCAGCGCGGCCGGGCGCCCCGACA
TCGCCATCAGCAGCGCCTCG

Product: EmbR_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MGFGVLGPLSVTAGGAQLPLGAPKQRAVLAMLLIHRNRPVSVDALIDGVWGAAPVPAARTSIQSYVSTLRRLLRSALPNP
NGLLASVPPGYQLNVADADCDLGRFRGHKTAGVQAASRGRFEEASGHLAAALREWRGPVLDDLHNFAFVDAFANLLLEER
VAAHTARAEAEIACGRADGVIGELEALVAQHPYREPLWAQLITAYYVTERQSDALGAYRRLKTALAEGLGIDPGPTVKAL
QQRILRQEPLGPGQPGKAARRAMLSTHKQSTVRSESAAAVIDNPVVARLRDKAGRHYQLNGVTTRIGRLDDNEIVLDDTE
VSRHHAVIIDTGTDFLITDMKSTNGVQVRGRRVQRSATLVDGDHICIGNSEFVFEIRPA

Sequences:

>Translated_379_residues
MGFGVLGPLSVTAGGAQLPLGAPKQRAVLAMLLIHRNRPVSVDALIDGVWGAAPVPAARTSIQSYVSTLRRLLRSALPNP
NGLLASVPPGYQLNVADADCDLGRFRGHKTAGVQAASRGRFEEASGHLAAALREWRGPVLDDLHNFAFVDAFANLLLEER
VAAHTARAEAEIACGRADGVIGELEALVAQHPYREPLWAQLITAYYVTERQSDALGAYRRLKTALAEGLGIDPGPTVKAL
QQRILRQEPLGPGQPGKAARRAMLSTHKQSTVRSESAAAVIDNPVVARLRDKAGRHYQLNGVTTRIGRLDDNEIVLDDTE
VSRHHAVIIDTGTDFLITDMKSTNGVQVRGRRVQRSATLVDGDHICIGNSEFVFEIRPA
>Mature_378_residues
GFGVLGPLSVTAGGAQLPLGAPKQRAVLAMLLIHRNRPVSVDALIDGVWGAAPVPAARTSIQSYVSTLRRLLRSALPNPN
GLLASVPPGYQLNVADADCDLGRFRGHKTAGVQAASRGRFEEASGHLAAALREWRGPVLDDLHNFAFVDAFANLLLEERV
AAHTARAEAEIACGRADGVIGELEALVAQHPYREPLWAQLITAYYVTERQSDALGAYRRLKTALAEGLGIDPGPTVKALQ
QRILRQEPLGPGQPGKAARRAMLSTHKQSTVRSESAAAVIDNPVVARLRDKAGRHYQLNGVTTRIGRLDDNEIVLDDTEV
SRHHAVIIDTGTDFLITDMKSTNGVQVRGRRVQRSATLVDGDHICIGNSEFVFEIRPA

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR000253
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR008984
- InterPro:   IPR011990
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00498 FHA; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 40828; Mature: 40697

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50006 FHA_DOMAIN ; PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFGVLGPLSVTAGGAQLPLGAPKQRAVLAMLLIHRNRPVSVDALIDGVWGAAPVPAART
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHH
SIQSYVSTLRRLLRSALPNPNGLLASVPPGYQLNVADADCDLGRFRGHKTAGVQAASRGR
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCHHHHCCCCCCCCCHHHCCC
FEEASGHLAAALREWRGPVLDDLHNFAFVDAFANLLLEERVAAHTARAEAEIACGRADGV
CHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCH
IGELEALVAQHPYREPLWAQLITAYYVTERQSDALGAYRRLKTALAEGLGIDPGPTVKAL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QQRILRQEPLGPGQPGKAARRAMLSTHKQSTVRSESAAAVIDNPVVARLRDKAGRHYQLN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCEEEEC
GVTTRIGRLDDNEIVLDDTEVSRHHAVIIDTGTDFLITDMKSTNGVQVRGRRVQRSATLV
CCEEEECCCCCCCEEEECCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCHHCCEEEE
DGDHICIGNSEFVFEIRPA
CCCEEEECCCEEEEEECCC
>Mature Secondary Structure 
GFGVLGPLSVTAGGAQLPLGAPKQRAVLAMLLIHRNRPVSVDALIDGVWGAAPVPAART
CCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHH
SIQSYVSTLRRLLRSALPNPNGLLASVPPGYQLNVADADCDLGRFRGHKTAGVQAASRGR
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCHHHHCCCCCCCCCHHHCCC
FEEASGHLAAALREWRGPVLDDLHNFAFVDAFANLLLEERVAAHTARAEAEIACGRADGV
CHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCH
IGELEALVAQHPYREPLWAQLITAYYVTERQSDALGAYRRLKTALAEGLGIDPGPTVKAL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QQRILRQEPLGPGQPGKAARRAMLSTHKQSTVRSESAAAVIDNPVVARLRDKAGRHYQLN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCEEEEC
GVTTRIGRLDDNEIVLDDTEVSRHHAVIIDTGTDFLITDMKSTNGVQVRGRRVQRSATLV
CCEEEECCCCCCCEEEECCCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCHHCCEEEE
DGDHICIGNSEFVFEIRPA
CCCEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]