| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406312
Identifier: 41406312
GI number: 41406312
Start: 219756
End: 220673
Strand: Direct
Name: 41406312
Synonym: MAP0214
Alternate gene names: NA
Gene position: 219756-220673 (Clockwise)
Preceding gene: 41406311
Following gene: 41406313
Centisome position: 4.55
GC content: 69.06
Gene sequence:
>918_bases ATGACCGAGGAAACGCAGGAAGCGGTGGCCGGACCGCCGGCCAACGTGGTCTCCGGGGTGATCAAGGCGATCCGCCCCCG GCAATGGGTGAAGAACGTGCTGGTGCTGCTGGCGCCGGTGGCGGCGCTGGGCGGCCCGGTCCAGTACGACTACACCGACG TGCTGGGCAAGGTGTCGGTGGCGTTCGTGGTGTTCTCCCTGGCCGCCTCGTCGATCTACCTGGTCAACGACGCGCGCGAC GTCGAGGCCGACCGCGAGCACCCCACCAAGCGGTTCCGGCCGATCGCGGCCGGCGTGGTGCCCGAATGGCTGGCCTACAC CCTGGCCGTGCTGCTGGCGGCGGCGTCGCTGGGCATCGGCTGGTGGCTGACCCCGAACCTGGCGGCGGTGATGGCCGTCT ACATCGCCATCCAGCTGGCCTACTGCTTCGGCCTCAAACACCAAGCGGTGATGGACATCTGCATCGTGTCGTCGGGGTTC CTGCTGCGCGCCATCGCCGGCGGCGCGGCCACCAACATCCGGCTCACCCAATGGTTCCTGCTGATGATGGCGTTCGGGTC GCTGTTCATGGCGGCCGGCAAGCGCTACGCCGAGCTGCAACTGGCCGAGCGGACCGGGGCGAAGATCCGCAAGGCGCTGG AGAGCTACACCAGCACCTACCTGCGGTTCGTCTGGACGTTGTCGGCCACCGCGCTGGTGGTCTGCTACGGGCTGTGGGCC TTCGACCGCGAGCACGGCGAGGCGCGCTGGTTCGTGGTGTCCATGGTCCCGTTCACCATCGCGATCCTGCGCTACGCGGT CGACGTGGACGGCGGGCTGGCCGGGGAGCCCGAGGACATCGTGCTGCGTGACCGGGTGTTCCAGCTCCTGGCGCTGGCGT GGATGGTGACGGTCGGAGCCGCCGTTGCCTTCGGTTAG
Upstream 100 bases:
>100_bases TGGGGGTGCACTATCCCAGCGACGTGGCCTGCGGCATCGCCCTGGGGGCCGGCGTCGCCGCCGTCGCGCGCCGCGCACCG CAGCTGGCAAGAGGTGACCA
Downstream 100 bases:
>100_bases CCCCGAACTGCAGGCGCTCAAGGCGCGCATCATGGGCAGCCGGCCGGTGATGAGGCGGCCCGGCTGGCCGGTGTTCCCGT ACACGACGATGGTGCGCTCG
Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTEETQEAVAGPPANVVSGVIKAIRPRQWVKNVLVLLAPVAALGGPVQYDYTDVLGKVSVAFVVFSLAASSIYLVNDARD VEADREHPTKRFRPIAAGVVPEWLAYTLAVLLAAASLGIGWWLTPNLAAVMAVYIAIQLAYCFGLKHQAVMDICIVSSGF LLRAIAGGAATNIRLTQWFLLMMAFGSLFMAAGKRYAELQLAERTGAKIRKALESYTSTYLRFVWTLSATALVVCYGLWA FDREHGEARWFVVSMVPFTIAILRYAVDVDGGLAGEPEDIVLRDRVFQLLALAWMVTVGAAVAFG
Sequences:
>Translated_305_residues MTEETQEAVAGPPANVVSGVIKAIRPRQWVKNVLVLLAPVAALGGPVQYDYTDVLGKVSVAFVVFSLAASSIYLVNDARD VEADREHPTKRFRPIAAGVVPEWLAYTLAVLLAAASLGIGWWLTPNLAAVMAVYIAIQLAYCFGLKHQAVMDICIVSSGF LLRAIAGGAATNIRLTQWFLLMMAFGSLFMAAGKRYAELQLAERTGAKIRKALESYTSTYLRFVWTLSATALVVCYGLWA FDREHGEARWFVVSMVPFTIAILRYAVDVDGGLAGEPEDIVLRDRVFQLLALAWMVTVGAAVAFG >Mature_304_residues TEETQEAVAGPPANVVSGVIKAIRPRQWVKNVLVLLAPVAALGGPVQYDYTDVLGKVSVAFVVFSLAASSIYLVNDARDV EADREHPTKRFRPIAAGVVPEWLAYTLAVLLAAASLGIGWWLTPNLAAVMAVYIAIQLAYCFGLKHQAVMDICIVSSGFL LRAIAGGAATNIRLTQWFLLMMAFGSLFMAAGKRYAELQLAERTGAKIRKALESYTSTYLRFVWTLSATALVVCYGLWAF DREHGEARWFVVSMVPFTIAILRYAVDVDGGLAGEPEDIVLRDRVFQLLALAWMVTVGAAVAFG
Specific function: Possible permease/transporter [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 33151; Mature: 33020
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEETQEAVAGPPANVVSGVIKAIRPRQWVKNVLVLLAPVAALGGPVQYDYTDVLGKVSV CCCCHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AFVVFSLAASSIYLVNDARDVEADREHPTKRFRPIAAGVVPEWLAYTLAVLLAAASLGIG HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WWLTPNLAAVMAVYIAIQLAYCFGLKHQAVMDICIVSSGFLLRAIAGGAATNIRLTQWFL EEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH LMMAFGSLFMAAGKRYAELQLAERTGAKIRKALESYTSTYLRFVWTLSATALVVCYGLWA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDREHGEARWFVVSMVPFTIAILRYAVDVDGGLAGEPEDIVLRDRVFQLLALAWMVTVGA HHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVAFG HHHCC >Mature Secondary Structure TEETQEAVAGPPANVVSGVIKAIRPRQWVKNVLVLLAPVAALGGPVQYDYTDVLGKVSV CCCHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AFVVFSLAASSIYLVNDARDVEADREHPTKRFRPIAAGVVPEWLAYTLAVLLAAASLGIG HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WWLTPNLAAVMAVYIAIQLAYCFGLKHQAVMDICIVSSGFLLRAIAGGAATNIRLTQWFL EEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH LMMAFGSLFMAAGKRYAELQLAERTGAKIRKALESYTSTYLRFVWTLSATALVVCYGLWA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDREHGEARWFVVSMVPFTIAILRYAVDVDGGLAGEPEDIVLRDRVFQLLALAWMVTVGA HHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVAFG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]