Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41406313

Identifier: 41406313

GI number: 41406313

Start: 220723

End: 222642

Strand: Direct

Name: 41406313

Synonym: MAP0215

Alternate gene names: NA

Gene position: 220723-222642 (Clockwise)

Preceding gene: 41406312

Following gene: 41406314

Centisome position: 4.57

GC content: 72.24

Gene sequence:

>1920_bases
ATGAGGCGGCCCGGCTGGCCGGTGTTCCCGTACACGACGATGGTGCGCTCGAGCCTGTGGATCGGCGTGGCGGTGGTTGC
CGTGCTGTTCGCCTGGGGCGGCTGGCAGCGGCGCTGGATCGCCGACGACGGGCTGATCGTGCTGCGCACCGTGCGCAACC
TGCTGGCCGGCAACGGGCCGGTGTTCAACCAGGGCGAGCGGGTGGAGGCCAACACTTCGACGGCGTGGACGTATCTGATG
TACGCCGGCAGCTGGGTGGGCGGCCCGCTGCGGATGGAGTACGTGGCGCTGGCGCTGGCGCTGACGCTTTCGGTGCTCGG
GGTGGCGCTGCTGATGCTGGGCGCGGCGCGACTGTACGCGCCCAGCCTGCGCGGCCGCCGGGCGATCATGCTGCCCGCCG
GGGCGCTGGTCTACATCGCGCTGCCGCCGTCGCGGGACTTCGCCACCTCCGGCCTGGAAAGCGGTTTGGCCCTGGCCTAC
CTGGGGTTGCTGTGGTGGATGATGGTGTGCTGGGCGCAGCCGGTGCGCAACCGGCCGGACCGCCGGGAGTTCGCCGGTGC
GCTGGCGTTCGTCGCCGGGTTCAGCGTCCTGGTGCGTCCGGAGCTGGCGCTGATGGGCGGGCTGGCGCTGATCATGATGC
TGGTCGCGGCCCGCACCTGGCGGCGCCGGGCGCTGATCGTCGCCGCCGGGGGTGCGCTGCCGGTGGCCTACGAGATCTTC
CGGATGGGCTACTACGGCCTGCTGGTGCCGGGCACCGCCCTGGCCAAGGACGCCGCCGGGGACAAGTGGTCGCAGGGCAT
GACCTACCTGTCCAACTTCGACGCGCCGTACCTGGTGTGGGTTCCCGCGGTGCTGCTGGTGCTGCTCGGGGTGCTGCTGG
CGGCCGCCCGCCGGCGGCCGTCGTTCCTGCGGCCCCCGCTGGCGCCCAACTACGGCCGGGTGGCCCGGGCGGTGCACAGC
CCGCCGGCGGTGGTGGCCTGGGTGCTGGTCAGCGGCCTGCTGCAGGCCCTGTACTGGATTCGCCAGGGCGGGGACTTCAT
GCACGCCCGGGTGCTGCTGGCGCCGCTGTTCTGCCTGCTGGCCCCGGTGGCCGTCGTCCCGGTGATGGTGCCCGACGGCC
AGGACTACTCCCGCGAGACCGGCAACTGGGTGGCCGGCGCGGCCTGCGCGCTGTGGCTCGGGATCGCCGGATGGGCGCTG
TGGGCGGCCAACTCGCCCGGCATGGGCGACGACGCCACGCACGTCACCTACTCCGGGATCGTCGACGAACGCCGCTTCTA
CGCCCAGGCCACCGGCCACGCGCACCCGCTGACCGCCGCCGACTACCTGGGCTATCCGCGGATGGCCGCCATCCTGACCG
CGCTGAACAACACCCCCGAGGGCGCGCTGCTGCTGCCGTCGGGCAACTACACCCAGTGGGACCTGGTGCCGATGGCCCAG
CCGCCGCCCGGCACCACCCCCGACAAGTTTCCGCAAAAGCCGCAGCACACCGTCTTTTTCACCAACCTGGGCATGGTGGG
GATGAACGTCGGGCTCGACGTCCGGGTGATCGACCAGATTGGTCTGGCGAATCCGCTGGCGCAGCACACCGAACGCCTCA
AGCACGGCCGGATCGGGCACGACAAGAACCTGTTCCCGGACTGGGTGATCGCCGACGGGCCCTGGGTGAAGGTGTATCCG
GGGATCCCGGGTTACCTGGACGCGCAGTGGGTCGCCGAGGCCGTCTCGGCGCTGCAGTGCCCGGACACCCGGGCGGTGCT
GGCCTCGGTGCGGGCCCCGATGACCCCGCACCGGTTCCTGTCCAACGCGCTGCACTCCTTCCAATTCACCGGCTACCGGA
TCGACCGGGTGCCGCGCTACGAGCTCGCCCGCTGCGGGCTGCCGGTGCCGGAGGAAGCGCCACCGCCGCCGCGCGAGTGA

Upstream 100 bases:

>100_bases
CTGGCGCTGGCGTGGATGGTGACGGTCGGAGCCGCCGTTGCCTTCGGTTAGCCCCGAACTGCAGGCGCTCAAGGCGCGCA
TCATGGGCAGCCGGCCGGTG

Downstream 100 bases:

>100_bases
GCGCCGCGCAGAAGAATTTTCGGCCGATCCGCCACCGGTCGGGCCGCGGCGTCCGCGACAAATTGGCAGCAACATCACAT
CTGACCCCCGACCAGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Arabinosyltransferase AftB; Integral Membrane Protein

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MRRPGWPVFPYTTMVRSSLWIGVAVVAVLFAWGGWQRRWIADDGLIVLRTVRNLLAGNGPVFNQGERVEANTSTAWTYLM
YAGSWVGGPLRMEYVALALALTLSVLGVALLMLGAARLYAPSLRGRRAIMLPAGALVYIALPPSRDFATSGLESGLALAY
LGLLWWMMVCWAQPVRNRPDRREFAGALAFVAGFSVLVRPELALMGGLALIMMLVAARTWRRRALIVAAGGALPVAYEIF
RMGYYGLLVPGTALAKDAAGDKWSQGMTYLSNFDAPYLVWVPAVLLVLLGVLLAAARRRPSFLRPPLAPNYGRVARAVHS
PPAVVAWVLVSGLLQALYWIRQGGDFMHARVLLAPLFCLLAPVAVVPVMVPDGQDYSRETGNWVAGAACALWLGIAGWAL
WAANSPGMGDDATHVTYSGIVDERRFYAQATGHAHPLTAADYLGYPRMAAILTALNNTPEGALLLPSGNYTQWDLVPMAQ
PPPGTTPDKFPQKPQHTVFFTNLGMVGMNVGLDVRVIDQIGLANPLAQHTERLKHGRIGHDKNLFPDWVIADGPWVKVYP
GIPGYLDAQWVAEAVSALQCPDTRAVLASVRAPMTPHRFLSNALHSFQFTGYRIDRVPRYELARCGLPVPEEAPPPPRE

Sequences:

>Translated_639_residues
MRRPGWPVFPYTTMVRSSLWIGVAVVAVLFAWGGWQRRWIADDGLIVLRTVRNLLAGNGPVFNQGERVEANTSTAWTYLM
YAGSWVGGPLRMEYVALALALTLSVLGVALLMLGAARLYAPSLRGRRAIMLPAGALVYIALPPSRDFATSGLESGLALAY
LGLLWWMMVCWAQPVRNRPDRREFAGALAFVAGFSVLVRPELALMGGLALIMMLVAARTWRRRALIVAAGGALPVAYEIF
RMGYYGLLVPGTALAKDAAGDKWSQGMTYLSNFDAPYLVWVPAVLLVLLGVLLAAARRRPSFLRPPLAPNYGRVARAVHS
PPAVVAWVLVSGLLQALYWIRQGGDFMHARVLLAPLFCLLAPVAVVPVMVPDGQDYSRETGNWVAGAACALWLGIAGWAL
WAANSPGMGDDATHVTYSGIVDERRFYAQATGHAHPLTAADYLGYPRMAAILTALNNTPEGALLLPSGNYTQWDLVPMAQ
PPPGTTPDKFPQKPQHTVFFTNLGMVGMNVGLDVRVIDQIGLANPLAQHTERLKHGRIGHDKNLFPDWVIADGPWVKVYP
GIPGYLDAQWVAEAVSALQCPDTRAVLASVRAPMTPHRFLSNALHSFQFTGYRIDRVPRYELARCGLPVPEEAPPPPRE
>Mature_639_residues
MRRPGWPVFPYTTMVRSSLWIGVAVVAVLFAWGGWQRRWIADDGLIVLRTVRNLLAGNGPVFNQGERVEANTSTAWTYLM
YAGSWVGGPLRMEYVALALALTLSVLGVALLMLGAARLYAPSLRGRRAIMLPAGALVYIALPPSRDFATSGLESGLALAY
LGLLWWMMVCWAQPVRNRPDRREFAGALAFVAGFSVLVRPELALMGGLALIMMLVAARTWRRRALIVAAGGALPVAYEIF
RMGYYGLLVPGTALAKDAAGDKWSQGMTYLSNFDAPYLVWVPAVLLVLLGVLLAAARRRPSFLRPPLAPNYGRVARAVHS
PPAVVAWVLVSGLLQALYWIRQGGDFMHARVLLAPLFCLLAPVAVVPVMVPDGQDYSRETGNWVAGAACALWLGIAGWAL
WAANSPGMGDDATHVTYSGIVDERRFYAQATGHAHPLTAADYLGYPRMAAILTALNNTPEGALLLPSGNYTQWDLVPMAQ
PPPGTTPDKFPQKPQHTVFFTNLGMVGMNVGLDVRVIDQIGLANPLAQHTERLKHGRIGHDKNLFPDWVIADGPWVKVYP
GIPGYLDAQWVAEAVSALQCPDTRAVLASVRAPMTPHRFLSNALHSFQFTGYRIDRVPRYELARCGLPVPEEAPPPPRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69662; Mature: 69662

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPGWPVFPYTTMVRSSLWIGVAVVAVLFAWGGWQRRWIADDGLIVLRTVRNLLAGNGP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCC
VFNQGERVEANTSTAWTYLMYAGSWVGGPLRMEYVALALALTLSVLGVALLMLGAARLYA
CCCCCCEEECCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSLRGRRAIMLPAGALVYIALPPSRDFATSGLESGLALAYLGLLWWMMVCWAQPVRNRPD
CCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
RREFAGALAFVAGFSVLVRPELALMGGLALIMMLVAARTWRRRALIVAAGGALPVAYEIF
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHH
RMGYYGLLVPGTALAKDAAGDKWSQGMTYLSNFDAPYLVWVPAVLLVLLGVLLAAARRRP
HHCCCCEECCCHHHHHHCCCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SFLRPPLAPNYGRVARAVHSPPAVVAWVLVSGLLQALYWIRQGGDFMHARVLLAPLFCLL
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
APVAVVPVMVPDGQDYSRETGNWVAGAACALWLGIAGWALWAANSPGMGDDATHVTYSGI
HHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCH
VDERRFYAQATGHAHPLTAADYLGYPRMAAILTALNNTPEGALLLPSGNYTQWDLVPMAQ
HHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCC
PPPGTTPDKFPQKPQHTVFFTNLGMVGMNVGLDVRVIDQIGLANPLAQHTERLKHGRIGH
CCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEHHHHCCCCHHHHHHHHHHCCCCCC
DKNLFPDWVIADGPWVKVYPGIPGYLDAQWVAEAVSALQCPDTRAVLASVRAPMTPHRFL
CCCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
SNALHSFQFTGYRIDRVPRYELARCGLPVPEEAPPPPRE
HHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRPGWPVFPYTTMVRSSLWIGVAVVAVLFAWGGWQRRWIADDGLIVLRTVRNLLAGNGP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCC
VFNQGERVEANTSTAWTYLMYAGSWVGGPLRMEYVALALALTLSVLGVALLMLGAARLYA
CCCCCCEEECCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSLRGRRAIMLPAGALVYIALPPSRDFATSGLESGLALAYLGLLWWMMVCWAQPVRNRPD
CCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
RREFAGALAFVAGFSVLVRPELALMGGLALIMMLVAARTWRRRALIVAAGGALPVAYEIF
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHH
RMGYYGLLVPGTALAKDAAGDKWSQGMTYLSNFDAPYLVWVPAVLLVLLGVLLAAARRRP
HHCCCCEECCCHHHHHHCCCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SFLRPPLAPNYGRVARAVHSPPAVVAWVLVSGLLQALYWIRQGGDFMHARVLLAPLFCLL
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
APVAVVPVMVPDGQDYSRETGNWVAGAACALWLGIAGWALWAANSPGMGDDATHVTYSGI
HHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCH
VDERRFYAQATGHAHPLTAADYLGYPRMAAILTALNNTPEGALLLPSGNYTQWDLVPMAQ
HHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCC
PPPGTTPDKFPQKPQHTVFFTNLGMVGMNVGLDVRVIDQIGLANPLAQHTERLKHGRIGH
CCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEHHHHCCCCHHHHHHHHHHCCCCCC
DKNLFPDWVIADGPWVKVYPGIPGYLDAQWVAEAVSALQCPDTRAVLASVRAPMTPHRFL
CCCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
SNALHSFQFTGYRIDRVPRYELARCGLPVPEEAPPPPRE
HHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA